BAC Information

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BAC

Clone NameB6Ng01-056H16
Chromosome5 (Build37)
Map Location 146,407,082 - 146,586,162
singlet/doubletdoublet
Overlap geneLOC667065, Cyp3a41, Cyp3a44
Upstream geneEG621967, Tmem130, LOC100039427, Trrap, Smurf1, AW146299, EG231885, EG666992, 1700018F24Rik, Arpc1a, Arpc1b, Pdap1, Bud31, Ptcd1, Cpsf4, Atp5j2, Zkscan14, Zkscan5, EG622116, Zfp655, LOC677270, EG666311, EG622127, LOC100039566, Cyp3a16, LOC100041375
Downstream geneCyp3a11, Cyp3a25, LOC667098, LOC667104, LOC100041449, LOC433961, EG622306, 1700001J03Rik, LOC667121, Rnf6, Cdk8, Wasf3, LOC623198, LOC622924, 4930449I24Rik, LOC100041548, LOC100041554, LOC100041566, LOC100041578, EG667172, Gpr12, Usp12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056H16.bB6Ng01-056H16.g
ACCDH878622DH878623
length1,0671,115
definitionDH878622|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H16, 5' end.DH878623|Mus musculus domesticus DNA, BAC clone: B6Ng01-056H16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(146,578,763 - 146,586,162)(146,407,082 - 146,408,238)
sequence
gaattcagctcttttttccttcatagcatagtatctcaaacactgtattt
tgtttgtttttttttttttttttttgattgttcgtttgttttacttttct
ttggtgattttgttgattcattcactggctctcaatatttttcttcccct
gttgcagatacctctgaaattaagcagacaaggaattcttcaaccagaaa
aacccattgttctaaaagttgtgccacgggatgcagttataactggagca
tgactttccctcaaggagttcttctgagttcttcaggaaggcagtgtcta
agaacatcagacactatagtttcatcatgagtaaaatcgagatgaataaa
ggacttaatagattgattttgattcatggttaaagattcagtacatccac
tgagctttctcagtgtctgtgcaagttaacatataatacaaaagagatga
ataaatcagtgacagcacaggaaatttgccttcactggttctcatgggac
catctccacccacatctcgttgtctctgctaattccttttgagatcttta
gatagtaaccacgtgtttgtaatttgatcaagaatttttaatgaaaatgt
gagctattgtaacaactctagttgtagaattgttatcagatgctttagtt
gccatattttataataaatgctgcacagaaaatgtaaataaacagttaaa
aatcttcatttcaagtcttttaatatttgttgagaacttcatagaataca
ttttgatcacattaaatgcctttccacaaactcttcctagattctatctt
acctactttcccacacactttacaatctctctcactatttcagaccaaag
caaagcaaaataaagcaaagcaaaacaaagcaaaacaaaacaaaacaaaa
caaacaaatttgtgaagtccagtttgtattggagggctattcctgggtgt
gaggctaccctagagtgaagttcaccccattgaaaaaactgatctgtctc
tgtcaggagctctcagctgacatatctctttgctagagtaagaactgaac
tcctctcagctaaattt
gaattctgtgcccagagtgagggagaggatctcaggtgggacctggggac
tcagtaatcaggacacaaagaagagagatgtgccagagcaagactacaat
ggcaggtaatatgccacagggttgggaattaggctggggagtaggccagg
caggctagaatagctcagaatctgtcagcttagtgcctgaacctctgata
tatatatatatatatatatatatgtaaatatacaaacaaagaaactaagg
ctgggcatagaaaaccataaaagaggaagctgtagaagagtttgggttgg
gtgcctagcagatctgcataaagtcattattaacattaacaagagttagt
accactggagatatagatcagaagtaaacagtttccctagcatatatagg
tgtggcttgatctcgtttatggccaaaacattaaaatgaaaaattaactt
tgtccttacttcatttgaggccttcaagatgactccacaagtaaaggcat
tgactgataatgttgataatctgagtttggtctttgggacccacataata
ggagagaactggctctcaaaattcctcttttgacctacacacacacacac
acacacacacacacacacacacacacacaagcacacacatacaaaaacag
atacatgcacacacatacactataccatttgctgcccctaaccacaataa
attaaaacatgaaaatttgaaaactttttacaagcattaatttcaacttt
tgctaactgttgggggagggtctttcattctctgtattcagatgctggtt
tctgtcccttgagaccctgatactcgtcagaagtggggcaatctcatcag
taataaagaatcccctgtatcattggggttcagaatactcccccagctat
ctcttattggttaacaagggctgaaatcaaatactgggcagatagacagt
tgtagtcacagcaggtagggtccagagagtaggctcacaggcaggtagag
aagagatgtgtcaggaggcaggcatcagaaaataccagaagctcccatga
accacctggaatggaaagctggaagtcatctgcaggaatgggcttggcag
gatgatagctttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_146578763_146586162
seq2: B6Ng01-056H16.b_48_1114 (reverse)

