BAC Information

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BAC

Clone NameB6Ng01-057D05
Chromosome5 (Build37)
Map Location 14,256,977 - 14,257,941
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3a, LOC208055, LOC626053, Speer3, EG626067, LOC668085, LOC384149, LOC384148, Sema3e, LOC100042957
Downstream genePclo, ENSMUSG00000033219, LOC624245, Speer8-ps1, Speer4c, Speer4d, 4930572O03Rik, Speer7-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057D05.bB6Ng01-057D05.g
ACCDH879142DH879143
length9591,149
definitionDH879142|Mus musculus domesticus DNA, BAC clone: B6Ng01-057D05, 5' end.DH879143|Mus musculus domesticus DNA, BAC clone: B6Ng01-057D05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaatgttctttctgagaaattgttgtcaatttttccaagaaggaa
aaaatatcattaatctctctttatagcagaggagtttatttagtccatgc
tagttttctagaaacatcaggggggaaaatcctttcagcattctattctc
cagacagaagttggaaaatgagcatgcccccaaatagcaactatttgtga
gttgggtggtgggagattattacaagcctcaagttctcttttaatgtatc
caaacttttgtcttccctactatatttttagagtagggcgagattgttta
aataaaatttcaaattaaaagaatctctatttgagaggtttgttttgtag
tcaaattttatgctgttggtatgtacaatgtttaaaataatttggtgcca
aattcaggaatagtgggaaaatcattgtggccctgccatgctgtcagtgc
gtaacttgagtaagcaaacctacagctatcatctctgagaaaataggata
gagtttatcctggaacccgatatgagtgaccactgacttggaacagggat
ttatgttactacaagtaccttgttctaatatagtcacagattcacaatgt
ttatatagtaagaaaacaacagaaagcaatggatcaagccttcttcaaat
atattggtggaaagaattggctggcaaactacagacaagtgaggacacat
gagctgtgcatttcagatatggtctgatggcattcttattaacttttagc
tgagtgcagagtagcagtctgttaatatactctaaaagaattacctgata
gccacaaatatgtgagttcagatatccaggcaatgagtagctagctatca
aaggggtaaagatacaccaaagtaatttggtttcaacctgcacattttca
ttctcacatcatggacattcagccagtgaatcattcatgtagaatcttca
tgtagtctg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatta
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccgggcctagcaaaca
cagaagtggatgctcacagtcagctaatggatggatcacagggctcccaa
tggaggagctagagaagtacccaggagctaaagggatcttcaactcttat
agtggaacaacatttatgactaccagtaccctggagctcttggactctag
ctgccattgttcaaagatggcctatcgccatcctggaaaaaagccattga
cacaactgtggtctcgtcacggaagccaggcaaggtatagttgtagtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_14256977_14257941
seq2: B6Ng01-057D05.b_45_1003

seq1  GAATTCAATGTTCTTTCTGAGAAATTGTTGTCAATTTTTCCAAGAAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTTCTTTCTGAGAAATTGTTGTCAATTTTTCCAAGAAGGAA  50

seq1  AAAATATCATTAATCTCTCTTTATAGCAGAGGAGTTTATTTAGTCCATGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATCATTAATCTCTCTTTATAGCAGAGGAGTTTATTTAGTCCATGC  100

seq1  TAGTTTTCTAGAAACATCAGGGGGGAAAATCCTTTCAGCATTCTATTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTCTAGAAACATCAGGGGGGAAAATCCTTTCAGCATTCTATTCTC  150

seq1  CAGACAGAAGTTGGAAAATGAGCATGCCCCCAAATAGCAACTATTTGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGAAGTTGGAAAATGAGCATGCCCCCAAATAGCAACTATTTGTGA  200

seq1  GTTGGGTGGTGGGAGATTATTACAAGCCTCAAGTTCTCTTTTAATGTATC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTGGTGGGAGATTATTACAAGCCTCAAGTTCTCTTTTAATGTATC  250

seq1  CAAACTTTTGTCTTCCCTACTATATTTTTAGAGTAGGGCGAGATTGTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTTGTCTTCCCTACTATATTTTTAGAGTAGGGCGAGATTGTTTA  300

seq1  AATAAAATTTCAAATTAAAAGAATCTCTATTTGAGAGGTTTGTTTTGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATTTCAAATTAAAAGAATCTCTATTTGAGAGGTTTGTTTTGTAG  350

seq1  TCAAATTTTATGCTGTTGGTATGTACAATGTTTAAAATAATTTGGTGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTTATGCTGTTGGTATGTACAATGTTTAAAATAATTTGGTGCCA  400

seq1  AATTCAGGAATAGTGGGAAAATCATTGTGGCCCTGCCATGCTGTCAGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGGAATAGTGGGAAAATCATTGTGGCCCTGCCATGCTGTCAGTGC  450

seq1  GTAACTTGAGTAAGCAAACCTACAGCTATCATCTCTGAGAAAATAGGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTGAGTAAGCAAACCTACAGCTATCATCTCTGAGAAAATAGGATA  500

seq1  GAGTTTATCCTGGAACCCGATATGAGTGACCACTGACTTGGAACAGGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTATCCTGGAACCCGATATGAGTGACCACTGACTTGGAACAGGGAT  550

seq1  TTATGTTACTACAAGTACCTTGTTCTAATATAGTCACAGATTCACAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTACTACAAGTACCTTGTTCTAATATAGTCACAGATTCACAATGT  600

seq1  TTATATAGTAAGAAAACAACAGAAAGCAATGGATCAAGCCTTCTTCAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATAGTAAGAAAACAACAGAAAGCAATGGATCAAGCCTTCTTCAAAT  650

seq1  ATATTGGTGGAAAGAATTGGCTGGCAAACTACAGACAAGTGAGGACACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGGTGGAAAGAATTGGCTGGCAAACTACAGACAAGTGAGGACACAT  700

seq1  GAGCTGTGCATTTCAGATATGGTCTGATGGCATTCTTATTAACTTTTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGTGCATTTCAGATATGGTCTGATGGCATTCTTATTAACTTTTAGC  750

seq1  TGAGTGCAGAGTAGCAGTCTGTTAATATACTCTAAAAGAATTTACCTGAT  800
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGAGTGCAGAGTAGCAGTCTGTTAATATACTCTAAAAGAA-TTACCTGAT  799

seq1  AGCCACAAATATGTGAG-TCAGATATCCAGGCAATGAGTAGCTAGCTATC  849
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGCCACAAATATGTGAGTTCAGATATCCAGGCAATGAGTAGCTAGCTATC  849

seq1  AAAGGGGTAAAGATACACCAAAGTAATTTGGTTTCAACCTGCAACATTTT  899
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AAAGGGGTAAAGATACACCAAAGTAATTTGGTTTCAACCTGC-ACATTTT  898

seq1  CATTCTCCACCATCATGGACATTTCAGCCAGTGAATCAATCATGTAGAAT  949
      |||||||   ||||||||||| |||||||||||||||| |||||||||||
seq2  CATTCTC--ACATCATGGACA-TTCAGCCAGTGAATCATTCATGTAGAAT  945

seq1  CTTCAATGTAGGTCTG  965
      |||| ||||| |||||
seq2  CTTC-ATGTA-GTCTG  959