BAC Information

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BAC

Clone NameB6Ng01-051B23
Chromosome5 (Build37)
Map Location 99,158,856 - 99,270,716
singlet/doubletdoublet
Overlap gene1700007G11Rik
Upstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5
Downstream geneBmp3, Prkg2, LOC100041680, Rasgef1b, A930011G23Rik, LOC100040738, LOC666364
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-051B23.bB6Ng01-051B23.g
ACCDH874858DH874859
length841470
definitionDH874858|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B23, 5' end.DH874859|Mus musculus domesticus DNA, BAC clone: B6Ng01-051B23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(99,158,856 - 99,159,552)(99,270,241 - 99,270,716)
sequence
gaattctctgtttagatcagtaacccatttttgaattggtttatttgtct
tgtcgatggttaatttcttgagttctttatatattatggctgttagacct
ctgtgagatgtagggtgggtgaagagcttttccattctgtatgctgctgt
tttgtcctattgacagtgtcctttgccttacagagactttccagtttctt
gaggtcccatttaataattgttgatcttagtgcctgagctattggtgttc
tgttcaggacattgtctcctgtgcaagtgcactccaggctattcctcact
ttctgttctattagatttagtgtgtctggttttatgttgaggtcattgat
ccacttacacttgagatttgtgcagagagatagctatagatctatttgta
tttttctatatgcattaatccaattagaccagcaccatttgttgaagatg
ctttcttttttattgcatagttttagcttcttcgtcaaaagtcaagtgtc
cataactatgtggctttacttctgggtcttcaattcaataccattgatca
acctgtctgtttttttttttttatgacaataccatacaggttttattact
attgctctgtgatatagcttcagatcagagatggtgacaattagatttta
taggggggaaatgaggtgattctaatttaacttctatttcatcaagaaaa
taaagattttaagaaaactgcatttgcagaaaatttgatgagagaaaatg
taacacaaaatcaagatgtaagagaggataagtgtgttatagctaattat
tataaatggttatggagtccactttgagttttattgattac
tacgagtctatataacactattgctccttctcactaggcaaggtgctgct
gacggcattactttagaagatcacggccagtttgcttagaactatttcag
tcttagtgtgtctcacacaagcaatgccttacacaaccgaggatggttgt
tcacagtattagttaggggttttctagagaattagaaaaggatagaaaaa
ctaagggggcacacatacatacatacatacatacatacatacacacacac
acaaacacacacacacacacacacacagagagagagagagagagagagag
agagagagagaaagagagagagatctggaggaaaatatgaggcttctcca
aaatccaaaacttttgagtaccaccagattattttatattgcgggaaaag
agtacaaataaaacgttacaatagacaacaacggtaaaccctctcaaatt
ttgcactacttagagtttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_99158856_99159552
seq2: B6Ng01-051B23.b_180_880

seq1  TATGCTGCTGTTTTGTCCTATTGACAGTGTCCTTTGCCTTACAGAGACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTGCTGTTTTGTCCTATTGACAGTGTCCTTTGCCTTACAGAGACTT  50

seq1  TCCAGTTTCTTGAGGTCCCATTTAATAATTGTTGATCTTAGTGCCTGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTTTCTTGAGGTCCCATTTAATAATTGTTGATCTTAGTGCCTGAGC  100

seq1  TATTGGTGTTCTGTTCAGGACATTGTCTCCTGTGCAAGTGCACTCCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGTGTTCTGTTCAGGACATTGTCTCCTGTGCAAGTGCACTCCAGGC  150

seq1  TATTCCTCACTTTCTGTTCTATTAGATTTAGTGTGTCTGGTTTTATGTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTCACTTTCTGTTCTATTAGATTTAGTGTGTCTGGTTTTATGTTG  200

seq1  AGGTCATTGATCCACTTACACTTGAGATTTGTGCAGAGAGATAGCTATAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCATTGATCCACTTACACTTGAGATTTGTGCAGAGAGATAGCTATAG  250

seq1  ATCTATTTGTATTTTTCTATATGCATTAATCCAATTAGACCAGCACCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTTGTATTTTTCTATATGCATTAATCCAATTAGACCAGCACCATT  300

seq1  TGTTGAAGATGCTTTCTTTTTTATTGCATAGTTTTAGCTTCTTCGTCAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAGATGCTTTCTTTTTTATTGCATAGTTTTAGCTTCTTCGTCAAA  350