seq1  AAATTCTAGCTGAGAGGAGTTCAAGTTCGTACCTCTAGCAAAGGAGATAT  50
                                                        
seq2  --------------------------------------------------  0

seq1  GGTCAGCTGAGAGCTCCTGACAGAGGACAGATCAGTTTTTTTCAATGGGG  100
                                                        
seq2  --------------------------------------------------  0

seq1  TGACACTGGGTGGAACTTCACTCTAGGGTAGGCCTCACACCCAGGAATAG  150
                                                        
seq2  --------------------------------------------------  0

seq1  CCCTCCAATACAAACTGGACTTCACAAATTTGTTTTGTTTTGTTTTGTTT  200
                                                        
seq2  --------------------------------------------------  0

seq1  TGCTTTGCTTTGCTTTGTTTTGCTTTGCTTTATTTTGCTTTGCTTTGGTC  250
                                                        
seq2  --------------------------------------------------  0

seq1  TGAAATAGTGAGAGAGATTGTAAAGTGTGTGGGAAAGTAGATAAGATAGA  300
                                                        
seq2  --------------------------------------------------  0

seq1  ATCTAGGAAGATTTTGTGGAAAGGCATTATTGTGATCAAAATGTATTCTA  350
                                                        
seq2  --------------------------------------------------  0

seq1  TGAAGTTCTCAACAAATATTAAAAGACTTGAAATGAAGATTTTTAACTAA  400
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTTTATTTACATTTTCTGTGAAGCATTTATTATAAAATATGGCAACTA  450
                                                        
seq2  --------------------------------------------------  0

seq1  AAGCATCTGATAATAATTCTAGAGAGGTTTCTGCCTCAGGCTCCAGCGGG  500
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCGCCTTGGTTCCGGAACTCCACAGAGGGCAGGCTGCAAAGGAGAGGG  550
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGGAATACAGAGGCCAGCAGTTTCTGGGACAGGCAAGAGCCAGAGAGC  600
                                                        
seq2  --------------------------------------------------  0

seq1  TTCTGAGGTGGCGCCATCTTCGGCTCCAGACAACCGGCCACCTTCCTGGT  650
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGCACAGGGGTCCGCCCGGCCCAAGAGTTTTCTGCCTCAGGCCCCGG  700
                                                        
seq2  --------------------------------------------------  0

seq1  CGGGAGCCACCTTGGCTCCGGGACTCTGTGGAGGGCAGGCTGCACGGGTG  750
                                                        
seq2  --------------------------------------------------  0

seq1  AGGGTGAAGAATACAGAAGCCAGCAGTTTCTGGGACAGGCGAGAGCCAGA  800
                                                        
seq2  --------------------------------------------------  0

seq1  GAGCTTCTGAGGCAGCTCCATCTTCGGCTCCAGACAGCCTCCAACCTTCC  850
                                                        
seq2  --------------------------------------------------  0

seq1  TGGCCAAAGCAACACAGCTTGTGGGAAAGATCCTGTTTTGGGCCTTCATC  900
                                                        
seq2  --------------------------------------------------  0

seq1  TTCAGCCAGGAGGAGGTCCTAACACCAGATAACTGTGCACCTTCCCTGAA  950
                                                        
seq2  --------------------------------------------------  0

seq1  AGAGGAGAGCTTGCCTGCAGACACTGCTCTGACCACTGAAACTCAGAGGA  1000
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAGCAAGTCTCCCACGTCTGCTGCTAGAGGGTAACAAAATCACCAGAG  1050
                                                        
seq2  --------------------------------------------------  0

seq1  GAACAATCTCTAAACAAAGACAACTATAACAACTAACTCCAGAGATTGCC  1100
                                                        
seq2  --------------------------------------------------  0

seq1  AGATGACGAAAAGTAAATGTAAGAATCCTACTAACAGAAACCAGGACCAC  1150
                                                        
seq2  --------------------------------------------------  0

seq1  TCACCATCATCAGAACCCAGAACACCCACGTTGCCCAGTCCAGGGCACCC  1200
                                                        
seq2  --------------------------------------------------  0

seq1  TAACACATCTGAAAAGGTAGACCTGGATTCAAAAGCTTATCTCATGATGA  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TGGTAGAGGACATAAAGAAGGAATTTAATAACTCAATTAAAGAAATACAG  1300
                                                        
