BAC Information

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BAC

Clone NameB6Ng01-045B17
Chromosome5 (Build37)
Map Location 60,170,018 - 60,170,554
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041396, LOC666499, EG625870, LOC100041425
Downstream geneLOC546866, Cbfa2t2-ps1, LOC100041498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045B17.bB6Ng01-045B17.g
ACCDH870660DH870661
length1,265531
definitionDH870660|Mus musculus domesticus DNA, BAC clone: B6Ng01-045B17, 5' end.DH870661|Mus musculus domesticus DNA, BAC clone: B6Ng01-045B17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaactatttctcactccatcttgtggtttctctgagaactgta
aatagttctgcctgaaaaactagctacaccactcctgggcatatatccaa
aagaagtttaactataccacaagaccaggtgctccactgtgtttataaca
gtcttattcataatagccagatactgaaagcaacataaaatacctcacct
gcagaatggattcagaaattatggttcatttacaatttggaatattactc
agctattaaaaaaacaaagacattatgaattttgcagtcaaatggatgga
accagaaaatatcctgagtgatgtagcccaaaatcaaaattacatgcatg
ggctatactcactgataagtggatattagtcaaaaagtccagaataccaa
tgatacatcctacaaaaacaaacaagttaaataatgaggaatgcccaagt
gaagatgcttaaattcctcttagaagggggaacaaaaataatcatgttag
gcagaagggaggaaaggacctgggtagtagagaagagcgggacaggatta
ggtatgaggagagacaaagaaaagtctcagaggaccataagaatgtatag
aaatatgcagctaccagggtaggaatggggctactctctaggaagtccca
gagacctggaacataggaggctcctaggactcatatgggggtgagcttaa
ctgagatgaccagcatttggaatatggaatgtgaaaggccacctccagta
gccagacagaactcccagtgagagatggggacaccacccacctacaaaat
tactagatgaaatgtatggacaaaaatgaagcagatattgaaggacttgg
caaccagtgacaggcccaacttggcatctgggcaggcactaattactgat
attatggctcatgctgtttgtgcttttagacaggaacctagcacagctgt
cccctgagagctctcctgagcacctgactgagacagatgcagatacagac
agcattagactgaggtcagagacactttggaaaagttagagcaagagtta
tggaactgaaaggaatggaagaagaagaaggacaatgacccacatgatga
ccaagaagaggatgccttctacttcagccagtttggcccacacctgtcct
ggtaactcagctcgagaaactgtacacgcctttgttgtgtagctggtcaa
tgggttattaatggtctcgggcctatctacctatctcagggatgggtaga
ctcaccaccccgtga
actctgtagaccaggctgacctcaaactcagaaatccacctgcctctgcc
tcctgagtgctgggattaaaggggtacatcacatgcctggcttaaattat
ctttttctaatgtttccttggttattattttttcaaagcaatataatcaa
ctgatatacatatgtatgcatatatattatttgcacatatatgtatgtat
atgcatacatatgcacacatacacatatataatatgaaataattcaagaa
aacaaaatttaaatttgaagattaatatgagtgggaaatatgtatggaag
gtttggggataaggaaagagaggaatagtgcaattatattacaatgtatt
ttttctttttttttaagatttatttatttattatatgtaagtacactgta
gctgtcttcagacactccagaagagggagtcagatcttgctacagatggt
tgtgatccaccatgtggttgctgggatttgaactccgggcctttggaaga
gcagtcgggtgctcttacccactgagccatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60170018_60170554
seq2: B6Ng01-045B17.g_65_601

seq1  GAATTCACTCTGTAGACCAGGCTGACCTCAAACTCAGAAATCCACCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGACCTCAAACTCAGAAATCCACCTGCC  50

seq1  TCTGCCTCCTGAGTGCTGGGATTAAAGGGGTACATCACATGCCTGGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTCCTGAGTGCTGGGATTAAAGGGGTACATCACATGCCTGGCTTA  100

seq1  AATTATCTTTTTCTAATGTTTCCTTGGTTATTATTTTTTCAAAGCAATAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCTTTTTCTAATGTTTCCTTGGTTATTATTTTTTCAAAGCAATAT  150

seq1  AATCAACTGATATACATATGTATGCATATATATTATTTGCACATATATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTGATATACATATGTATGCATATATATTATTTGCACATATATGT  200

seq1  ATGTATATGCATACATATGCACACATACACATATATAATATGAAATAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATGCATACATATGCACACATACACATATATAATATGAAATAATT  250

seq1  CAAGAAAACAAAATTTAAATTTGAAGATTAATATGAGTGGGAAATATGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAAACAAAATTTAAATTTGAAGATTAATATGAGTGGGAAATATGTA  300

seq1  TGGAAGGTTTGGGGATAAGGAAAGAGAGGAATAGTGCAATTATATTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGGTTTGGGGATAAGGAAAGAGAGGAATAGTGCAATTATATTACAA  350

seq1  TGTATTTTTTCTTTTTTTTTAAGATTTATTTATTTATTATATGTAAGTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTTCTTTTTTTTTAAGATTTATTTATTTATTATATGTAAGTAC  400

seq1  ACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTTGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAGCTGTCTTCAGACACTCCAGAAGAGGGAGTCAGATCTTGCTACA  450

seq1  GATGGTTGTGATCCACCATGTGGTTGCTGGGATTTGAACTCCGGGCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GATGGTTGTGATCCACCATGTGGTTGCTGGGATTTGAACTCCGGGCCTTT  500

seq1  GGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATC  537
      |||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATC  537