MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-047K21
Chromosome	5 (Build37)
Map Location	45,891,332 - 45,892,481
singlet/doublet	singlet
Overlap gene	Lap3
Upstream gene	Ldb2, LOC100041481, LOC100040737, Qdpr, EG624224
Downstream gene	LOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576, EG666103
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ldb2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041481 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC100040737 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Qdpr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:110391 MGI:97836
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG624224 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:624224 MGI:3646230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	Lap3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66988 MGI:1914238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040762 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040762
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Med28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66999 MGI:1914249
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630031F12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58227 MGI:2442958
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9630001P10Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319251 MGI:2441755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	1600023N17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69788 MGI:1917038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs

name	Lcorl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:209707 MGI:2651932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC100041576 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs

name	EG666103 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666103 MGI:3643448
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 mRNAs, 826 ESTs, 11 Proteins

name	Ldb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642890 GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 2 transcript_id : NM_001077398.1

name	Ldb2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642897 GeneID:16826 MGI:894670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LIM domain binding 2 transcript_id : NM_010698.3

name	LOC100041481 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253895 GeneID:100041481
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100041481 transcript_id : XM_001477199.1

name	LOC100040737 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253868 GeneID:100040737
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : hypothetical protein LOC100040737 transcript_id : XM_001475163.1

name	Qdpr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21312519 GeneID:110391 MGI:97836
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : quinoid dihydropteridine reductase transcript_id : NM_024236.1

name	EG624224 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253870 GeneID:624224 MGI:3646230
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : predicted gene, EG624224 transcript_id : XM_888750.3

name	Lap3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142388799 GeneID:66988 MGI:1914238
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine aminopeptidase 3 transcript_id : NM_024434.4

name	Med28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:84579899 GeneID:66999 MGI:1914249
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : mediator of RNA polymerase II transcription, subunit 28 homolog (yeast) transcript_id : NM_025895.3

name	9630031F12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849732 GeneID:58227 MGI:2442958
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9630031F12 gene transcript_id : NM_021416.2

name	9630001P10Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374731 GeneID:319251 MGI:2441755
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : RIKEN cDNA 9630001P10 gene transcript_id : XM_981317.1

name	1600023N17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149253900 GeneID:69788 MGI:1917038
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 3 ESTs product : RIKEN cDNA 1600023N17 gene transcript_id : XM_001477325.1

name	Lcorl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802056 GeneID:209707 MGI:2651932
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ligand dependent nuclear receptor corepressor-like transcript_id : NM_178142.3

name	LOC100041576 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253902 GeneID:100041576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 25 ESTs product : hypothetical protein LOC100041576 transcript_id : XM_001477438.1

name	Lcorl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130079 GeneID:209707 MGI:2651932
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ligand dependent nuclear receptor corepressor-like transcript_id : NM_172153.2

name	EG666103 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374738 GeneID:666103 MGI:3643448
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 826 ESTs, 11 Proteins product : predicted gene, EG666103 transcript_id : XM_981629.1

name	Ldb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116642898 CCDS:CCDS19271.1 GeneID:16826 MGI:894670
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : LIM domain binding 2 isoform 1 protein_id : NP_034828.3

name	Ldb2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116642891 GeneID:16826 MGI:894670
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : LIM domain binding 2 isoform 2 protein_id : NP_001070866.1

name	LOC100041481 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253896 GeneID:100041481
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477249.1

name	LOC100040737 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253869 GeneID:100040737
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001475213.1

name	Qdpr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312520 CCDS:CCDS19272.1 GeneID:110391 MGI:97836
definition	GO_function : GO:0004155 - 6,7-dihydropteridine reductase activity [Evidence IEA] GO_process : GO:0006729 - tetrahydrobiopterin biosynthesis [Evidence IEA] codon_start : 1 product : quininoid dihydropteridine reductase protein_id : NP_077198.1

name	EG624224 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253871 GeneID:624224 MGI:3646230
definition	codon_start : 1 product : similar to CLRN2 protein protein_id : XP_893843.3