seq2  --------------------------------------------------  0

seq1  GAGAACACTGCTAAAGAGTTACAAGTCCTTAAAGAAAAACAGGAAAACAC  1350
                                                        
seq2  --------------------------------------------------  0

seq1  AACCAAACAGGTAGAAGTCCTTATGGAAAAACAGGAAAACACATCCAAAC  1400
                                                        
seq2  --------------------------------------------------  0

seq1  AGGTGATGGAAATGAACAAAACCATACTAGACCTAAAAAGGGAAGTAGAC  1450
                                                        
seq2  --------------------------------------------------  0

seq1  ACAATAAAGAAAACCCAAAGTGAGGCAACGCTGGAGATAGAAACCCTAGG  1500
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGGAATCTGGAACCATACATGCCAGCATTAGCAACAGAATACAAGAGA  1550
                                                        
seq2  --------------------------------------------------  0

seq1  TGGAAGAGAGAATCTCAGGTGCAGAAGATATGTGCATAGAGAACATCGGC  1600
                                                        
seq2  --------------------------------------------------  0

seq1  ACAACAATCAAAGAGAATGGAAAATGCAAAAAGATCCTAACTCAAAACAT  1650
                                                        
seq2  --------------------------------------------------  0

seq1  CCAGGAAATCCAGGACACAATGAGAAGACCAAACCTACGGATGATAGGAG  1700
                                                        
seq2  --------------------------------------------------  0

seq1  TGGATGAGAATGAAGATTTTCAACTCAAAGGACCAGCAAACATCTTCAAC  1750
                                                        
seq2  --------------------------------------------------  0

seq1  AAAATTATTGAAGAAAACTTCCCAAATCTAAAGAAAGTGATGCCCATGAA  1800
                                                        
seq2  --------------------------------------------------  0

seq1  CATACAAGAAGCCTACAGAACTCCAAATAGACTGGACCAAAAAAAGAAAT  1850
                                                        
seq2  --------------------------------------------------  0

seq1  TCCTCCCGACACATAATAATCAGAACATCAAATGCACTAAATAAAGATAG  1900
                                                        
seq2  --------------------------------------------------  0

seq1  AATACTAAAAGCAGTAAGGGAAAAAGGTCAAGTAACATATAAAGGCAAGC  1950
                                                        
seq2  --------------------------------------------------  0

seq1  CTATCAGAATTACACCAGATTTTTCACCAGAGATGAAAGCCAGAAGAGCC  2000
                                                        
seq2  --------------------------------------------------  0

seq1  TGGACAGATGTTATACAGACACTAAAAGAACACAAATTCCAGCCCAGGCT  2050
                                                        
seq2  --------------------------------------------------  0

seq1  ACTATACCCAGCCAAACTCTCAATTACCATAGATGGAGAAACCAAAGTAT  2100
                                                        
seq2  --------------------------------------------------  0

seq1  TCCATGACAAAACTAAATTCACCCATTATCTCTCCACGAATCCAGCCCTT  2150
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAGAATAATAACAGAAAAAAAAAAAAAAACAATTCAAGGACGGGAACC  2200
                                                        
seq2  --------------------------------------------------  0

seq1  ACACCCTAGAAAAAACAAGCAGATAATCCCTCAACAAAACTAAAAGAAGA  2250
                                                        
seq2  --------------------------------------------------  0

seq1  AAGCCACAAGAACAGAATGCCAACTTTAACAACAAAAATAACAGGAAGCA  2300
                                                        
seq2  --------------------------------------------------  0

seq1  ACAATTACTTTTCCTTAATATCTCTTAATATCACTGGTCTCAACACCCCA  2350
                                                        
seq2  --------------------------------------------------  0

seq1  ATAAAAAGACGTAGACTAACAAACTGGCTACACAAACAAGACCCAACATT  2400
                                                        
seq2  --------------------------------------------------  0

seq1  TTGCGGCTTACAGGAAACTTATCTCAGAGAAAAAGATAGACACTACCTCA  2450
                                                        
seq2  --------------------------------------------------  0

seq1  GAATGAAAGGATGGAAAACAACTTTCCAAGCAAATGGTATGAAGGAACAA  2500
                                                        
seq2  --------------------------------------------------  0

seq1  GCTGGAGTAGCCATCCTAATATCTGATAAGATTGACTTCCAACCCAAAGT  2550
                                                        
seq2  --------------------------------------------------  0

seq1  CATCGAAAAAGACAAGGAGGGGCACTTCATACTCATCAAAGGTAAAATAC  2600
                                                        
seq2  --------------------------------------------------  0

seq1  TCCAAGAGCAACTCTCAATTCTGAATATCTATGCTCCAAATACAAGGGCA  2650
                                                        
seq2  --------------------------------------------------  0

seq1  GCCACATTCATTAAAGAAACTTTAGTAAAGCTCAAAGCACACATTGCACC  2700
                                                        
seq2  --------------------------------------------------  0

seq1  TCACACAATAATAGTGGGAGACTTCAACACACCACTTTCACCAACGGACA  2750
                                                        
seq2  --------------------------------------------------  0

seq1  GATCATGGAAACAGAAACTAAACAGGGACACAGTGAAACTAACAGAAGTG  2800
                                                        
seq2  --------------------------------------------------  0

seq1  ATGAAACAAATGGACTTAACAGATATCTACAGAACATTTTATCCTAAAAC  2850
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAGGATATACCTTCTTCTCAGCACCTCATGGTACCTTCTCTAAAATTG  2900
                                                        
