BAC Information

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BAC

Clone NameB6Ng01-052A10
Chromosome5 (Build37)
Map Location 56,020,823 - 56,021,656
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666377, LOC666380, EG666405
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-052A10.bB6Ng01-052A10.g
ACCDH875502DH875503
length9551,130
definitionDH875502|Mus musculus domesticus DNA, BAC clone: B6Ng01-052A10, 5' end.DH875503|Mus musculus domesticus DNA, BAC clone: B6Ng01-052A10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgggctttattttattggaatcagtgctaactcatcaatagaa
aacccaattgtatctgaatatatattttctgaagatttatctagaatatc
agtcacagcgaactgcatttcagtcctcaccttctattttatgttatggt
tatgatagagaaaggaaaatcttgctaaaaaaaaaaaaactttctgtgat
gagatgtggttcatttttcttcacactacaggaaaacctcatgaacttgg
ctcaatgcatttaagagagtgtttactagcattccccgttgtgaaaatat
agaaacagataataagatggaagggcaggttctctgatttatggggtgag
gatagaaacctagtgcaatggaaagaccatggaatctataagagtaacct
gagaaatgtctctagactcctagtagtagaagacacagagcctgaactgt
gcatattctgcaattaggcaaggttttagtggacaaacttggacagcaac
tcagacacaatacttatgacctatagtttgtcctgcctgcagaatgtgct
gagaccaaagcctagcataattgccaccagaaaggtgaaagagacttcat
ccagaaactgatagaagcagatacagaatcccacagcaaaatagtaagct
gaacacatgagttctgcaaaggatggagaggaagatccgaggaaccagag
gggtaaatgtcattacaaggatatagtccacagaatcaactgactgatgc
tccttaatgcttgcagagatcggggagcctgtagtgttctgtcctagatg
ctttgcatatgtgctatggctgagtggcttgatattcttgtgggattcct
aaaagtgggagcaggggctgtctttgattcttttgtctgtttgtgggacc
tatccctcctactggtcagtctcatccagcctgatgtgattgttgtgcct
ggatt
gaattcctgatctttccaagacttatgaatgggtgttggattttgtcaaa
tgctttctaggcatctaacaagatgatcatgtggtttttgtctttgagtt
tgtttatatactggattacgttgatgtatttccctatattgaaccatccc
tgcatcccttggatgaaacctacttgatcacggtggatgattgttttgac
gggttcttggactcggttagcaagaactttattgaggattttttgcatcg
atattcatgagagaaattggtctgaagttctctatctttgttgggtcttt
ttgtggtttaggtatcagagtaattgtggcttcatagaatgagttgggta
gagtaccttctacttctattttgtgaaatagtttgtgaagaaccgggatt
agatcttctttgaaggtctgatagaactctgcactaaacccatctggtcc
tgggcttttttttagttgggagactattaatgactgcttctatttcttta
ggggatataggactgtttagatcattaatctcatcttgatttaaatttgg
tacctggtatctgtctagaaatttgtccagttcatccaggttctccagtt
ttgttgagtatagccttttgtagaaggatctgatggtgttttggattcct
tcaggatctgttgttatgccttccttttcatttctgattttgttaattag
aatgtgccctctagtgagtctggctaagggtttgtctattttgttgattt
ttctcaaagaaccagctccttgtttggttgattctttgaatagttcttct
tgtttccacttggttgattttgcccctgagtttgattatttcctgccatc
cattcctctgggtgagtttgcttccttttgtctagagcttttagtgtgtt
gtcaagctgctagtgtgtgctctctctagtttctttttggagcacttaga
gctatgagttttcttctagaatgctttccatggttcccatagtttgggta
tattgtggtttcctttcattaactccaaaaggcataatcttccttatacc
tcctgacgagagatcatgagggaaggttggtcatttccatgtaagtgggg
ctcctaataaatgtaatgaagaaagccctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56020823_56021656
seq2: B6Ng01-052A10.b_42_875

seq1  GAATTCTTGGGCTTTATTTTATTGGAATCAGTGCTAACTCATCAATAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGGCTTTATTTTATTGGAATCAGTGCTAACTCATCAATAGAA  50

seq1  AACCCAATTGTATCTGAATATATATTTTCTGAAGATTTATCTAGAATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAATTGTATCTGAATATATATTTTCTGAAGATTTATCTAGAATATC  100

seq1  AGTCACAGCGAACTGCATTTCAGTCCTCACCTTCTATTTTATGTTATGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACAGCGAACTGCATTTCAGTCCTCACCTTCTATTTTATGTTATGGT  150

seq1  TATGATAGAGAAAGGAAAATCTTGCTAAAAAAAAAAAAACTTTCTGTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATAGAGAAAGGAAAATCTTGCTAAAAAAAAAAAAACTTTCTGTGAT  200

seq1  GAGATGTGGTTCATTTTTCTTCACACTACAGGAAAACCTCATGAACTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTGGTTCATTTTTCTTCACACTACAGGAAAACCTCATGAACTTGG  250

seq1  CTCAATGCATTTAAGAGAGTGTTTACTAGCATTCCCCGTTGTGAAAATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATGCATTTAAGAGAGTGTTTACTAGCATTCCCCGTTGTGAAAATAT  300

seq1  AGAAACAGATAATAAGATGGAAGGGCAGGTTCTCTGATTTATGGGGTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACAGATAATAAGATGGAAGGGCAGGTTCTCTGATTTATGGGGTGAG  350

seq1  GATAGAAACCTAGTGCAATGGAAAGACCATGGAATCTATAAGAGTAACCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGAAACCTAGTGCAATGGAAAGACCATGGAATCTATAAGAGTAACCT  400

seq1  GAGAAATGTCTCTAGACTCCTAGTAGTAGAAGACACAGAGCCTGAACTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAATGTCTCTAGACTCCTAGTAGTAGAAGACACAGAGCCTGAACTGT  450

seq1  GCATATTCTGCAATTAGGCAAGGTTTTAGTGGACAAACTTGGACAGCAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATTCTGCAATTAGGCAAGGTTTTAGTGGACAAACTTGGACAGCAAC  500

seq1  TCAGACACAATACTTATGACCTATAGTTTGTCCTGCCTGCAGAATGTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACACAATACTTATGACCTATAGTTTGTCCTGCCTGCAGAATGTGCT  550

seq1  GAGACCAAAGCCTAGCATAATTGCCACCAGAAAGGTGAAAGAGACTTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCAAAGCCTAGCATAATTGCCACCAGAAAGGTGAAAGAGACTTCAT  600

seq1  CCAGAAACTGATAGAAGCAGATACAGAATCCCACAGCAAAATAGTAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAACTGATAGAAGCAGATACAGAATCCCACAGCAAAATAGTAAGCT  650

seq1  GAACACATGAGTTCTGCAAAGGATGGAGAGGAAGATCCGAGGAACCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACATGAGTTCTGCAAAGGATGGAGAGGAAGATCCGAGGAACCAGAG  700

seq1  GGGTAAATGTCATTACAAGGATATAGTCCACAGAATCAACTGACTGATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAATGTCATTACAAGGATATAGTCCACAGAATCAACTGACTGATGC  750

seq1  TCCTTAATGCTTGCAGAGATCGGGGAGCCTGTAGTGTTCTGTCCTAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAATGCTTGCAGAGATCGGGGAGCCTGTAGTGTTCTGTCCTAGATG  800

seq1  CTTTGCATATGTGCTATGGCTGAGTGGCTTGATA  834
      ||||||||||||||||||||||||||||||||||
seq2  CTTTGCATATGTGCTATGGCTGAGTGGCTTGATA  834