BAC Information

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BAC

Clone NameB6Ng01-054O02
Chromosome5 (Build37)
Map Location 5,732,651 - 5,733,718
singlet/doubletsinglet
Overlap genenone
Upstream geneFzd1, LOC667678, Pftk1, 1700015F17Rik, Cldn12, Gtpbp10, LOC667699, EG667705, A330021E22Rik, Steap2
Downstream geneSteap1, LOC727711, LOC546854, LOC100041208
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054O02.bB6Ng01-054O02.g
ACCDH877501DH877502
length1,2511,066
definitionDH877501|Mus musculus domesticus DNA, BAC clone: B6Ng01-054O02, 5' end.DH877502|Mus musculus domesticus DNA, BAC clone: B6Ng01-054O02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaactgagtttaaagaaaatacaaacagctcagtgaaattaagaa
gaaagaacttaaggggaataaagatctgcgtgacgcctgaggcaacacaa
acatcaagctgagggaaccgacactcatgccaatccaggactccctgggt
cctgcaagctgaaaggaaagcctttaaagtagactgaatcaaacagaggg
aagactcaggagtggaagataacgttgaggaattaaacaaaataggcaag
agatagaaaaactaaaacacacacacagaggaaaggaacacagcaaatgt
gggacatcataaaaaactgtagatattgataagggaagagaatcccaaat
cagtggcataggctagagcttcaataagataatagaggaaaactttgcca
gattaagaaaagatacggccatagaaatataagaaacagaacacaaataa
acaaggccagaaaaggaaatctccatggcatatcatggttacaacaataa
aacactaagtgtacagaacaaagaaagcatattgaaagctgcaagagaaa
aacacaagccacacgtaaagaaaaactcatcagaataatagttggtgtct
cagtggaaactgaaggccagaagagcctggagctatgcattccaagtcct
aaaagacttacagtcccagcaaaactgtgtgtcataattgaaggataaag
agacactttctatgatacaaacagcctttaaaattacatccaacaaactg
agcctaaagagaataaatacaggaagtaatactagaggctgatgagagga
atgagcacagcagagagactgtgaaggaaatacgaaaccatgaaacacca
ctgaggacacaacaagcgccaaccaaccacacagagaccaccggacacac
acatttcagtaatggctttagatatcactgcccttagttcttcaccaaca
cacacaggtgagcggatgaagagatgatcgccatctttccatagcttacc
ggagacacgccttacctttaaagacaaggactgcccagactgaaaggacg
gacaaacgtaccccagtcaaacgggaccaggaggcagcaggagtcacgga
gcctactgcctgacaaaatagactcacgttaaaccagtcggaaggaatga
aagtggcccttcattctgaatcaagggggaagctaacctagagcgcactc
ctaatctaaatccattgcaccaagggcgggaaaccaattttctcttaaaa
a
gaattcagagttcccctgcctctgcctctcaggtacagggattagagact
aatgctgccacacaggttcaggaatttttgtgacagaaaaaaaaaaaaaa
agagtcaaaaaacagcctcagctctgaggaggtagagagaaaaggatcct
cggaccttgataaccacttagacgagcaaaatccacaactccaggttcaa
agagaaaatctgtctcaaaaaaaataaaaaaggtgatgagcagatgggaa
agatgcctaagacaactctgacccatatgcactcacagagttgttttcca
acaatagacgataccgtgctttggtgcagtcttgagtgtgcttttcctca
gtcatcctagacataacacttggcatatagcaagccaagggcaggaaagg
atgtgcacatacaaaagacctgattcttacgcagcctcagttttaggaga
tccctagattctgtcatcactaaggaaggaatgactagaaaggcaaagac
aggtcagtgtagagatggttcagaaaagaggaactactgacatacaatag
gaggacctcagttagaataggagggccaggtaaagtacgacagactggaa
agtctacttcaggcctgttgaaacagtgtatctgaagaaatagcactgta
gacatggaggaacaccacatgggttatcagggccgttttatgacatgctg
ctgctgtctgaactttgtccttcaggaaaactactgaaaaactataagca
agggcttaccaccatctcaattgcatgatagaaagatctggaaagtacag
gtgacaccaggaaccctgggtacttctcccattgttataactacacatgg
caagaagaaacttgagagaggaagaattttagggaaacaatacaaaatag
taccatcccattgctcacgccagctactctctggccccagtggtctcttc
atcatggagactgccacagagctcagaatctctttccctctggcaggtcg
ctaccacgcagccctgagcttcaaagctcatgtcttttgtattgcacctt
ctggcaaccctagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_5732651_5733718
seq2: B6Ng01-054O02.g_70_1135 (reverse)

seq1  AAGCTAGGGTTTGCCAGAA-GTGCAATACAAAAGGCCATGGGAGCTTTGA  49
      ||||||||| ||||||||| ||||||||||||| | |||  |||||||||
seq2  AAGCTAGGG-TTGCCAGAAGGTGCAATACAAAA-GACAT--GAGCTTTGA  46