seq2  --------------------------------------------------  0

seq1  ACCGCATAATTGGTCACAAAACAAGCCTCAACATATACAAAAATATTGAA  2950
                                                        
seq2  --------------------------------------------------  0

seq1  ATTGTCCCATGCATCCTATCAGATCACCATGGACTAAGGCTGATCTTCAA  3000
                                                        
seq2  --------------------------------------------------  0

seq1  TAACAAAATAAATAATAGAAAGCCAACATTCACGTGGAAACTGAACAACA  3050
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTTCTCAATGATACCTTGGTCAAGGAAGGAATAAAGAAAGAAATTAAG  3100
                                                        
seq2  --------------------------------------------------  0

seq1  GACTTTTTGGAGTTTAATGAAAATGAAGCCACAACATACCCAAAACTATG  3150
                                                        
seq2  --------------------------------------------------  0

seq1  GCACAAAATGAAAGCATTCCTAAGAGGAAAACTCATAGCTCTGAGTGCCT  3200
                                                        
seq2  --------------------------------------------------  0

seq1  CCAAAAGGAAACTAGAGAGAGCACACATTAGCAGCTTGACTACACACCTA  3250
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGGTCTAGAAAAAAAGGAAGCAAATTCACCCAAGAGGAGTAGAAAGCA  3300
                                                        
seq2  --------------------------------------------------  0

seq1  GGAAATAATCAAACTCAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAA  3350
                                                        
seq2  --------------------------------------------------  0

seq1  CTGTTCAAAGAATCAACCAATGAAGGAACTGGTTCTTTGAGAAAATCAAC  3400
                                                        
seq2  --------------------------------------------------  0

seq1  AAGATAGTTAAACCCTTAGCCTGACTCACTAGGGGGCACAGGGAAAGCAT  3450
                                                        
seq2  --------------------------------------------------  0

seq1  CCTAATTAACAAAATCAGAAATGAAAAGGGAGACATAACAACAGATCCTG  3500
                                                        
seq2  --------------------------------------------------  0

seq1  AAGAAATACAAAACACCATCAGATCCTTCTACAAAAGGCTATACTCAACA  3550
                                                        
seq2  --------------------------------------------------  0

seq1  AAACTGGAAAACCTGGATGAAAAGGACAAGTTTCTAGACAGATACCAGGT  3600
                                                        
seq2  --------------------------------------------------  0

seq1  ACCAAAGCTAAATCAAGATCAGGTTAATGATCTCAACAGTCCTATATCCC  3650
                                                        
seq2  --------------------------------------------------  0

seq1  CTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAGCCAAAAAAAGCCCA  3700
                                                        