name	Lap3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981147 CCDS:CCDS19274.1 GeneID:66988 MGI:1914238
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005622 - intracellular [Evidence IEA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004177 - aminopeptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0004178 - leucyl aminopeptidase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IDA]; GO:0016804 - prolyl aminopeptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0019538 - protein metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : peptidase S; peptidase 7 product : leucine aminopeptidase 3 protein_id : NP_077754.2

name	Med28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385388 CCDS:CCDS19275.1 GeneID:66999 MGI:1914249
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005856 - cytoskeleton [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003779 - actin binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : endothelial-derived product : endothelial-derived gene 1 protein_id : NP_080171.1

name	9630031F12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849733 CCDS:CCDS19276.1 GeneID:58227 MGI:2442958
definition	codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC58227 protein_id : NP_067391.2

name	9630001P10Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374732 GeneID:319251 MGI:2441755
definition	codon_start : 1 product : hypothetical protein LOC319251 protein_id : XP_986411.1

name	1600023N17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149253901 GeneID:69788 MGI:1917038
definition	codon_start : 1 product : hypothetical protein LOC69788 protein_id : XP_001477375.1

name	Lcorl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30025024 CCDS:CCDS19277.1 GeneID:209707 MGI:2651932
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA] GO_process : GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 exception : mismatches in translation note : isoform 2 is encoded by transcript variant 2; transcription factor MLR1; Mblk1-related protein-1 product : Mblk1-related protein-1 isoform 2 protein_id : NP_835278.1

name	LOC100041576 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253903 GeneID:100041576
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001477488.1

name	Lcorl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:26024343 CCDS:CCDS19278.1 GeneID:209707 MGI:2651932
definition	GO_component : GO:0005634 - nucleus [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IDA] GO_process : GO:0006366 - transcription from RNA polymerase II promoter [Evidence IDA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; transcription factor MLR1; Mblk1-related protein-1 product : Mblk1-related protein-1 isoform 1 protein_id : NP_742165.1

name	EG666103 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374739 GeneID:666103 MGI:3643448
definition	codon_start : 1 product : similar to put. HMG-17 protein protein_id : XP_986723.1

name	LOC100040762 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040762
definition	number : 2 pseudo : _no_value

name	LOC100040762 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100040762
definition	number : 1 pseudo : _no_value