seq1  AGCTCAGGGCTGGCGTGGTAGCGACCTGCCAGAGGG-AAGAGATTCTGGA  98
      ||||||||||| |||||||||||||||||||||||| |||||||||| ||
seq2  AGCTCAGGGCT-GCGTGGTAGCGACCTGCCAGAGGGAAAGAGATTCT-GA  94

seq1  GCTCTGTGGCAGTCTCCATGATGCAGAGACCACTGGGGCCAGAGAGTAGC  148
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GCTCTGTGGCAGTCTCCATGATGAAGAGACCACTGGGGCCAGAGAGTAGC  144

seq1  TGGCGTGAGC-ATTGGATGGTACTATTTTGTATTGTTTCCCT-AAATTCT  196
      |||||||||| || |||||||||||||||||||||||||||| |||||||
seq2  TGGCGTGAGCAATGGGATGGTACTATTTTGTATTGTTTCCCTAAAATTCT  194

seq1  TCCTCTCTCAAGTTTCTTCTTGCCATGTGTAGTTATAACAATGGGAGAAG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCTCAAGTTTCTTCTTGCCATGTGTAGTTATAACAATGGGAGAAG  244

seq1  TAACCAGGGTTCCTGGTGTCACCTGTACTTTCCAGATCTTTCTATCATGC  296
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCAGGGTTCCTGGTGTCACCTGTACTTTCCAGATCTTTCTATCATGC  294

seq1  AATTGAGATGGTGGTAAGCCCTTGCTTATAGTTTTTCAGTAGTTTTCCTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAGATGGTGGTAAGCCCTTGCTTATAGTTTTTCAGTAGTTTTCCTG  344

seq1  AAGGACAAAGTTCAGACAGCAGCAGCATGTCATAAAACGGCCCTGATAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAAGTTCAGACAGCAGCAGCATGTCATAAAACGGCCCTGATAAC  394

seq1  CCATGTGGTGTTCCTCCATGTCTACAGTGCTATTTCTTCAGATACACTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTGGTGTTCCTCCATGTCTACAGTGCTATTTCTTCAGATACACTGT  444

seq1  TTCAACAGGCCTGAAGTAGACTTTCCAGTCTGTCGTACTTTACCTGGCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAGGCCTGAAGTAGACTTTCCAGTCTGTCGTACTTTACCTGGCCC  494

seq1  TCCTATTCTAACTGAGGTCCTCCTATTGTATGTCAGTAGTTCCTCTTTTC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTCTAACTGAGGTCCTCCTATTGTATGTCAGTAGTTCCTCTTTTC  544

seq1  TGAACCATCTCTACACTGACCTGTCTTTGCCTTTCTAGTCATTCCTTCCT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCATCTCTACACTGACCTGTCTTTGCCTTTCTAGTCATTCCTTCCT  594

seq1  TAGTGATGACAGAATCTAGGGATCTCCTAAAACTGAGGCTGCGTAAGAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATGACAGAATCTAGGGATCTCCTAAAACTGAGGCTGCGTAAGAAT  644

seq1  CAGGTCTTTTGTATGTGCACATCCTTTCCTGCCCTTGGCTTGCTATATGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCTTTTGTATGTGCACATCCTTTCCTGCCCTTGGCTTGCTATATGC  694

seq1  CAAGTGTTATGTCTAGGATGACTGAGGAAAAGCACACTCAAGACTGCACC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTATGTCTAGGATGACTGAGGAAAAGCACACTCAAGACTGCACC  744

seq1  AAAGCACGGTATCGTCTATTGTTGGAAAACAACTCTGTGAGTGCATATGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCACGGTATCGTCTATTGTTGGAAAACAACTCTGTGAGTGCATATGG  794

seq1  GTCAGAGTTGTCTTAGGCATCTTTCCCATCTGCTCATCACCTTTTTTATT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGAGTTGTCTTAGGCATCTTTCCCATCTGCTCATCACCTTTTTTATT  844

seq1  TTTTTTGAGACAGATTTTCTCTTTGAACCTGGAGTTGTGGATTTTGCTCG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGAGACAGATTTTCTCTTTGAACCTGGAGTTGTGGATTTTGCTCG  894

seq1  TCTAAGTGGTTATCAAGGTCCGAGGATCCTTTTCTCTCTACCTCCTCAGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGTGGTTATCAAGGTCCGAGGATCCTTTTCTCTCTACCTCCTCAGA  944

seq1  GCTGAGGCTGTTTTTTGACTCTTTTTTTTTTTTTTTCTGTCACAAAAATT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGCTGTTTTTTGACTCTTTTTTTTTTTTTTTCTGTCACAAAAATT  994

seq1  CCTGAACCTGTGTGGCAGCATTAGTCTCTAATCCCTGTACCTGAGAGGCA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAACCTGTGTGGCAGCATTAGTCTCTAATCCCTGTACCTGAGAGGCA  1044

seq1  GAGGCAGGGGAACTCTGAATTC  1068
      ||||||||||||||||||||||
seq2  GAGGCAGGGGAACTCTGAATTC  1066