seq2  --------------------------------------------------  0

seq1  GGACCCGACGGGTTTAGTGCAGAGTTCTATCAGACTTTCAAAGAAGACCT  3750
                                                        
seq2  --------------------------------------------------  0

seq1  AATTCCAGTTCTTCACAAACTATTCCACAAAATAGAAACGGAAGGTACTC  3800
                                                        
seq2  --------------------------------------------------  0

seq1  TACCCAACTCATTCTATGAAGCCACAATTACTCTGATACCTAAACCACAA  3850
                                                        
seq2  --------------------------------------------------  0

seq1  AAAGATCCAACAAAGATAGAGAACTTCAAAGCAATTTCCCTTATGAATAT  3900
                                                        
seq2  --------------------------------------------------  0

seq1  CGATGCAAAAATCCTCAATAAAGTTCTTGCTAACCGAATCCAAGAACACA  3950
                                                        
seq2  --------------------------------------------------  0

seq1  TCAAAACAATCATCCATCCTGACCAAGTAGTTTTAATCCAAGGGATGCAG  4000
                                                        
seq2  --------------------------------------------------  0

seq1  GGATGGTTCAATATACGGAAATCCATCAATGTAATCCTTATATAAACAAA  4050
                                                        
seq2  --------------------------------------------------  0

seq1  CTCAAAGACAAAAACTCATGATCACCTCGTTAGATGTGGAAAAAGCATTT  4100
                                                        
seq2  --------------------------------------------------  0

seq1  GACAAAATCCAACACCCATTCAGGATAAAAGTCTTGGAAAGATCAGGAAT  4150
                                                        
seq2  --------------------------------------------------  0

seq1  TCAAGGCCCATACCTAAACATGATAAAAGCAGTCTACAGCAAACCAGTAG  4200
                                                        
seq2  --------------------------------------------------  0

seq1  CCAACATCAAAGTAAATGGTGAGAAGCTGGAAGCAATCCCACTAAAATCA  4250
                                                        
seq2  --------------------------------------------------  0

seq1  GGGACTAGACAAGGCTGTCCACTCTCGCCCTACCTATTCAACATAGTACT  4300
                                                        
seq2  --------------------------------------------------  0

seq1  TGAAGTCCTAGCCAGAGCAATTAGACAACAAAAGGAGATCAAGGGGATAC  4350
                                                        
seq2  --------------------------------------------------  0

seq1  AAATTGGAAAGGAAGAAGTCAAAATATCACTTTTTGCAGATGATATGATA  4400
                                                        
seq2  --------------------------------------------------  0

seq1  GTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCCTAAGCCTGAT  4450
                                                        
seq2  --------------------------------------------------  0

seq1  AAACAGCTTCAATGAAGTAGCTGGATATAAAATTAACTCAAACAAGTCAA  4500
                                                        
seq2  --------------------------------------------------  0

seq1  TGGCCTTTCTGTACACAAAGGATAAACAGGCTGAGAAAGAAATTAAGGAA  4550
                                                        
seq2  --------------------------------------------------  0

seq1  ACAACACCCTTCTCAATAGTCACAAATAATATAAAATACCTTGGCGTGAC  4600
                                                        
seq2  --------------------------------------------------  0

seq1  TCTAACTAAGGAAGTGAAAGATCTGTATGATAAGAACTTCAAGTCTCTAA  4650
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAAGAAATTAAAGAAGATCTCAGAAGATGGAAAGATCTCCCAAGCTCA  4700
                                                        
seq2  --------------------------------------------------  0

seq1  TGGATTGGCAGGATCAACATTTCAAAAATGGCTATCTTGCCAAAAGCAAT  4750
                                                        
seq2  --------------------------------------------------  0

seq1  CTACAGATTCAATGCAATCCCCATCAAAATTCCAACTCAATTCTTCAACT  4800
                                                        
seq2  --------------------------------------------------  0

seq1  AATTAGAAAGGGCAATCAGCAGATTCATCTGGAATAACAAAAAACTGAGG  4850
                                                        
seq2  --------------------------------------------------  0

seq1  ATAGCAAAAACTCTTCTCAAGGATAAAAGAACCTCTGGTGGAATCACCAT  4900
                                                        
seq2  --------------------------------------------------  0

seq1  GACAGACCTAAAACTGTACTACAGAGCAATTGTGATCAAAACTGCATGGT  4950
                                                        
seq2  --------------------------------------------------  0

seq1  ACTGGTATACTAACAGACAAGTAGACCAATGGAACAGAATTGAAGACCCA  5000
                                                        
seq2  --------------------------------------------------  0

seq1  GAGATGAATCCACACACCTATGGTCACTTGATCTTTGACAAGGGAACTAA  5050
                                                        
seq2  --------------------------------------------------  0

seq1  AACCATCCAGTGGAAAAAAGACAGCATTTTCAACAATTGGTGCTGGCACA  5100
                                                        
seq2  --------------------------------------------------  0

seq1  ACTGGTGGTTATCATGTAGAAGAATGCGAATTGATCCATTTCTATCTCCT  5150
                                                        
seq2  --------------------------------------------------  0

seq1  TGTACTAAGGTCAAATCTAAGTGGATTAAGGAACTCCACATAAAACCAGA  5200
                                                        
seq2  --------------------------------------------------  0

seq1  GACACTGAAACTTGTAGAGGAGAAAGTAGGGAAAAGCCTCGAAGATATGG  5250
                                                        
seq2  --------------------------------------------------  0

seq1  GTACAGGGGAAAAATTCCTGAATACATCAGCAATGGCTAGTGCTGTAAAA  5300
                                                        
seq2  --------------------------------------------------  0

seq1  TCAAGAATCAATAAATGGGAACTCATAAAATTTCAAAGCTTCTGCAAAGC  5350
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAGACACCGTCAATAAGACAAAAAGGCCACCAACAGATTTGGAAAGGA  5400
                                                        
seq2  --------------------------------------------------  0

seq1  TCTTTACCTATCCCAAATCGGATAGGGAACTAATATCGAATATATATAAA  5450
                                                        
seq2  --------------------------------------------------  0

seq1  GAACTCAAGAAGGTGGACTCCAGAAAATCAAACAACCCCATTAAAAAATG  5500
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCTCAGAGCTGAACAAAGAGTTTTCACCTGAGGAATACCGAATGGCAG  5550
                                                        
seq2  --------------------------------------------------  0

seq1  AGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAA  5600
                                                        
seq2  --------------------------------------------------  0

seq1  AACAAAATAACACTGAGATTCCACTTCACTCCAGTCAGAATGGCTAAGAT  5650
                                                        
seq2  --------------------------------------------------  0

seq1  CAAAAACTCAGTTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGGGGAA  5700
                                                        
