BAC Information

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BAC

Clone NameB6Ng01-045E15
Chromosome5 (Build37)
Map Location 19,791,753 - 19,792,463
singlet/doubletsinglet
Overlap geneMagi2
Upstream genenone
Downstream geneLOC100041850, Phtf2, LOC622367, Tmem60, Rsbn1l, Ptpn12, EG626903, A530088I07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045E15.bB6Ng01-045E15.g
ACCDH870788DH870789
length7101,193
definitionDH870788|Mus musculus domesticus DNA, BAC clone: B6Ng01-045E15, 5' end.DH870789|Mus musculus domesticus DNA, BAC clone: B6Ng01-045E15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagagtgagaaaatgaatgcggtccccaaaagatctcttcctga
agaaatcttttgaggcctgtccattgaagctcgttgtttaaaatggcatt
tctctgctgtttcccattacaccccatcctctgctgggagaacatgcaaa
cctcttgagaaaaatgtgtttacacctttccataggatttactgactggg
ggagtttaggaagcggagacctacatagtcttaatatcagagtagcacaa
acaaacaaatctgtttattttgcctttagcaaggagatatttgttttcta
ggctccaggttttgttttgttttttttttttttccagcgtacccaatgat
ggatgcctgtgttgagtgctttatgactaaaatagaagcaaatcttgggg
ttctctctgacctcaggcagaacttcagagcgaggtggtgtttagggcga
gtgtctgcaggcatgtggatcccaggagcttctgcctgcagtgcgaagtt
tgtaagcacacttgttcctgtgctttgttctcttggcctgtggagttttg
aaagtagcacagaatgtaccagggtaggctcagctggaggtgaccgaaag
gaaaccttgagaaaactggcagagagctctgcactgctgtgaggtagcaa
agctaaaagtgctgaagtcctttgatagggtagtaaattttttctgatga
gtgaagaagg
gaattctttgtttagctctgtaccccatttttaatggggttatttgaatt
tctggagttcagcttcttgacctatatatatatatatatatattggatat
tagtcccctatcagatttaggattggtaaaaattttttcccaatctgttg
gtggcctttttgtcttattgacagtatcttttgccctacagaagcttcgc
acttttatgagatcccattcatggattcttgatcttacagcacagtacat
tgctgttctgtttaggaatttttcccctgtgcccatatctttgagggttt
tccccactttctcctctataaatttcagtgtctctggttttatgtggagt
tctttgatccacttagacttgagctttgtacaaggagataagaatggatc
aattcgcattcttctacatgataaccaccagttgtgccagcaccatttgt
tgaaaatgctatcctttttccactggatggttttagctcccttgtcaaag
atcaggtgaccataggtgtgtgggttcagttccaccagagaactcctaaa
cccgataaacagcttcagtaaagtagctggatataaaattaactcaaaca
aaccagtggcctttctctacacaaaggataaacaggatgagaaagaaatt
agggaaacaacacccttcacaatagtcacaaataatatacaatatcttgg
tgtcactctaactaaggaagtgaaagatctctatgacaagaacttcaagt
ctctgaagaaagaaattgaagaagatctcagaagatgaaaatatctccca
tgttcatggattggcagataaatatagtaaagctggctatcctgccaaaa
gcaatctacagattcaatgcaatcccatcaaaattccaactcaattcttc
actgagtagaaaggcaatttgcaattcttctggaataaggaaaacctagg
atagcaaactattctcaacaataaaagaacctctgcggtatcaccctgcc
tgactctcagctgtattcagagccatgtgtttaaaatgcatgttctggtt
cgaagacgtagtcatggaaagaaatgagacccaaattactccaaccctag
atcctggacttgcatggattagagtctatctctaatcaaagttagtgtca
tcattaagcgaagacactgactgccaacgcaatgcaggctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_19791753_19792463
seq2: B6Ng01-045E15.b_46_755

seq1  GAATTCCAGAGTGAGAAAATGAATGCGGTCCCCAAAAGATCTCTTCCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGTGAGAAAATGAATGCGGTCCCCAAAAGATCTCTTCCTGA  50

seq1  AGAAATCTTTTGAGGCCTGTCCATTGAAGCTCGTTGTTTAAAATGGCATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTTTTGAGGCCTGTCCATTGAAGCTCGTTGTTTAAAATGGCATT  100

seq1  TCTCTGCTGTTTCCCATTACACCCCATCCTCTGCTGGGAGAACATGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGCTGTTTCCCATTACACCCCATCCTCTGCTGGGAGAACATGCAAA  150

seq1  CCTCTTGAGAAAAATGTGTTTACACCTTTCCATAGGATTTACTGACTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTGAGAAAAATGTGTTTACACCTTTCCATAGGATTTACTGACTGGG  200

seq1  GGAGTTTAGGAAGCGGAGACCTACATAGTCTTAATATCAGAGTAGCACAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTTTAGGAAGCGGAGACCTACATAGTCTTAATATCAGAGTAGCACAA  250

seq1  ACAAACAAATCTGTTTATTTTGCCTTTAGCAAGGAGATATTTGTTTTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAATCTGTTTATTTTGCCTTTAGCAAGGAGATATTTGTTTTCTA  300

seq1  GGCTCCAGGTTTTGTTTTGTTTTTTTTTTTTTTCCAGCGTACCCAATGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAGGTTTTGTTTTGTTTTTTTTTTTTTTCCAGCGTACCCAATGAT  350

seq1  GGATGCCTGTGTTGAGTGCTTTATGACTAAAATAGAAGCAAATCTTGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCCTGTGTTGAGTGCTTTATGACTAAAATAGAAGCAAATCTTGGGG  400

seq1  TTCTCTCTGACCTCAGGCAGAACTTCAGAGCGAGGTGGTGTTTAGGGCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTCTGACCTCAGGCAGAACTTCAGAGCGAGGTGGTGTTTAGGGCGA  450

seq1  GTGTCTGCAGGCATGTGGATCCCAGGAGCTTCTGCCTGCAGTGCGAAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGCAGGCATGTGGATCCCAGGAGCTTCTGCCTGCAGTGCGAAGTT  500

seq1  TGTAAGCACACTTGTTCCTGTGCTTTGTTCTCTTGGCCTGTGGAGTTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGCACACTTGTTCCTGTGCTTTGTTCTCTTGGCCTGTGGAGTTTTG  550

seq1  AAAGTAGCACAGAATGTACCAGGGTAGGCTCAGCTGGAGGTGACCGAAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGCACAGAATGTACCAGGGTAGGCTCAGCTGGAGGTGACCGAAAG  600

seq1  GAAACCTTGAGAAAACTGGCAGAGAGCTCTGCACTGCTGTGAGGTAGGCA  650
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAAACCTTGAGAAAACTGGCAGAGAGCTCTGCACTGCTGTGAGGTA-GCA  649

seq1  GAGCTAAAGGTGCTGAGGTCCTCGGATAGGCAAGTAACATTTTTCTGAAG  700
       ||||||| ||||||| |||||  ||||||  |||||  ||||||||| |
seq2  AAGCTAAAAGTGCTGAAGTCCTTTGATAGGGTAGTAAATTTTTTCTGATG  699

seq1  AGTGAAGAAGG  711
      |||||||||||
seq2  AGTGAAGAAGG  710