clone name	MSMg01-157D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426H05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-433L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-335B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-264D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152F17
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-050M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477A06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-428I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-329H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-198K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-117M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-088P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-207N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-493O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146A24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156B15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146E19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-357D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-471D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376M08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-152C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290E20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409G11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-158C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-145E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398I20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-193L11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-325L10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-359J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401K03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-149E21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311N01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-087C10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-468M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298G17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-192M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210C08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260K20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-226F19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313K09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-018N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-128B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-078P11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-069B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029E15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199O14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-099L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-287F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-318H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002I09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-127B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-179H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343I08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-311L16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-017P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-198G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-171O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-319H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-049H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-279H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162N09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312O13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-193G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065E05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-321J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-199M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-241J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-262J07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-013O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189I19
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-047K21.b	B6Ng01-047K21.g
ACC	DH872477	DH872478
length	1,206	1,106
definition	DH872477\|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K21, 5' end.	DH872478\|Mus musculus domesticus DNA, BAC clone: B6Ng01-047K21, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca gtagccaacatcaaatggtgagaagctggaagcatgcccactaaaatcag ggattagacaaggctgtacactttcttcctacctattcaacattgtgctt gaagtcttagccagagcaattcaacaacaaaaggagatcaaggggataaa attggaaagaaagaagtcaaaatatcactttttgcagatgatatggtagt atatataagtgaccctaaaaattccaccagagaactcctaagcctgataa acagcttcaatgaagtagctggatataaaattaactcaaacaagtcaatg gcctttctgtacacaaaggataaacaggctgagaaagaaattagggaaac aacacccttctcaatagtcacaaataatataaaatatcttggcgtgactc taactaagtaagtgaaagatctgtatgataagaacttcaagtctctgaag aaagaaattaaagaagatctcagaagatggaaagatctcccatgctcatg gattggcaggatcaatatagtaaaaatggctatcttgccaaaagcaatct acagattcaatgcaatccccatcaaaattccaactcaattcttcaatgaa ttagaaagggcaatctgcaaattcatctggaataacaaaaaacctaggat agcaaaaattcttctcaaggataaaagaacctctggtggaatcaccatgc ctgacctaaagctgtactacagagcaattgtgataaaaactgcatgatac tggtatagcgacagacaagtagaccaatggaatagaattgaagacccaga aatgaacccacatacctatggtcacttgatctttgacaggagcaaaacca tccagtgaaaaaaagacagcatttcacaatggtgctgcacactggtgtat catgtagagatgcaatgatcatctatctctgtactagtcaatctagtgat cagactccaataaatcaagacactgactatgagagaaagtgtgaaagcct cagacttgggccaggaaattctgaatgaaatagcatgcttggcctgtaga tcgggaatgacaaatgggactatggatccaggttctgcagccagaatccc gcttagacagcctcactagtgaagtctatcgaatggatatgtcgaattta agatct	gaattcaattcccaattttttattcaagagaaataaacatgaaagttatg tctccattttaatccataaaatggattttaaaaaaatcccacaacacagt atgaaatcatgaaactttcttgaaggtgaggaaaacaagcctcaaatgta actctgtctgactttgtgtctagctgctggtgggctcgattcactcccct gagcacagaggtcaattgtaggatcttgacttgtgttggtcagggtttct attgatgagataaaacactacagccataaagtaacttggggaagtttatt tcagcttacacttttaggaaacagtcattactgaggaaagtcaggacagg aaatcaaacaggagtctggaggtaggagctgatgcagagtccatgaagga gtgctatttactgatttgctcctcatggcttgctcagcctggtttctcat agcacccgggaccactggttccgagatggcactgcccacagtgagctggg acctcccacatcaattgtcaatcaaggaaatacaccacaggggatttttc tcaagtgacattccttcttccaaagtgactttagcttgcaccatcaaagt gatataaaggcaagacagcagacactattcttttggctgtacgtcccatg agtccatgacaaaatcagaaattacctgatatggaccttggttttactac tggcacttttgaggtttttttcaatgatttcagcgaatctggttggtgtc atctcattggctggagactccatcagatgacgggccaagttctgtccaga agcaaagaggacccctttctcccaggcctcgagatcatcgctgtgaagaa aagagtactctcaaagacctcaagtacactgacctttctgctgctaatga gcactatctaaaaaaaaattagactacgaacaaaaatgatgcaagactag atcatcctagccacctcactgagagtaagataatctgactgacagtcact tcacaatttcctcttttgtgcttattcctgcactggaggcgaggcaggcg atctctttgagctgaaacagctggttaagagacatttaaggtagcaggct acgaaa