seq2  --------------------------------------------------  0

seq1  CACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAA  5750
                                                        
seq2  --------------------------------------------------  0

seq1  TCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCC  5800
                                                        
seq2  --------------------------------------------------  0

seq1  CGCAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGGAAGA  5850
                                                        
seq2  --------------------------------------------------  0

seq1  AGAACACATGCTCCACTATGTTCATAGCAGCCTTGTTTATAATAGCCAGA  5900
                                                        
seq2  --------------------------------------------------  0

seq1  AGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAAT  5950
                                                        
seq2  --------------------------------------------------  0

seq1  TTGGTACATTTACACAATGGAATACTACTCAGCTATTAAAAAGAATGAAT  6000
                                                        
seq2  --------------------------------------------------  0

seq1  TTATGAAATTCCTAGGCAAATGGATGGACCTGGAGGGTATCATCCTGAGT  6050
                                                        
seq2  --------------------------------------------------  0

seq1  GAAGTAACCCAATCACAAAGGAACTCGCACAATATGTACTCACTGATAAG  6100
                                                        
seq2  --------------------------------------------------  0

seq1  TGGATATTAGCCCAGAAACTTAGTATACCCAAGATATAAGATTCAAATTG  6150
                                                        
seq2  --------------------------------------------------  0

seq1  CCAAACGCATGAAATTCAAGAAGAACGAAGATCAAAGTGTGGACACTTTA  6200
                 |||||  ||  ||  | || |||    ||    ||| ||
seq2  -----------AAATT-TAGCTGAGAGGAGTTCA----GTTCTTACTCTA  34

seq1  CCCTTTCTTAGAAATGGGAACAAAACACCCATGGAAGGAGTTACAGAAAC  6250
       |       ||| |||  | |  |   | | ||         ||||| ||
seq2  GC---AAAGAGATATGTCAGCTGAGAGCTCCTG---------ACAGAGAC  72

seq1  AAAATTTGGAGCTGTGACGAAAGGATGGAC--CA-TCTAGTGATTGC--C  6295
      | |      || | |  | |  || || ||  || ||||| | | ||  |
seq2  AGA----TCAGTTTTTTCAATGGGGTGAACTTCACTCTAG-GGTAGCCTC  117

seq1  ATATGCAGGGAT--CCATCCCAT--AATCAG--CTTC-CAAATGCTGACA  6338
      | |  |||| ||  || ||| ||  || | |  |||| |||||  ||   
seq2  ACACCCAGGAATAGCCCTCCAATACAAACTGGACTTCACAAAT-TTG---  163

seq1  CCATTGCATACACTAACAAGATTTTGCTGAAAGGACCCAGGTATAGCT--  6386
         |||  |    |       |||||||            || | |||  
seq2  --TTTGTTTTGTTTTGTTTTGTTTTGCT----------TTGTTTTGCTTT  201

seq1  -CTCTCTTGTGAGACTATGCCAGGGCCTAGCAAACACAAAAGTGGATGCT  6435
       || | || ||   || |||   || ||         || ||||      
seq2  GCTTTATTTTG---CTTTGCTTTGGTCT-------GAAATAGTG------  235

seq1  CACAGTCAGCTATTGGATGGATCACAGGGCCCCCAATGGAGG--AGCTAG  6483
         ||  ||  |||| |  | |    |||     || | |||  || |||
seq2  ---AG--AGAGATTGTAAAG-TGTGTGGG-----AAAGTAGGTAAGATAG  274

seq1  AGAACATGCTCAAAGAGCT-----AAAGGGATCTGCAACCCTATAGGTGG  6528
      |    ||     ||||| |     ||||| ||         |  | || |
seq2  A----ATCTAGGAAGAGTTTGTGGAAAGGCAT---------TTAATGT-G  310

seq1  AACAACAT-TATGAACTAACCAGTACCCCGGAGCTCTTAACTCTAGCTGC  6577
      | ||| || |||   |||           | || ||| |||         
seq2  ATCAAAATGTAT--TCTA----------TGAAGTTCTCAAC---------  339

seq1  ATATGTAACAAAAGATGGCCTAGTCGGCCATCACTGCAAAGAGAGGCCCA  6627
        |  ||  ||||||    ||             || || || ||    |
seq2  --AAATATTAAAAGA----CT-------------TGAAATGA-AG----A  365

seq1  TTGGACTTGCAAACTTTATATGCCCCCGTACAGGGGAACGCCAGGGCCAA  6677
      ||    ||   |||| | |||       ||||                  
seq2  TT----TT--TAACTGTTTAT------TTACA------------------  385

seq1  AAAGGGGGAGTGGGTGGGTAGGGGATTAGGGGTGTGTGTATGGGGGACCT  6727
                                      | | |||     | | | 
seq2  -------------------------------TTTTCTGT-----GCAGCA  399

