BAC Information

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BAC

Clone NameB6Ng01-046G24
Chromosome5 (Build37)
Map Location 41,629,291 - 41,629,699
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040502
Downstream geneLOC208522, Rab28, Bapx1, A230054D04Rik, LOC384308, LOC100040588
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046G24.bB6Ng01-046G24.g
ACCDH871604DH871605
length1,129403
definitionDH871604|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G24, 5' end.DH871605|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattctttttaatagttgagtagtactccattgtgtaaatgtacc
acatttttttatccgttcctctgttgaggggcatctgggtactttccagg
ttctggctgggatcctccagtagtaccatgtcaaatttactgaggaacca
ccagactggtttccagagtggttgtacaagcttacaatcccaccaacaat
ggaggagtgttcctctttctccacatcctcaccagcatctgctgtcacct
gaaattttgatattagccattctgactggtgtgagatggaatctcagggt
tgttttgatttgcatttccctgatgattaaggatgttgaacattttttca
ggtgcttctcagccattcggtattcctcaggtgagaattctttgtttagc
tctgagccccatttttaatggggttatttgatttttttggagtccacctt
cttgagttctttatatatattggatattagacctctatctgatttaggat
aggtaaagatccttttccaatctgttggtggtctttttgtcttattgatg
gtgtcttttgccttaaagaagctttgcagtttcatgaggtctcatgtgtc
aattctcgatcttacagcacaagctattgctgttctattcaggaattttt
cccctgtggccatatcttcaaggttttctcctctataagtttcactgtct
ctggttttatgtggagccccttgatccacatagatttgaccttagtacag
gagataggaatggatcaattcacattcttctacatgataaccaccagttg
tgccagcaccattgttgaaatgctgtcttttctccaccggatggttttag
ctcccttgtcaaagatcaagtgaccataggtgtgtgggttcatttctaga
cttcaatctattcattggtctacttgtctgttgctataccagtaccctgc
agttttatgacaatactctgtagtaagcttatgtcaggcatggtgattca
cgagtcttaatctgagagagtatggctttctagattttgtatccaatgaa
ttgcgaattgctcttctactcttaagatgagttggattttagggatgcat
aatctgagatgcgtgacagcgcgaccatg
tgttcctttgtctcagtacataggacttctcctaacagaaaacaatccta
ctatctcttatcatatctcaaacatcctttgctggtgagcttctgcaggc
tgattttcaactcagttcattcccagctcctttgctgggctatgatgtta
ggtttttataaggacaacttgtcacaagttagaatcaactaatctgagat
ccacagccaaggaaatgtgctggttgctgtaattaatttgagaagaccca
ccccaaatatgggcagcgccttctggtagcagcccagaaatgagcatgac
agaaggaagattatttgtcttcagagtcctctttctcttcctcttcgtgt
acccctcccatctccatctcctctctctctctctctctctctctctctct
ctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_41629291_41629699
seq2: B6Ng01-046G24.g_69_477 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGATGGAGATGGGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAGATGGAGATGGGAGG  50

seq1  GGTACACGAAGAGGAAGAGAAAGAGGACTCTGAAGACAAATAATCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACACGAAGAGGAAGAGAAAGAGGACTCTGAAGACAAATAATCTTCCT  100

seq1  TCTGTCATGCTCATTTCTGGGCTGCTACCAGAAGGCGCTGCCCATATTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCATGCTCATTTCTGGGCTGCTACCAGAAGGCGCTGCCCATATTTG  150

seq1  GGGTGGGTCTTCTCAAATTAATTACAGCAACCAGCACATTTCCTTGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGGGTCTTCTCAAATTAATTACAGCAACCAGCACATTTCCTTGGCTG  200

seq1  TGGATCTCAGATTAGTTGATTCTAACTTGTGACAAGTTGTCCTTATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCTCAGATTAGTTGATTCTAACTTGTGACAAGTTGTCCTTATAAAA  250

seq1  ACCTAACATCATAGCCCAGCAAAGGAGCTGGGAATGAACTGAGTTGAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAACATCATAGCCCAGCAAAGGAGCTGGGAATGAACTGAGTTGAAAA  300

seq1  TCAGCCTGCAGAAGCTCACCAGCAAAGGATGTTTGAGATATGATAAGAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCTGCAGAAGCTCACCAGCAAAGGATGTTTGAGATATGATAAGAGA  350

seq1  TAGTAGGATTGTTTTCTGTTAGGAGAAGTCCTATGTACTGAGACAAAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGATTGTTTTCTGTTAGGAGAAGTCCTATGTACTGAGACAAAGGA  400

seq1  ACAGAATTC  409
      |||||||||
seq2  ACAGAATTC  409