quality values	Open. Hide. 61 47 35 38 61 36 32 47 55 55 61 47 41 61 61 61 61 61 61 61 61 61 49 55 61 61 59 52 49 49 52 49 37 50 45 52 61 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 61 61 61 61 61 59 59 61 61 59 61 61 59 61 61 61 59 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 61 61 61 61 61 59 59 59 59 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 59 61 59 61 61 61 61 55 44 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 55 61 61 61 61 61 61 61 55 61 61 61 61 47 61 55 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 50 55 55 50 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 50 50 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 53 53 57 53 57 57 57 53 47 47 47 53 53 57 53 57 53 57 57 57 57 47 57 57 57 53 57 57 46 47 53 52 57 57 53 57 57 52 53 43 53 53 53 50 50 57 53 45 47 32 57 57 53 57 57 53 41 37 53 53 47 26 39 45 53 57 47 53 48 40 53 57 57 35 36 57 57 53 50 50 43 57 29 31 52 26 57 53 53 53 53 45 50 52 57 43 41 43 41 57 43 26 53 50 53 45 45 43 46 23 21 12 52 57 53 39 47 50 52 44 53 50 37 47 32 52 50 36 37 39 24 36 47 53 33 20 37 50 38 34 37 47 33 52 33 24 57 57 40 26 26 24 38 17 36 38 52 32 21 38 29 52 37 29 53 40 37 38 38 52 33 40 36 37 33 34 53 57 44 34 57 53 28 27 44 37 37 36 37 32 31 38 38 33 47 30 30 47 40 37 33 44 31 35 28 23 35 31 21 47 46 46 44 40 18 26 30 32 11 44 29 19 30 27 33 29 46 46 46 31 30 29 30 30 27 29 34 36 29 32 32 30 35 29 25 46 51 48 28 48 29 25 29 39 38 35 29 45 30 39 20 37 29 26 27 28 31 32 22 29 30 28 29 30 29 35 14 29 30 26 51 31 23 27 34 26 28 24 29 29 20 33 19 30 36 22 22 11 26 24 32 31 22 29 34 30 29 51 51 51 29 20 29 34 31 26 31 29 29 29 24 33 36 27 33 28 27 33 33 29 36 28 28 28 16 23 31 24 27 29 22 35 28 14 31 27 28 19 25 25 20 29 28 26 27 28 20 33 22 25 27 28 21 27 11 35 25 30 34 15 15 39 51 20 24 35 25 16 34 41 28 18 25 19 41 28 29 21 29 24 29 31 17 5 15 14 28 26 29 28 13 24 20 17 51 30 13 26 8 7 6 12 17 17 26 38 33 26 25 16 12 16 29 17 27 22 13 17 11 6 36 36 44 31 44 25 15 25 13 13 21 28 19 26 44 30 26 34 16 13 29 20 33 22 18 28 23 12 29 8 13 6 24 10 13 28 16 10 24 25 8 22 22 19 26 34 19 26 11 31 12 30 12 28 7 11 9 12 5 14 17 13 3 11 23 9 14 17 18 17 30 26 18 6 6 17 10 12 6 6 15 14 19 5 15 6 23 5 14 31 10 20 11 21 21 14 9 11 7 24 5 3 7 18 24 20 4 11 4 3 8 12 4 4 11 20 6 17 6 16 5 6 2 3 10 5 8 23 32 14 5 5 5 4 6 2 36 13 14 18 6 5 3 4 4 5 4 6 11 12 24 4 2 2 4 21 16 19 30 17 9 5 17 12 15 20 16 4 4 9 23 6 4 5 4 10 10 6 27 7 7 17 12 8 7 8 4 6 3 3 5 19 12 11 4 4 3 5 6 18 10 4 5 4 7 20 9 12 18 12 11 16 7 12 4 5 4 12 1 2 3 4 5 4 13 6 9 7 5 11 7 14 3 4 15 3 2 2 3 16 27 10 4 9 3 3 5 4 9 4 4 4 4 6 3 4 6 11 3 5 5 12 10 6 11 2 2 4 7 11 6 5 5 7 16 4 13 13 2 1 4 1 1 4 10 2 1 2 2 3 3 7 17 9 9 3 9 4	Open. Hide. 61 49 61 49 61 32 23 25 39 28 20 23 19 19 20 27 59 61 61 61 61 61 61 61 59 52 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 59 59 36 35 30 59 61 61 61 61 59 61 61 59 59 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 59 55 55 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 52 61 61 61 55 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 55 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 53 50 43 61 43 50 50 28 43 50 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 53 61 61 61 53 53 61 61 61 61 61 61 61 61 61 61 61 52 45 53 61 53 61 61 61 61 61 52 61 53 47 61 61 45 45 45 42 47 42 45 47 53 47 43 52 45 52 47 53 46 53 53 53 53 46 47 39 42 47 57 53 50 53 53 57 57 53 47 47 42 53 53 53 52 53 53 52 47 53 53 47 47 47 25 53 53 50 47 47 47 53 43 53 52 38 43 57 57 57 52 52 52 52 53 50 50 53 53 57 53 57 47 52 45 53 45 47 41 32 52 45 41 41 41 57 36 28 57 57 57 57 45 52 45 35 31 50 53 53 52 45 30 47 47 38 50 50 50 41 38 50 35 50 24 37 50 39 52 53 39 31 34 47 52 37 37 33 52 40 34 32 30 20 35 30 52 42 16 33 46 33 52 53 38 36 38 44 25 57 34 34 57 23 35 52 39 38 37 32 42 40 42 32 52 25 28 47 37 37 30 53 42 40 57 57 39 29 29 27 37 37 24 35 40 28 40 28 47 44 24 37 41 48 26 37 23 37 24 35 45 35 34 35 57 57 35 35 28 33 28 53 57 41 30 40 29 28 39 30 39 30 28 29 30 31 30 23 19 32 30 24 45 23 28 46 46 38 30 34 36 36 31 30 44 45 27 24 36 37 51 46 32 25 20 26 19 10 46 46 51 46 46 26 28 31 25 31 34 33 20 46 29 35 26 29 29 17 34 28 28 28 28 29 41 19 33 32 30 23 29 28 28 21 28 29 26 28 28 27 31 21 30 18 29 28 36 32 23 34 22 29 24 39 22 36 34 29 8 29 14 28 29 20 35 37 28 18 25 23 25 26 39 14 29 20 29 27 18 28 18 13 28 39 20 22 24 30 26 18 39 19 22 29 16 24 25 27 29 51 21 15 11 10 43 34 12 11 16 21 14 29 20 19 30 14 20 23 23 20 6 15 19 23 34 33 14 20 8 23 14 40 38 38 26 15 29 14 38 11 30 30 28 23 20 21 51 23 9 28 20 13 25 18 21 12 21 27 17 25 11 14 20 36 25 23 12 28 51 23 24 28 26 28 22 27 23 33 21 7 26 5 5 7 7 21 12 24 6 10 9 26 14 38 39 38 38 30 30 30 32 15 20 31 7 17 15 25 31 29 13 32 28 16 29 33 44 44 26 24 19 16 28 22 28 5 16 6 14 32 17 25 17 17 14 33 11 17 27 23 18 16 30 13 7 7 16 13 6 10 16 18 18 11 10 11 29 9 18 16 10 9 25 7 5 15 7 17 10 10 29 12 14 29 6 5 9 14 6 9 5 4 7 14 5 6 6 5 29 6 28 14 23 15 7 5 7 23 4 3 4 3 6 12 4 10 6 6 8 24 24 10 20 10 4 15 6 30 4 16 15 25 11 6 24 6 24 15 15 21 8 4 6 12 7 7 5 6 10 6 5 6 7 3 9 18 3 4 16 9 7 3 5 8 9 16 6 1 4 3 4 4 3 5 6 3 4 6 10 7 3 2 7 21 4 10 4 17 6 13 20 9 6 6 5 6 27 13 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_45891332_45892481
seq2: B6Ng01-047K21.g_67_1172 (reverse)