seq1  TTGGGATAGCATTGAAAATGTAAACGAGGAAAATACCTAATTAAAAAAAA  6777
      ||    ||  ||  || |||  |||    |||  | || ||         
seq2  TT----TATTATAAAATATGGCAAC---TAAAGCATCTGAT---------  433

seq1  AACAATTCTACAACTAGAGTTGTTACAATAGCTCTCATTTTCATCAAAAA  6827
      |||||||||||||||||||||||||||||||||| ||||||||| |||||
seq2  AACAATTCTACAACTAGAGTTGTTACAATAGCTCACATTTTCATTAAAAA  483

seq1  TTCTTGATCAAATTACAAACACGTGGTTACTATCTAAAGATCTCAAAAGG  6877
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGATCAAATTACAAACACGTGGTTACTATCTAAAGATCTCAAAAGG  533

seq1  AATTAGCAGAGACAATGAGATGTGGATAGAGATGATCCCATGAGAAACGG  6927
      ||||||||||||||| ||||||||| | |||||| ||||||||||| | |
seq2  AATTAGCAGAGACAACGAGATGTGGGTGGAGATGGTCCCATGAGAACCAG  583

seq1  TGAAGGCAAATTTCCTTTGCTGTCACTGATTTATTCATCTCTTTCGTATT  6977
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  TGAAGGCAAATTTCCTGTGCTGTCACTGATTTATTCATCTCTTTTGTATT  633

seq1  ATATGTTAACTTGCACAGACACTGAGAAAGCTCAGTGGATGTACTGAATC  7027
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTTAACTTGCACAGACACTGAGAAAGCTCAGTGGATGTACTGAATC  683

seq1  TTTAACCATGAATCAAAATCAATCTATTAAGTCCATTATTCATCTGGATT  7077
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  TTTAACCATGAATCAAAATCAATCTATTAAGTCCTTTATTCATCTCGATT  733

seq1  TTACTCATGATGAAACTAAAGTGTCTGATGTTCTTAGACACTGCCTTCCT  7127
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TTACTCATGATGAAACTATAGTGTCTGATGTTCTTAGACACTGCCTTCCT  783

seq1  GAAGAACTCAGAAGAACTCCTTGAGGGAATGTCATGCTCCAGTTATAACT  7177
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  GAAGAACTCAGAAGAACTCCTTGAGGGAAAGTCATGCTCCAGTTATAACT  833

seq1  GCATCCCGTGGCACAACTTTTAGAACAATGGGTTTTTCTGGTTGAAGAAT  7227
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCCGTGGCACAACTTTTAGAACAATGGGTTTTTCTGGTTGAAGAAT  883

seq1  TCCTTGTCTGCTTAATTTCAGAGGTATCTGCAACAGGGGAAGAAAAATGT  7277
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TCCTTGTCTGCTTAATTTCAGAGGTATCTGCAACAGGGGAAGAAAAATAT  933

seq1  TGAGATCCAGTGAATGAATCAACAAAATCACCAAAAGTAAAGTAAAACAA  7327
      ||||| |||||||||||||||||||||||||| |||| ||||||||||||
seq2  TGAGAGCCAGTGAATGAATCAACAAAATCACC-AAAGAAAAGTAAAACAA  982

seq1  ACGAACAATC------------AAAAAAACAAACAAAATACAGTGTTTGA  7365
      ||||||||||            ||||||||||||||||||||||||||||
seq2  ACGAACAATCAAAAAAAAAAAAAAAAAAACAAACAAAATACAGTGTTTGA  1032

seq1  GATACTATGCTATGAAGGAAAAAAGAGCTGAATTC  7400
      |||||||||||||||||||||||||||||||||||
seq2  GATACTATGCTATGAAGGAAAAAAGAGCTGAATTC  1067

seq1: chr5_146407082_146408238
seq2: B6Ng01-056H16.g_69_1183

seq1  GAATTCTGTGCCCAGAGTGAGGGAGAGGATCTCAGGTGGGACCTGGGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGCCCAGAGTGAGGGAGAGGATCTCAGGTGGGACCTGGGGAC  50

seq1  TCAGTAATCAGGACACAAAGAAGAGAGATGTGCCAGAGCAAGACTACAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTAATCAGGACACAAAGAAGAGAGATGTGCCAGAGCAAGACTACAAT  100

seq1  GGCAGGTAATATGCCACAGGGTTGGGAATTAGGCTGGGGAGTAGGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGTAATATGCCACAGGGTTGGGAATTAGGCTGGGGAGTAGGCCAGG  150

seq1  CAGGCTAGAATAGCTCAGAATCTGTCAGCTTAGTGCCTGAACCTCTGATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTAGAATAGCTCAGAATCTGTCAGCTTAGTGCCTGAACCTCTGATA  200

seq1  TATATATATATATATATATATATGTAAATATACAAACAAAGAAACTAAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATGTAAATATACAAACAAAGAAACTAAGG  250

