BAC Information

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BAC

Clone NameB6Ng01-056K12
Chromosome5 (Build37)
Map Location 145,123,228 - 145,123,853
singlet/doubletsinglet
Overlap genenone
Upstream geneGrid2ip, Kdelr2, LOC231869, LOC670671, Daglb, Rac1, 2810453I06Rik, Pscd3, Usp42, Eif2ak1, 4921520G13Rik, Jtv1, Pms2, 4930526H21Rik, AU022870, Ocm, Lmtk2, Bhlhb8, 2210010N04Rik, Bri3, Baiap2l1
Downstream gene4930568B11Rik, Nptx2, EG621967, Tmem130, LOC100039427, Trrap, Smurf1, AW146299, EG231885, EG666992, 1700018F24Rik, Arpc1a, Arpc1b, Pdap1, Bud31, Ptcd1, Cpsf4, Atp5j2, Zkscan14, Zkscan5, EG622116, Zfp655, LOC677270, EG666311, EG622127
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-056K12.bB6Ng01-056K12.g
ACCDH878748DH878749
length626718
definitionDH878748|Mus musculus domesticus DNA, BAC clone: B6Ng01-056K12, 5' end.DH878749|Mus musculus domesticus DNA, BAC clone: B6Ng01-056K12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagaaggttttacgactggagagacccctgttgagcacagtcat
taggggtgagctccgcagagaagcagcccctgtgcagtagagctgaaacc
gtcatgctcttgaaaagaaggcctggacagtttgtgtattctcctcttca
atgtgtccaccttgttcctgtggaaggggttccacgagtttttctcttcg
cctggaatgctctctgctttggcctccttgttgtctcctctcatttggat
ttcggcccagatgcggtttcagagagaccatccctgaccactcactcacc
cagtagcagtattttaggcctttagtaacagaatgtttgattttaattct
gaaaacgatgatcccaagctggggcaggctgggtgacaagggactcccca
cagaagggagcaacagtgacaataggccagacgccccggagctcccagga
acgggaccaccaaccaaagaatacacatggagagacccatggcgctggcc
acatatgtggcggagggtggccttgttggacatcagtgggaggagaggcc
cttgggcctgagggtgttcgatgccccagcgtaggggaatgccagggtgg
gaggactggagtgggtgggtggggga
gaattccaggccagatggagctacaaagtgagaccttggatcaaaagaca
aaacaaatacacacacacacacacacacacacacacacacacacacacgg
gggcgggggggagagaggagagagagcacactagaacacagagagcatct
gccatcaacactatgagctaaagacaatgtgtttagcagaatcttttgtg
atacttcgaatagcaatgcccctcacaggctcgtcttttgatacccaggt
ccccatttcttgccgctgtcttgaatgctgtggaacacgtgggaggtgga
gcataactggtagaagcatcacattaagcctatgaaggtcatgccaccct
tggttcctctccattctctacctgccacctcaggatcccactgctgtggc
ttggaaccattgctacccaccatgccttgctccacagtgaaggactgagt
tctctctgaaactgtgagccaaaataaatctttgctcttctgacagttga
tcatcattgtcaaagtgactggatttagaatctctgtggaaaagatacct
ctgggtgtgtctacagggatgcttccagacggcttttaacagaagcagga
acctgaatgtgggcagcagaatccatgggctggggtcctggaatgcatga
aaaggggcaagggagagaagagaagagaaagagaaaaaagagaagaggat
aggagaggagaggatagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_145123228_145123853
seq2: B6Ng01-056K12.b_50_675

seq1  GAATTCCAGAAGGTTTTACGACTGGAGAGACCCCTGTTGAGCACAGTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAAGGTTTTACGACTGGAGAGACCCCTGTTGAGCACAGTCAT  50

seq1  TAGGGGTGAGCTCCGCAGAGAAGCAGCCCCTGTGCAGTAGAGCTGAAACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGTGAGCTCCGCAGAGAAGCAGCCCCTGTGCAGTAGAGCTGAAACC  100

seq1  GTCATGCTCTTGAAAAGAAGGCCTGGACAGTTTGTGTATTCTCCTCTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGCTCTTGAAAAGAAGGCCTGGACAGTTTGTGTATTCTCCTCTTCA  150

seq1  ATGTGTCCACCTTGTTCCTGTGGAAGGGGTTCCACGAGTTTTTCTCTTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTCCACCTTGTTCCTGTGGAAGGGGTTCCACGAGTTTTTCTCTTCG  200

seq1  CCTGGAATGCTCTCTGCTTTGGCCTCCTTGTTGTCTCCTCTCATTTGGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGAATGCTCTCTGCTTTGGCCTCCTTGTTGTCTCCTCTCATTTGGAT  250

seq1  TTCGGCCCAGATGCGGTTTCAGAGAGACCATCCCTGACCACTCACTCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCCCAGATGCGGTTTCAGAGAGACCATCCCTGACCACTCACTCACC  300

seq1  CAGTAGCAGTATTTTAGGCCTTTAGTAACAGAATGTTTGATTTTAATTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGCAGTATTTTAGGCCTTTAGTAACAGAATGTTTGATTTTAATTCT  350

seq1  GAAAACGATGATCCCAAGCTGGGGCAGGCTGGGTGACAAGGGACTCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACGATGATCCCAAGCTGGGGCAGGCTGGGTGACAAGGGACTCCCCA  400

seq1  CAGAAGGGAGCAACAGTGACAATAGGCCAGACGCCCCGGAGCTCCCAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGGAGCAACAGTGACAATAGGCCAGACGCCCCGGAGCTCCCAGGA  450

seq1  ACGGGACCACCAACCAAAGAATACACATGGAGAGACCCATGGCGCTGGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGGACCACCAACCAAAGAATACACATGGAGAGACCCATGGCGCTGGCC  500

seq1  ACATATGTGGCGGAGGGTGGCCTTGTTGGACATCAGTGGGAGGAGAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATGTGGCGGAGGGTGGCCTTGTTGGACATCAGTGGGAGGAGAGGCC  550

seq1  CTTGGGCCTGAGGGTGTTCGATGCCCCAGCGTAGGGGAATGCCAGGGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCCTGAGGGTGTTCGATGCCCCAGCGTAGGGGAATGCCAGGGTGG  600

seq1  GAGGACTGGAGTGGGTGGGTGGGGGA  626
      ||||||||||||||||||||||||||
seq2  GAGGACTGGAGTGGGTGGGTGGGGGA  626