seq1  TTTCGTAGCCCTGGCTACCCTGTAAATTGCTCTATAACCCAGGCTGGTCT  50
      ||||||||||   ||||||   |||||  |||| |||||   ||| || |
seq2  TTTCGTAGCC--TGCTACC--TTAAATGTCTCT-TAACC--AGCT-GTTT  42

seq1  CAAGCTCAGAGAGATCCGCCTGCCTCTGCCTCCCAGGTGCAGGGATTAAA  100
      | |||||| |||||| |||||||||| ||||||   ||||||| ||  ||
seq2  C-AGCTCAAAGAGAT-CGCCTGCCTC-GCCTCC--AGTGCAGGAAT--AA  85

seq1  GGCACCACAAAGGGGAAATTTGTGAAGTGGACTGCTCAGTCAGATTTATC  150
      |    |||||| | | || ||||||||| ||||| ||||||||| |||||
seq2  G----CACAAAAGAGGAAATTGTGAAGT-GACTG-TCAGTCAGA-TTATC  128

seq1  TTACTTCCTCAGTGGGGTGGGCCTAGGGATGGATCTAGGTCTTTGGCAAT  200
      |||||  ||||||| |||||  ||| |||| |||||| |||||  || ||
seq2  TTACT--CTCAGTGAGGTGG--CTA-GGAT-GATCTA-GTCTT--GC-AT  168

seq1  CATTTTTTTGTTCGTAGTCTTAATTTTTTTTTTTAAGATAAGTGCCTCAA  250
      ||  ||||||||||||||| ||||||||||||   |||| |||| ||| |
seq2  CA--TTTTTGTTCGTAGTC-TAATTTTTTTTT---AGAT-AGTG-CTC-A  209