seq1  CTGGGCATAGAAAACCATAAAAGAGGAAGCTGTAGAAGAGTTTGGGTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCATAGAAAACCATAAAAGAGGAAGCTGTAGAAGAGTTTGGGTTGG  300

seq1  GTGCCTAGCAGATCTGCATAAAGTCATTATTAACATTAACAAGAGTTAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTAGCAGATCTGCATAAAGTCATTATTAACATTAACAAGAGTTAGT  350

seq1  ACCACTGGAGATATAGATCAGAAGTAAACAGTTTCCCTAGCATATATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTGGAGATATAGATCAGAAGTAAACAGTTTCCCTAGCATATATAGG  400

seq1  TGTGGCTTGATCTCGTTTATGGCCAAAACATTAAAATGAAAAATTAACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTTGATCTCGTTTATGGCCAAAACATTAAAATGAAAAATTAACTT  450

seq1  TGTCCTTACTTCATTTGAGGCCTTCAAGATGACTCCACAAGTAAAGGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTACTTCATTTGAGGCCTTCAAGATGACTCCACAAGTAAAGGCAT  500

seq1  TGACTGATAATGTTGATAATCTGAGTTTGGTCTTTGGGACCCACATAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGATAATGTTGATAATCTGAGTTTGGTCTTTGGGACCCACATAATA  550

seq1  GGAGAGAACTGGCTCTCAAAATTCCTCTTTTGACCTACACACACACACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGAACTGGCTCTCAAAATTCCTCTTTTGACCTACACACACACACAC  600

seq1  ACACACACACACACACACACACACACACAAGCACACACATACAAAAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACAAGCACACACATACAAAAACAG  650

seq1  ATACATGCACACACATACACTATACCATTTGCTGCCCCTAACCACAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGCACACACATACACTATACCATTTGCTGCCCCTAACCACAATAA  700

seq1  ATTAAAACATGAAAATTTGAAAACTTTTTACAAGCATTAATTTCAACTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAACATGAAAATTTGAAAACTTTTTACAAGCATTAATTTCAACTTT  750

seq1  TGCTAACTGTTGGGGGAGGGTCTTTCATTCTCTGTATTCAGATGCTGGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAACTGTTGGGGGAGGGTCTTTCATTCTCTGTATTCAGATGCTGGTT  800

seq1  TCTGTCCCCTGAGACCCTGATACTCGTCAGAAGT-GGGCAATCTCATCAG  849
      |||||||| ||||||||||||||||||||||||| |||||||||||||||
seq2  TCTGTCCCTTGAGACCCTGATACTCGTCAGAAGTGGGGCAATCTCATCAG  850

seq1  TAATAAAGAATCCCCTGTATCATTGGGGTTTCAAGAATACT-CCCCAGCT  898
      ||||||||||||||||||||||||||||||   |||||||| ||||||||
seq2  TAATAAAGAATCCCCTGTATCATTGGGGTT--CAGAATACTCCCCCAGCT  898

seq1  ATCTCTTATTGGTTAACAAAGGGCTGAAAATCAAATTACTGGGCAGAATA  948
      ||||||||||||||||| |||||||| |||||||| |||||||||| |||
seq2  ATCTCTTATTGGTTAAC-AAGGGCTG-AAATCAAA-TACTGGGCAG-ATA  944

seq1  GAACAAGTTGTTAGTCACAGGCAGGTTAGGGTCCAAGAGAAGTAGGGCTC  998
      ||   ||||| |||||||| ||||| |||||||| |||| |||| |||||
seq2  GA--CAGTTG-TAGTCACA-GCAGG-TAGGGTCC-AGAG-AGTA-GGCTC  986

seq1  ACAGGCAGGTAGAGGAAGAAGAAGGTTGTCAGGAGGTCAGGCATCAGAAA  1048
      ||||||||||||| |||| ||| |  |||||||||| |||||||||||||
seq2  ACAGGCAGGTAGA-GAAG-AGATG--TGTCAGGAGG-CAGGCATCAGAAA  1031

seq1  AAATCACCAAGAGAGCTCACCATAAAAACACACATGGAATGGAGAAAGAC  1098
      | |    | ||| ||||| |||| ||    ||| |||||||  ||||| |
seq2  ATA----CCAGA-AGCTC-CCATGAA---CCACCTGGAATG--GAAAG-C  1069

seq1  TGGGAAAGGTCAATCTGCAAGGAAAATGGGGCTTGTGGCAGGGATGTTAT  1148
      |||   | ||| |||||| |||||    |||||  ||||| |||||  ||
seq2  TGG---AAGTC-ATCTGC-AGGAA---TGGGCT--TGGCA-GGATG--AT  1106

seq1  AGCTTTGTG  1157
      |||||||||
seq2  AGCTTTGTG  1115