BAC Information

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BAC

Clone NameB6Ng01-054P14
Chromosome5 (Build37)
Map Location 85,138,082 - 85,171,886
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100039608, LOC231368, Epha5, LOC100039489
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054P14.bB6Ng01-054P14.g
ACCDH877570DH877571
length1,019816
definitionDH877570|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P14, 5' end.DH877571|Mus musculus domesticus DNA, BAC clone: B6Ng01-054P14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,170,897 - 85,171,886)(85,138,082 - 85,138,892)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgtgcaccttccctgaa
agaggagagcttgcctgcagagactgctctgaccactgaaactcagagga
gagagctagtctcccacgtctgctatgttttatacttagaataatttgga
aaataggatcccaactatagattaaatttactttttttctcatatacttt
taaataaaagttcatgtacctttccatggcagaaatcttctgcatttcaa
atggtccttcttcccttaccttcaacttttgattatatttctggaaattg
ttcaggtaactgtgtcacattactcatttctgtactcatgtctccctcca
ctgacaataggttatcttcggtttcacacagatttttacgatattttcta
accttaaggaatagagctacttttgatgtcaagcatgaattatttcatat
ttgtctaagaatatatgtaagttgtacacacaaatcgtatacagacatac
tcctccattgctggtaggcgtgcaaacctatatgaccactttgaaaatta
atctgcttgtttcttagaaaactgaaaatagttctaaatcaaggcacaac
tacacctctcttgtgtatattttcaaaaatatgcttcaccataccatgag
gatgtttgatcaactgttcaaagtacctttacttgtaattggaaaaaaat
gtaaacaacctagttgtttctcaactgaagaatagataaaaaaaatatgg
tgcatatacttagtagaatactactcagctattaaaaacaaggacattac
aaaattttcaggcaaatggatggaactaggaaatatcatcctgaataaga
ttacccagatccagaaacacacacataatatatatatagacacttatagg
tggatatttgtataagtacaggataaccagatacatccacagctcaaaaa
agctaggtatgaggatgtc
gaattccagaagccttaaggcagaaagactggaagaatcagataatgtac
taaagaacatattcacagatttttctagattagtgggcttggcttttcaa
gtctattacaaattcaaatatgtgttttgctttatgtatatcttaatttt
ttattttattctgaacaaagaaagaaacattaaggccaacagaagtgttt
gtttttaatgtgtagctttttcctataaattaaggaaatgcaaatatatt
ttattttatgttttgaggtatgtaaaaactagaagttctgaaccatcaag
cagaaagcatgcaggggctagccttaggaacccaagcattttgtagcaga
tttgcagattcgtgagagtcccctaaaaattgaagtttggacagtgtccg
agtctcttgcctgtgactggatcccctttccctacccggagtgcctggtt
gggcttcaatggtagaggatgtgctgggtcttgctggaaattgatgtctg
agggcagagtggtacacaaggggcattttcccttctcttaatgaaatgga
agggagtgatggtaggggatacttaagaacaagagagggaagagaagagg
gaggggagctgtgattggggtataaagtgaataaaaaataaatgattaaa
aaaatgaagacattattttcttttcatctaccctataatagcttgaccaa
aatttcttcaaattaaaccctttttctttcctatgattgagatccgggtc
tattccctttatgggtgagcaatgacttacctatctgaatgctcataata
tatcccttaatgagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_85170897_85171886
seq2: B6Ng01-054P14.b_69_1052 (reverse)

seq1  TAGCTTTTTTTGAGCTTGTGGATGGTATCTTGGTTATCCTGTACTTTATT  50
      |||| |||||||||| ||||||| ||||| ||||||||||||||||   |
seq2  TAGC-TTTTTTGAGC-TGTGGAT-GTATC-TGGTTATCCTGTACTT--AT  44

seq1  ACAAATATCCACTTATAAGTGTCTATATATATATTATGTGTGTGTTTCTG  100
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ACAAATATCCACCTATAAGTGTCTATATATATATTATGTGTGTGTTTCTG  94

seq1  GATCTGGGTAATCTTATTCAGGATGATATTTCCTAGTTCCATCCATTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGGTAATCTTATTCAGGATGATATTTCCTAGTTCCATCCATTTGC  144

seq1  CTGAAAATTTTGTAATGTCCTTGTTTTTAATAGCTGAGTAGTATTCTACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATTTTGTAATGTCCTTGTTTTTAATAGCTGAGTAGTATTCTACT  194

seq1  AAGTATATGCACCATATTTTTTTTATCTATTCTTCAGTTGAGAAACAACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATGCACCATATTTTTTTTATCTATTCTTCAGTTGAGAAACAACT  244

seq1  AGGTTGTTTACATTTTTTTCCAATTACAAGTAAAGGTACTTTGAACAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTTTACATTTTTTTCCAATTACAAGTAAAGGTACTTTGAACAGTT  294

seq1  GATCAAACATCCTCATGGTATGGTGAAGCATATTTTTGAAAATATACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAACATCCTCATGGTATGGTGAAGCATATTTTTGAAAATATACACA  344

seq1  AGAGAGGTGTAGTTGTGCCTTGATTTAGAACTATTTTCAGTTTTCTAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTGTAGTTGTGCCTTGATTTAGAACTATTTTCAGTTTTCTAAGA  394

seq1  AACAAGCAGATTAATTTTCAAAGTGGTCATATAGGTTTGCACGCCTACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCAGATTAATTTTCAAAGTGGTCATATAGGTTTGCACGCCTACCA  444

seq1  GCAATGGAGGAGTATGTCTGTATACGATTTGTGTGTACAACTTACATATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGAGGAGTATGTCTGTATACGATTTGTGTGTACAACTTACATATA  494

