BAC Information

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BAC

Clone NameB6Ng01-057K24
Chromosome5 (Build37)
Map Location 56,165,255 - 56,165,821
singlet/doubletsinglet
Overlap genenone
Upstream geneEG666405
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057K24.bB6Ng01-057K24.g
ACCDH879484DH879485
length1,222939
definitionDH879484|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K24, 5' end.DH879485|Mus musculus domesticus DNA, BAC clone: B6Ng01-057K24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcaccttttgcagatgatat
gatagtatatataagtgaccctaaaaattctaccagagaactcctaaacc
tgataaacggcttcggtgaagtagctggatataaaataaactcaaacaag
tcaatggcctttctctatacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatcttggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaaatct
ctgaagaaagaaattaaggaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaattctcatcaaaattccaattcaattcttc
accgaattggaaggagcaatttgcaaatttgtctgaaataacaaaaaacc
taggatagcaaaaagtcttctcaaggataaaagaacttctggcggaatca
ccatgccagacctaaagctttactatagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatgaattgaagac
ccagaaatgaacccacacacctatggtcacttgatcttgacaagggagct
aaaccatccagtggaagaaagacagcattttcaacaattgtgctggcaca
ctggtgttatcatgagagatgcgatcgatccatactatctcctgtactag
tcaaatctagtggatcagacttcacataaaatcagagacactgaacttat
agaagagaagggggaagcctgagatttgtcatgggaaatctgaacagatc
agcatgctttgcttaaatcgaattgacaatggacctataaatctaggttc
tgcaggcaagatccgctatagacaagacccacgattgaggatctaccttc
tactcgatggactatatgtaag
gaattccagtgtagggataaggccactaaccaacccataaaaccttccac
ccagaatttgtcctgcctacaagtgtgggaacgaagatgaggcagagact
gatgaaacgcccaaccaaagcctggtccattttgaagacccatcccatgg
gcaaaaaccaatccctgacactattaatgatactttattatgcttgcagc
caggatcctaaataaatgtcttctgagggcctccattaagcagctgactg
aaacatgcagatacccacagacaaacatttgatatagctctggcgtcttg
tggcagacttgggggaaggatcctcagaaggatttgggactacacaggaa
gacgaacagaatcaaacagcttagacccttggaacctcccagaggctgag
ccacaaaccaaagagcattcatgtgcagcttggtctccacgagggtcccc
aaacaactggaactcttgcttgtttgtagatcctgttccctgactggact
gccttgcctagccttgcaaagacttgatgtgcgatagtgggttgtttcac
aatgggagaaaggggcctaatggagaagggctgtacgtgtggtgtctgca
agggacgtaggggctgtgactgtgatgtatattgagtatataaataaaat
aaatgtataaaaatatattgatcatttctttttctcacggcttttctaag
gtatacttacacttatataccttttcttcatttccccttccctgcccact
cactcttcctcttcctctatgaatctctttctcacatctctgtctcattt
gtttattttgtggttggctgattttaaccagggccatctatacgaacatc
gtatttgagcaatcacatttggtctctaagcattgggaataaaactggag
ataaaactgcacttctccaagctctgtcacctgtcaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_56165255_56165821
seq2: B6Ng01-057K24.g_443_1006 (reverse)

seq1  CATTGACAGGTGACAGATGCTTGGAGAAGTGCAGTTATTATCTCCAGTTT  50
      ||||||||||||||||| |||||||||||||||||| |||||||||||||
seq2  CATTGACAGGTGACAGA-GCTTGGAGAAGTGCAGTT-TTATCTCCAGTTT  48

seq1  TATACCCAATGCTTAGAGGACCAAATGTTGATTGCTCAAATACGATGTTC  100
      ||| ||||||||||||| ||||||||| ||||||||||||||||||||||
seq2  TATTCCCAATGCTTAGA-GACCAAATG-TGATTGCTCAAATACGATGTTC  96

seq1  GTATAGATGGCCCTGGTTAAAATCAGCCAACCACAAAATAAAACAAATGA  150
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTATAGATGGCCCTGGTTAAAATCAGCCAACCACAAAAT-AAACAAATGA  145

seq1  GACAGAGATGTGAGAAAGAGATTCATAGAGG-AGAGGAAGAGTGAGTGGG  199
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GACAGAGATGTGAGAAAGAGATTCATAGAGGAAGAGGAAGAGTGAGTGGG  195

seq1  CAGGGAAGGGGAAATGAAGAAAAGGTATATAAGTGTAAGTATACCTTAG-  248
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CAGGGAAGGGGAAATGAAGAAAAGGTATATAAGTGTAAGTATACCTTAGA  245

seq1  AAAGCCGTGAGAAAAAGAAATGATCAATATATTTTTATACATTTATTTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCGTGAGAAAAAGAAATGATCAATATATTTTTATACATTTATTTTA  295

seq1  TTTATATACTCAATATACATCACAGTCACAGCCCCTACGTCCCTTGCAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATACTCAATATACATCACAGTCACAGCCCCTACGTCCCTTGCAGA  345

seq1  CACCACACGTACAGCCCTTCTCCATTAGGCCCCTTTCTCCCATTGTGAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACACGTACAGCCCTTCTCCATTAGGCCCCTTTCTCCCATTGTGAAA  395

seq1  CAACCCACTATCGCACATCAAGTCTTTGCAAGGCTAGGCAAGGCAGTCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACTATCGCACATCAAGTCTTTGCAAGGCTAGGCAAGGCAGTCCA  445

seq1  GTCAGGGAACAGGATCTACAAACAAGCAAGAGTTCCAGTTGTTTGGGGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGAACAGGATCTACAAACAAGCAAGAGTTCCAGTTGTTTGGGGAC  495

seq1  CCTCGTGGAGACCAAGCTGCACATGAATGCTCTTTGGTTTGTGGCTCAGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCGTGGAGACCAAGCTGCACATGAATGCTCTTTGGTTTGTGGCTCAGC  545

seq1  CTCTGGGAGGTTCCAAGGG  567
      |||||||||||||||||||
seq2  CTCTGGGAGGTTCCAAGGG  564