seq1  TTAGCAGCAGAAAGGTCAGTGTACTTGAGGTCTTTTGAGAGTAACTCTTT  300
      |||||||||||||||||||||||||||||||| ||||||||| |||||||
seq2  TTAGCAGCAGAAAGGTCAGTGTACTTGAGGTC-TTTGAGAGT-ACTCTTT  257

seq1  TCTTCCACAGCGGTGATCTCGAGGCCTGGGAGAAAGGGGTCCTCTTTGCT  350
      |||| ||||||| |||||||||||||||||||||||||||||||||||||
seq2  TCTT-CACAGCGATGATCTCGAGGCCTGGGAGAAAGGGGTCCTCTTTGCT  306

seq1  TCTGGACAGAACTTGGCCCGTCATCTGATGGAGTCTCCAGCCAATGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACAGAACTTGGCCCGTCATCTGATGGAGTCTCCAGCCAATGAGAT  356

seq1  GACACCAACCAGATTCGCTGAAATCATTGAAAAAAACCTCAAAAGTGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACCAACCAGATTCGCTGAAATCATTGAAAAAAACCTCAAAAGTGCCA  406

seq1  GTAGTAAAACCAAGGTCCATATCAGGTAATTTCTGATTTTGTCATGGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAAACCAAGGTCCATATCAGGTAATTTCTGATTTTGTCATGGACT  456

seq1  CATGGGACGTACAGCCAAAAGAATAGTGTCTGCTGTCTTGCCTTTATATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGACGTACAGCCAAAAGAATAGTGTCTGCTGTCTTGCCTTTATATC  506

seq1  ACTTTGATGGTGCAAGCTAAAGTCACTTTGGAAGAAGGAATGTCACTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGATGGTGCAAGCTAAAGTCACTTTGGAAGAAGGAATGTCACTTGA  556

seq1  GAAAAATCCCCTGTGGTGTATTTCCTTGATTGACAATTGATGTGGGAGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCCCCTGTGGTGTATTTCCTTGATTGACAATTGATGTGGGAGGT  606

seq1  CCCAGCTCACTGTGGGCAGTGCCATCTCGGAACCAGTGGTCCCGGGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCTCACTGTGGGCAGTGCCATCTCGGAACCAGTGGTCCCGGGTGCT  656

seq1  ATGAGAAACCAGGCTGAGCAAGCCATGAGGAGCAAATCAGTAAATAGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAAACCAGGCTGAGCAAGCCATGAGGAGCAAATCAGTAAATAGCAC  706

seq1  TCCTTCATGGACTCTGCATCAGCTCCTACCTCCAGACTCCTGTTTGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCATGGACTCTGCATCAGCTCCTACCTCCAGACTCCTGTTTGATTT  756

seq1  CCTGTCCTGACTTTCCTCAGTAATGACTGTTTCCTAAAAGTGTAAGCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCTGACTTTCCTCAGTAATGACTGTTTCCTAAAAGTGTAAGCTGA  806

seq1  AATAAACTTCCCCAAGTTACTTTATGGCTGTAGTGTTTTATCTCATCAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACTTCCCCAAGTTACTTTATGGCTGTAGTGTTTTATCTCATCAAT  856

seq1  AGAAACCCTGACCAACACAAGTCAAGATCCTACAATTGACCTCTGTGCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCTGACCAACACAAGTCAAGATCCTACAATTGACCTCTGTGCTC  906

seq1  AGGGGAGTGAATCGAGCCCACCAGCAGCTAGACACAAAGTCAGACAGAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGTGAATCGAGCCCACCAGCAGCTAGACACAAAGTCAGACAGAGT  956

seq1  TACATTTGAGGCTTGTTTTCCTCACCTTCAAGAAAGTTTCATGATTTCAT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGAGGCTTGTTTTCCTCACCTTCAAGAAAGTTTCATGATTTCAT  1006

seq1  ACTGTGTTGTGGGATTTTTTTAAAATCCATTTTATGGATTAAAATGGAGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTTGTGGGATTTTTTTAAAATCCATTTTATGGATTAAAATGGAGA  1056

seq1  CATAACTTTCATGTTTATTTCTCTTGAATAAAAAATTGGGAATTGAATTC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTTTCATGTTTATTTCTCTTGAATAAAAAATTGGGAATTGAATTC  1106

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Alignment Information