seq1  TTCTTAGACAAATATGAAATAATTCATGCTTGACATCAAAAGTAGCTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAGACAAATATGAAATAATTCATGCTTGACATCAAAAGTAGCTCTA  544

seq1  TTCCTTAAGGTTAGAAAATATCGTAAAAATCTGTGTGAAACCGAAGATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTAAGGTTAGAAAATATCGTAAAAATCTGTGTGAAACCGAAGATAA  594

seq1  CCTATTGTCAGTGGAGGGAGACATGAGTACAGAAATGAGTAATGTGACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATTGTCAGTGGAGGGAGACATGAGTACAGAAATGAGTAATGTGACAC  644

seq1  AGTTACCTGAACAATTTCCAGAAATATAATCAAAAGTTGAAGGTAAGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTGAACAATTTCCAGAAATATAATCAAAAGTTGAAGGTAAGGGA  694

seq1  AGAAGGACCATTTGAAATGCAGAAGATTTCTGCCATGGAAAGGTACATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGACCATTTGAAATGCAGAAGATTTCTGCCATGGAAAGGTACATGA  744

seq1  ACTTTTATTTAAAAGTATATGAGAAAAAAAGTAAATTTAATCTATAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTTATTTAAAAGTATATGAGAAAAAAAGTAAATTTAATCTATAGTTG  794

seq1  GGATCCTATTTTCCAAATTATTCTAAGTATAAAACATAGCAGACGTGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTATTTTCCAAATTATTCTAAGTATAAAACATAGCAGACGTGGGA  844

seq1  GACTAGCTCTCTCCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGCAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGCTCTCTCCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGCAGGCA  894

seq1  AGCTCTCCTCTTTCAGGGAAGGTGCACATATATAAAGAACTCAAGAAGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCCTCTTTCAGGGAAGGTGCACATATATAAAGAACTCAAGAAGGT  944

seq1  GGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGC  990
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGC  984

seq1: chr5_85138082_85138892
seq2: B6Ng01-054P14.g_69_884

seq1  GAATTCCAGAAGCCTTAAGGCAGAAAGACTGGAAGAATCAGATAATGTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAGCCTTAAGGCAGAAAGACTGGAAGAATCAGATAATGTAC  50

seq1  TAAAGAACATATTCACAGATTTTTCTAGATTAGTGGGCTTGGCTTTTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAACATATTCACAGATTTTTCTAGATTAGTGGGCTTGGCTTTTCAA  100

seq1  GTCTATTACAAATTCAAATATGTGTTTTGCTTTATGTATATCTTAATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATTACAAATTCAAATATGTGTTTTGCTTTATGTATATCTTAATTTT  150

seq1  TTATTTTATTCTGAACAAAGAAAGAAACATTAAGGCCAACAGAAGTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATTCTGAACAAAGAAAGAAACATTAAGGCCAACAGAAGTGTTT  200

seq1  GTTTTTAATGTGTAGCTTTTTCCTATAAATTAAGGAAATGCAAATATATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTAATGTGTAGCTTTTTCCTATAAATTAAGGAAATGCAAATATATT  250

seq1  TTATTTTATGTTTTGAGGTATGTAAAAACTAGAAGTTCTGAACCATCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATGTTTTGAGGTATGTAAAAACTAGAAGTTCTGAACCATCAAG  300

seq1  CAGAAAGCATGCAGGGGCTAGCCTTAGGAACCCAAGCATTTTGTAGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCATGCAGGGGCTAGCCTTAGGAACCCAAGCATTTTGTAGCAGA  350

seq1  TTTGCAGATTCGTGAGAGTCCCCTAAAAATTGAAGTTTGGACAGTGTCCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGATTCGTGAGAGTCCCCTAAAAATTGAAGTTTGGACAGTGTCCG  400

seq1  AGTCTCTTGCCTGTGACTGGATCCCCTTTCCCTACCCGGAGTGCCTGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTCTTGCCTGTGACTGGATCCCCTTTCCCTACCCGGAGTGCCTGGTT  450

seq1  GGGCTTCAATGGTAGAGGATGTGCTGGGTCTTGCTGGAAATTGATGTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTCAATGGTAGAGGATGTGCTGGGTCTTGCTGGAAATTGATGTCTG  500

seq1  AGGGCAGAGTGGTACACAAGGGGCATTTTCCCTTCTCTTAATGAAATGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGAGTGGTACACAAGGGGCATTTTCCCTTCTCTTAATGAAATGGA  550

seq1  AGGGAGTGATGGTAGGGGATACTTAAGAACAAGAGAGGGAAGAGAAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTGATGGTAGGGGATACTTAAGAACAAGAGAGGGAAGAGAAGAGG  600

seq1  GAGGGGAGCTGTGATTGGGGTATAAAGTGAATAAAAAATAAATGATTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGAGCTGTGATTGGGGTATAAAGTGAATAAAAAATAAATGATTAAA  650

seq1  AAAATGAAGACATTATTTTC-TTTCATCTA-CCTATAATAGCTTGTACTA  698
      |||||||||||||||||||| ||||||||| ||||||||||||||  | |
seq2  AAAATGAAGACATTATTTTCTTTTCATCTACCCTATAATAGCTTGACCAA  700

seq1  AATTTCTTCAAATTAAACCC-TTTTCTTTCCTATGATTGAGATCCGGGTC  747
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AATTTCTTCAAATTAAACCCTTTTTCTTTCCTATGATTGAGATCCGGGTC  750

seq1  TATTCCCTTTAT-GGTGAGCAATGACTTACCTATCTGAATGCTCATAATA  796
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTTTATGGGTGAGCAATGACTTACCTATCTGAATGCTCATAATA  800

seq1  TAT-CCTTAATGAGCC  811
      ||| ||||||||||||
seq2  TATCCCTTAATGAGCC  816