BAC Information

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BAC

Clone NameB6Ng01-056I10
Chromosome5 (Build37)
Map Location 148,408,308 - 148,552,530
singlet/doubletdoublet
Overlap geneFlt1
Upstream geneUsp12, 1700041I07Rik, Rpl21, Rasl11a, LOC100039699, LOC627218, Gtf3a, Mtif3, Lnx2, Rpo1-3, Gsh1, Pdx1, Cdx2, EG231903, LOC622952, Flt3, Map1lc3-ps3, LOC384254, LOC100039805, Pan3
Downstream geneLOC100039825, Pomp, Slc46a3, C130038G02Rik, LOC100041819, Slc7a1, LOC100041842, Ubl3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056I10.bB6Ng01-056I10.g
ACCDH878658DH878659
length689232
definitionDH878658|Mus musculus domesticus DNA, BAC clone: B6Ng01-056I10, 5' end.DH878659|Mus musculus domesticus DNA, BAC clone: B6Ng01-056I10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(148,551,843 - 148,552,530)(148,408,308 - 148,408,539)
sequence
gaattcacagtccttctgcctcagctctccccgatcccccagacctgcac
caccaggccctacccaactttagtttgagggaggaggggcagcattaggt
tggtagggcattgcctctcctttttttttttttgactaagaccaagtgaa
gagtgatgacatgttccctcccgacatgcaagcagcaccctcgtcacccc
cagcaggctgacacacctctcacgtcgctggagcagcatggagggtacag
ttgacattaaagcttgcttttggtgtctatgtgggttggagtcaccccat
ttacaccacccagctaagcaactaccaacctaaaactgaagcccagcaaa
acaaagtcaggtgttacaggcctgtgaatccaggtactccagaggctaaa
acatgattgtaaatccaaggcctacagaggctacaaaataaattcaaagc
cagtctagcaatttagcaagcctctgtttcaaaataaaagtaaagattct
gttgacaaaaatccaataaactggatgactttaaactacacaaatgttcc
tagcagtggtggcttatgcctttagccccagcacttgggaggcagaagta
ggtagatctgagtttgaggctagcctggtctactgattgagtttcaggac
agccagagctggggagaggagggaggagggaggagagtc
ttagcattgtctggaatgccccacactagttcagaaatgtgttaggtcac
tgtcatgcaatgcaagggtaatggaatggccgtgacaagtccctgtcact
ctcgggagagggcagggcagcatgagcttggcccctgttatgttttcaat
atgaaatgtcctccacagactcaagcattgcatgcgagcttactccagag
gtggggttgctattttgggttgggggggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_148551843_148552530
seq2: B6Ng01-056I10.b_45_733 (reverse)

seq1  GACTCTCCTCCCTCCTCCCTCCTCT-CCCAGCTCTGGCTGTCCTGAAACT  49
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GACTCTCCTCCCTCCTCCCTCCTCTCCCCAGCTCTGGCTGTCCTGAAACT  50

seq1  CAATCAGTAGACCAGGCTAGCCTCAAACTCAGATCTACCTACTTCTGCCT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAGTAGACCAGGCTAGCCTCAAACTCAGATCTACCTACTTCTGCCT  100

seq1  CCCAAGTGCTGGGGCTAAAGGCATAAGCCACCACTGCTAGGAACATTTGT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTGCTGGGGCTAAAGGCATAAGCCACCACTGCTAGGAACATTTGT  150

seq1  GTAGTTTAAAGTCATCCAGTTTATTGGATTTTTGTCAACAGAATCTTTAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTTAAAGTCATCCAGTTTATTGGATTTTTGTCAACAGAATCTTTAC  200

seq1  TTTTATTTTGAAACAGAGGCTTGCTAAATTGCTAGACTGGCTTTGAATTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTGAAACAGAGGCTTGCTAAATTGCTAGACTGGCTTTGAATTT  250

seq1  ATTTTGTAGCCTCTGTAGGCCTTGGATTTACAATCATGTTTTAGCCTCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTAGCCTCTGTAGGCCTTGGATTTACAATCATGTTTTAGCCTCTG  300

seq1  GAGTACCTGGATTCACAGGCCTGTAACACCTGACTTTGTTTTGCTGGGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACCTGGATTCACAGGCCTGTAACACCTGACTTTGTTTTGCTGGGCT  350

seq1  TCAGTTTTAGGTTGGTAGTTGCTTAGCTGGGTGGTGTAAATGGGGTGACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTTAGGTTGGTAGTTGCTTAGCTGGGTGGTGTAAATGGGGTGACT  400

seq1  CCAACCCACATAGACACCAAAAGCAAGCTTTAATGTCAACTGTACCCTCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCCACATAGACACCAAAAGCAAGCTTTAATGTCAACTGTACCCTCC  450

seq1  ATGCTGCTCCAGCGACGTGAGAGGTGTGTCAGCCTGCTGGGGGTGACGAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGCTCCAGCGACGTGAGAGGTGTGTCAGCCTGCTGGGGGTGACGAG  500

seq1  GGTGCTGCTTGCATGTCGGGAGGGAACATGTCATCACTCTTCACTTGGTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGCTTGCATGTCGGGAGGGAACATGTCATCACTCTTCACTTGGTC  550

seq1  TTAGTCAAAAAAAAAAAAAGGAGAGGCAATGCCCTACCAACCTAATGCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCAAAAAAAAAAAAAGGAGAGGCAATGCCCTACCAACCTAATGCTG  600

seq1  CCCCTCCTCCCTCAAACTAAAGTTGGGTAGGGCCTGGTGGTGCAGGTCTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTCCCTCAAACTAAAGTTGGGTAGGGCCTGGTGGTGCAGGTCTG  650

seq1  GGGGATCGGGGAGAGCTGAGGCAGAAGGACTGTGAATTC  688
      |||||||||||||||||||||||||||||||||||||||
seq2  GGGGATCGGGGAGAGCTGAGGCAGAAGGACTGTGAATTC  689

seq1: chr5_148408308_148408539
seq2: B6Ng01-056I10.g_74_305

seq1  TTAGCATTGTCTGGAATGCCCCACACTAGTTCAGAAATGTGTTAGGTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCATTGTCTGGAATGCCCCACACTAGTTCAGAAATGTGTTAGGTCAC  50

seq1  TGTCATGCAATGCAAGGGTAATGGAATGGCCGTGACAAGTCCCTGTCACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGCAATGCAAGGGTAATGGAATGGCCGTGACAAGTCCCTGTCACT  100

seq1  CTCGGGAGAGGGCAGGGCAGCATGAGCTTGGCCCCTGTTATGTTTTCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGGAGAGGGCAGGGCAGCATGAGCTTGGCCCCTGTTATGTTTTCAAT  150

seq1  ATGAAATGTCCTCCACAGACTCAAGCATTGCATGCGAGCTTACTCCAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATGTCCTCCACAGACTCAAGCATTGCATGCGAGCTTACTCCAGAG  200

seq1  GTGGGGTTGCTATTTTGGGTTGGGGGGGAGGG  232
      ||||||||||||||||||||||||||||||||
seq2  GTGGGGTTGCTATTTTGGGTTGGGGGGGAGGG  232