seq1  AGTCAAGTGTCCATAACTATGTGGCTTTACTTCTGGGTCTTCAATTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAGTGTCCATAACTATGTGGCTTTACTTCTGGGTCTTCAATTCAAT  400

seq1  ACCATTGATCAACCTGTCTGTTTTTTTTTTTTTATGACAATACCATACAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGATCAACCTGTCTGTTTTTTTTTTTTTATGACAATACCATACAG  450

seq1  GTTTTATTACTATTGCTCTGTGATATAGCTTCAGATCAGAGATGGTGACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTATTACTATTGCTCTGTGATATAGCTTCAGATCAGAGATGGTGACA  500

seq1  ATTAGATTTTATAGGGGGGAAATGAGGTGATTCTAATTTAACTTCTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGATTTTATAGGGGGGAAATGAGGTGATTCTAATTTAACTTCTATTT  550

seq1  CATCAAGAAAATAAAGATTTTAAG-AAACTGCA-TTGCAGAAAATTTGAT  598
      |||||||||||||||||||||||| |||||||| ||||||||||||||||
seq2  CATCAAGAAAATAAAGATTTTAAGAAAACTGCATTTGCAGAAAATTTGAT  600

seq1  GAGAGAAAATGTAACACAAAATTCAAGATGTAAGAGAGGATAAGTGTGTT  648
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GAGAGAAAATGTAACACAAAA-TCAAGATGTAAGAGAGGATAAGTGTGTT  649

seq1  ATAGCTAATTATTATAAATGGTTATGGAGTCCAC-TTGAGTTT--ATGAT  695
      |||||||||||||||||||||||||||||||||| ||||||||   ||||
seq2  ATAGCTAATTATTATAAATGGTTATGGAGTCCACTTTGAGTTTTATTGAT  699

seq1  TA  697
      ||
seq2  TA  701

seq1: chr5_99270241_99270716
seq2: B6Ng01-051B23.g_66_541 (reverse)

seq1  TGAAACTCTAAGTAGTGCAGGATCTGAAAGGTTTTATTGTTGTTGTGTAT  50
      |||||||||||||||||||  || ||| ||| ||||  |||||||| |||
seq2  TGAAACTCTAAGTAGTGCAAAATTTGAGAGGGTTTACCGTTGTTGTCTAT  50

seq1  TGTATTGTTTTATTTTTTTTATTTTTTTGCTTTTTAAAATAATTTTTTGG  100
      ||||  ||||||||| |  | ||||   ||  | ||||||||| |  |||
seq2  TGTAACGTTTTATTTGTACTCTTTTCCCGCAATATAAAATAATCTGGTGG  100

seq1  TACTCAAAAGTTTTGGATTTTGGAGAAGCCTCATATTTTCAGACTAAATA  150
      ||||||||||||||||||||||||||||||||||||||||   | | || 
seq2  TACTCAAAAGTTTTGGATTTTGGAGAAGCCTCATATTTTC-CTCCAGATC  149

seq1  T-GATCCCCTTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTG  199
      |   || | || ||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTG  199

seq1  TGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTATGTATGTATGTATGTATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTTTGTGTGTGTGTGTATGTATGTATGTATGTATG  249

seq1  TATGTATGTGTGCCCCCTTAGTTTTTCTATCCTTTTCTAATTCTCTAGAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATGTGTGCCCCCTTAGTTTTTCTATCCTTTTCTAATTCTCTAGAA  299

seq1  AACCCCTAACTAATACTGTGAACAACCATCCTCGGTTGTGTAAGGCATTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCTAACTAATACTGTGAACAACCATCCTCGGTTGTGTAAGGCATTG  349

seq1  CTTGTGTGAGACACACTAAGACTGAAATAGTTCTAAGCAAACTGGCCGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTGTGAGACACACTAAGACTGAAATAGTTCTAAGCAAACTGGCCGTG  399

seq1  ATCTTCTAAAGTAATGCCGTCAGCAGCACCTTGCCTAGTGAGAAGGAGCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTAAAGTAATGCCGTCAGCAGCACCTTGCCTAGTGAGAAGGAGCA  449

seq1  ATAGTGTTATATAGACTCGTAGAATTC  476
      |||||||||||||||||||||||||||
seq2  ATAGTGTTATATAGACTCGTAGAATTC  476