BAC Information

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BAC

Clone NameB6Ng01-050P24
Chromosome5 (Build37)
Map Location 102,892,225 - 102,892,805
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040920, Nkx6-1, Cds1, Wdfy3, EG666515, EG666527, LOC625780
Downstream geneArhgap24, Mapk10, LOC666563, 4930429D17Rik, LOC100041039, 1700021F02Rik, LOC100041049, Ptpn13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050P24.bB6Ng01-050P24.g
ACCDH874774DH874775
length1,181581
definitionDH874774|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P24, 5' end.DH874775|Mus musculus domesticus DNA, BAC clone: B6Ng01-050P24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatactgaatgtctgagaagcaactgaaaaactg
ttcaacatccttaatcatcagggaaatgcaaatctcaaaacaaccctgag
gtaccacctcacaccagtcacaataactaagatcaaaaactcaagtgaca
gcagatgctggcgagaatgtggagaaagaggaacactcctccattgctgg
tgggattgcaagcttgtacaaccactctggaaatcagtctggcagttcct
cagaaaactggaccccagaagatacagcaatacctctcctgggcatttat
ccagatgatgttcaaacttgtaagaaggacacatgctccactatgttcat
agcagccttatttgtaatagccaaaagctggaaagaacccagatatccct
caacagaggaatggatacagaaaatgtggtacatttacacaatggagtac
tactcagctattaaaaacaatgaattcatgaaatttttagacaaatggat
gaatctggaggatattatcctaagtggggtaacccaatcacaaaagaaca
cacatgatatgcacttgctgataagtggatattaacccagaagttcagaa
tacccaagatgcaatttataagacacatgaaactcaagaagaaggaagac
caaagtgttgatacttcgatccttcttagaagggggagcaaaatacccat
ggaagaagttacagagacaaagtttggagcagagactgaaggaaagacca
tccagagactgccccacctgtggatccatcccataaaaaaacactaaaac
ccagacactatgacagataccagcaagagcttgctgacaggagcctgata
tagctgtctcctgagagctctgacagtgccttgactattacagagtggat
gctcacagccatcctttagactgagcacagggtccccaatgaagaagcta
gtgcccaaacagctgaaagggtttgcagccccctaggaggaaaacaataa
ctaaccagtagcctcgagctccctgggacttaaccacaagcaagaaaaca
cagaagaattcgtggctctagctgcttagtaggaagggatgactagtcgt
catcatgatggaagacctttgttcctgtaaagattctatagcccagttag
agaatgcttgggccatattggagatgggtta
gaattcttgaactgtgaaccttctactgttgcaaatagtttgcttcccaa
cgatggaagatgctcttctttccctgtgagaaaacaaattcccagcctgg
tgtcctttcctgttgtcttccaaagcaaagctttggccaaccctatttgc
atgttggagcttccaagttttggtcacagtgccctctctgcaatgtatta
atgtctgaggtctcagatacttcatagagggtcataagaattgcatacgc
ttgtcctctatttacaggctctaatatacatatgcacaacagtagccagc
caacactttcctattagagagctgattacccaacctgacttaatgcactc
ctaaataccagtgcatgtgggaactcacaggatgagtgtttcagtgtggt
tggcttgaggaagcttatggtaggtttgctgagacagaagttgaattgat
aagaacggactggtcttgggaaaagcacacactgctttacactgacagct
gagaaggaaaagctcccaggagaagaggcttcagtgtgtgtgtgtgcgcg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_102892225_102892805
seq2: B6Ng01-050P24.g_69_649

seq1  GAATTCTTGAACTGTGAACCTTCTACTGTTGCAAATAGTTTGCTTCCCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGAACTGTGAACCTTCTACTGTTGCAAATAGTTTGCTTCCCAA  50

seq1  CGATGGAAGATGCTCTTCTTTCCCTGTGAGAAAACAAATTCCCAGCCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATGGAAGATGCTCTTCTTTCCCTGTGAGAAAACAAATTCCCAGCCTGG  100

seq1  TGTCCTTTCCTGTTGTCTTCCAAAGCAAAGCTTTGGCCAACCCTATTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTTCCTGTTGTCTTCCAAAGCAAAGCTTTGGCCAACCCTATTTGC  150

seq1  ATGTTGGAGCTTCCAAGTTTTGGTCACAGTGCCCTCTCTGCAATGTATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGGAGCTTCCAAGTTTTGGTCACAGTGCCCTCTCTGCAATGTATTA  200

seq1  ATGTCTGAGGTCTCAGATACTTCATAGAGGGTCATAAGAATTGCATACGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGAGGTCTCAGATACTTCATAGAGGGTCATAAGAATTGCATACGC  250

seq1  TTGTCCTCTATTTACAGGCTCTAATATACATATGCACAACAGTAGCCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCTCTATTTACAGGCTCTAATATACATATGCACAACAGTAGCCAGC  300

seq1  CAACACTTTCCTATTAGAGAGCTGATTACCCAACCTGACTTAATGCACTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACACTTTCCTATTAGAGAGCTGATTACCCAACCTGACTTAATGCACTC  350

seq1  CTAAATACCAGTGCATGTGGGAACTCACAGGATGAGTGTTTCAGTGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATACCAGTGCATGTGGGAACTCACAGGATGAGTGTTTCAGTGTGGT  400

seq1  TGGCTTGAGGAAGCTTATGGTAGGTTTGCTGAGACAGAAGTTGAATTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGAGGAAGCTTATGGTAGGTTTGCTGAGACAGAAGTTGAATTGAT  450

seq1  AAGAACGGACTGGTCTTGGGAAAAGCACACACTGCTTTACACTGACAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACGGACTGGTCTTGGGAAAAGCACACACTGCTTTACACTGACAGCT  500

seq1  GAGAAGGAAAAGCTCCCAGGAGAAGAGGCTTCAGTGTGTGTGTGTGCGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGGAAAAGCTCCCAGGAGAAGAGGCTTCAGTGTGTGTGTGTGCGCG  550

seq1  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  581
      |||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  581