BAC Information

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BAC

Clone NameB6Ng01-054C01
Chromosome5 (Build37)
Map Location 78,493,556 - 78,494,154
singlet/doubletsinglet
Overlap genenone
Upstream geneHod, Spink2, Rest, 2610024G14Rik, Polr2b, Igfbp7, Pea15b, LOC669227
Downstream geneLOC100039398, Mthfr-ps1, EG384187
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054C01.bB6Ng01-054C01.g
ACCDH876964DH876965
length1,2321,041
definitionDH876964|Mus musculus domesticus DNA, BAC clone: B6Ng01-054C01, 5' end.DH876965|Mus musculus domesticus DNA, BAC clone: B6Ng01-054C01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtaccccagtgtttaatagggttatttggtt
ctctggagtctaagttcttgagttctttgtatatcttggatattagccct
ctatcagatgtagcattggtaaagaacttttcccaatctgttggttgcca
ttctgtcctattgacagtgtcctttgccttatagaagctttgcaatttta
tgaagtcccatttgtcaattcttgatcttggagcataagtgaattctgtt
caggaaagtttcccctgtgcccatgtgtttaaggctcttccccactttct
tttctattagttccagtgtatttggctttatgtggaggtccttgatccac
ttggacttgagctttgtacagggagataagaatggatcgattagcattct
tctacatgctaactgctagtttgaacagcaccatttgttgaaaatgcttt
tttccactgaatggttttagttcctttatcaaagatcaagtgaccatagg
tgtgtgtgttcatttttgggtcttcagttctattccattgatctacctgc
ctgtcactgtaccaataacatacagttttgtttttgtttttttttttttt
ttgttttgttttgttttgttttttaactattgctctgtaacacagtttga
gatcagggatggtgattcctccagaagttcttttatcgttgaaaatagtt
tttgctatcctaggtttttttgttattccaaatgattttgagaattggtc
tttctaactctatgaagaattgagttgggattttgatggggattgcattg
aatctgtagattgcttttgacaagatggccatttttcctatattaatcct
gccaatccataagcatgggaaatctttccatcttctgtcatctgagatct
tcttcaatttcttccttcagagacttgaagttcttgtcatgcagatcttt
cacttgcttagtagagtcccaccaaagtattttatattatttatgactta
tgaaggctgttgttttctattcttttcagctgtttatcttgagagaggag
ggccactgaatgttggtattttatccagctacatgcagaggtgtatagta
ggagtcttaggaattcggtacttagacgattgtatatcctgcaaagtgaa
tttggatcccttcattatgatgtccttgaccttggtccaaatgctgatgt
tcagggtccacctgatgctctcgtgcacgatc
gaattcaaggtcaacccagcctacatgagacattatctctgggtataaaa
caaaaggaaaaaaagaaaaacaaaactacagaagcttaactattcttacc
ctggcaaggttaaagttcaaccaaggctatatggtgagaccctgctttaa
aacatctccttgagctgttgatcaggaattttccagaggccatcaaaatg
atcctatttattatcattgttcttgccctctatcagaattttatgataat
gcccattgctaaagacaccacacactttggtcacaagacatggaaaaatg
aatttggtactgaccaaaagcttcctatctagctttttcctagctttgac
attgatctgtacccacaaattaatgatctggttggtggtgtatcactaac
agacttacctatatatgaactctgtgaattacaataatgaacagactggc
aaagaagtaatagtggcacaaatgttgaggtagccacctacctttggaat
agatttacaatcttctccagaggagggtaatgatattgtaaatacctgta
aatctggccaagaattcactgctgaagatcaaaaaggccccagaggttaa
cctactgtaattgttttgctaattcaacaatgtatcatactgcactcaaa
tttgcatctgtgtagattaatgcagctctgagaatttatcagggatgttt
ctatgtttctttgtgcagtaaatagtatttaacattgaagtccaatactg
gtcaaggtacagaggaaacattttgatggagtgcttagccataaatgtga
catccgtcagtatcacagtttcccttcaaggcccaagaattgtcattgaa
gaaagggtaaaaagagccagaagttagggaggatcaggcaaataatgtct
cttacatgtgacagaattgctgcagttacagattcaaagtatagctgact
ccacagaccagcacaagttaaaaccaactaatatttcatcaaaagcagag
gcggacactcatgaactccacctctagctaggaaactattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_78493556_78494154
seq2: B6Ng01-054C01.g_64_662 (reverse)

seq1  TAACCTCTGGGGCCTTTTTGATCTTCAGCAGTGAATTCTTGGCCAGATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTCTGGGGCCTTTTTGATCTTCAGCAGTGAATTCTTGGCCAGATTT  50

seq1  ACAGGTATTTACAATATCATTACCCTCCTCTGGAGAAGATTGTAAATCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTATTTACAATATCATTACCCTCCTCTGGAGAAGATTGTAAATCTA  100

seq1  TTCCAAAGGTAGGTGGCTACCTCAACATTTGTGCCACTATTACTTCTTTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAAGGTAGGTGGCTACCTCAACATTTGTGCCACTATTACTTCTTTG  150

seq1  CCAGTCTGTTCATTATTGTAATTCACAGAGTTCATATATAGGTAAGTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTGTTCATTATTGTAATTCACAGAGTTCATATATAGGTAAGTCTG  200

seq1  TTAGTGATACACCACCAACCAGATCATTAATTTGTGGGTACAGATCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGATACACCACCAACCAGATCATTAATTTGTGGGTACAGATCAATG  250

seq1  TCAAAGCTAGGAAAAAGCTAGATAGGAAGCTTTTGGTCAGTACCAAATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTAGGAAAAAGCTAGATAGGAAGCTTTTGGTCAGTACCAAATTC  300

seq1  ATTTTTCCATGTCTTGTGACCAAAGTGTGTGGTGTCTTTAGCAATGGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCATGTCTTGTGACCAAAGTGTGTGGTGTCTTTAGCAATGGGCA  350

seq1  TTATCATAAAATTCTGATAGAGGGCAAGAACAATGATAATAAATAGGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATAAAATTCTGATAGAGGGCAAGAACAATGATAATAAATAGGATC  400

seq1  ATTTTGATGGCCTCTGGAAAATTCCTGATCAACAGCTCAAGGAGATGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGATGGCCTCTGGAAAATTCCTGATCAACAGCTCAAGGAGATGTTT  450

seq1  TAAAGCAGGGTCTCACCATATAGCCTTGGTTGAACTTTAACCTTGCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCAGGGTCTCACCATATAGCCTTGGTTGAACTTTAACCTTGCCAGG  500

seq1  GTAAGAATAGTTAAGCTTCTGTAGTTTTGTTTTTCTTTTTTTCCTTTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAATAGTTAAGCTTCTGTAGTTTTGTTTTTCTTTTTTTCCTTTTGT  550

seq1  TTTATACCCAGAGATAATGTCTCATGTAGGCTGGGTTGACCTTGAATTC  599
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATACCCAGAGATAATGTCTCATGTAGGCTGGGTTGACCTTGAATTC  599