BAC Information

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BAC

Clone NameB6Ng01-060F21
Chromosome5 (Build37)
Map Location 98,198,440 - 98,199,566
singlet/doubletsinglet
Overlap genenone
Upstream geneFras1, Anxa3, EG666266, LOC670358, Bmp2k, Paqr3, LOC100040598, EG433923, EG666293, C80008, Gk2
Downstream geneAntxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5, 1700007G11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060F21.bB6Ng01-060F21.g
ACCDH881358DH881359
length1,1031,053
definitionDH881358|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F21, 5' end.DH881359|Mus musculus domesticus DNA, BAC clone: B6Ng01-060F21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctggaggcctcttggtgtttttgtgctttcagtgtttggagttgt
tggatgcttcttacagctcttctcataggaggtcagggttccatgagcag
gtgccaccaggcccatttcagagatgttctctgagtgagctcactcagca
tcgggcattttttcactttaataatactcactgtgaaataaattattcct
attaactctctctctgcctgaaggctaaaaatacagagctatgtcttttg
gtttccctgtggatggctcttgtgatggggctgtaaaggcatacattgct
ctatcccagagttgggttaccatcaaggagatgggagtgaggcattgatg
gctgtccagagcataatttactagcgcttgtctttgtctcaccaaatatc
tcacgccacaccaaatgcccttgaactttatttgaaaggattagctattt
gggagtctcaagggtaagatttttacccattgttaccagtgctttcatct
ccgcaaagcctaactcaaaaaaacgggtataaagtagactgtgagtaaat
gaataattgaataaatcattaattcatgtcacaaacgcaatggctgcttc
cgttttccctcatggtgatagatccagagaatgtgactcaagaccattag
taatggaagtaaactgtcaagcaaaaccaaggaattatatttgctttagc
tgtgtaattaaattaaagtattatttttcttgaatttggcagaacacttg
gaaatctggatgatgcttcttggaatttttaaataaacctattaatgaca
agaggacccccaaattgccacattaaaaaataaatgcacaaaacaattcg
ttatcctatgctcacaaagcactgcttaccaatattaacaatccaactga
tatcaagaacttagtcccctctatggagtagaccacagggaaatatcaag
agtgttaacagctggcttgttataactcagactttttttcctttacagag
aaacaaatggagagcacaaagcattccacacattctgtatgagatacggt
gcagcgaggctatgggatgggatccaccacattccagacctacatttata
tcg
gaattctctgtttagatctgttcccgattttttgcttgggttatttgaac
ttttggggcttaacttctttagttttttatatattttggatattatccct
ctctcagatgtagggttagtgaagatttttttccccaatctgtaggttgt
gatttgtcctattgattgtgtcctttgccttactgaagctttgcagtttc
ataaggtcccatttatcaattcttgatattagaggctgaaccattggtat
tctgttcaggaaatttctccctgtgccaatgagtctgcggttctttcttt
ctttctcttttattagattcgttgtatctggttttatgttgatgtccttg
atccacttggacttgagctttgtacaaggtgataaatatgggtctatttt
cattctcccacatacagacaactagttaaaccagctccatttattgaaga
tgctttcttttttccactgtgtttttggcttctttgttaaagatcaagtg
tccataggtatatgggtttatttctaggtctccaattctattctattgat
tgacctgaaagtctctgtatcgataccatacagtttttattactgttgct
ttgtagtacagcttgaggtcaaggatggttcctcccccagaagaacattt
attgttgagaattgctctggctatcctgggttttttgttcttccatatga
agttgagaatttctctttcaatatctgtgaagaattgtgttgggattttg
atggggattgcattgaatctgtatattgcttttgttaaaaaggccacttt
caatatgtcaatcctactgatccatgatcattgaagactttcattatgtg
aaagctacttgatttcttttttacaggagttgaatttcatatcaacgatt
ttcacttgcttccaaaagtacatacagttattaaaatagataacatacat
acacgatctctgtgatggattttaaatgatgacctgcatcctgcgatgaa
tctgcaatgatggcgtgaatgaggatcaggtgtggtctgaaattgactta
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_98198440_98199566
seq2: B6Ng01-060F21.b_44_1146 (reverse)

seq1  CGATATTAGAATGTAGGGTCTGGGATGTGGTGTGAT-CCATCCCATAAGG  49
      ||||||   |||||| ||||||| |||||||| ||| ||||||||||  |
seq2  CGATAT--AAATGTA-GGTCTGGAATGTGGTG-GATCCCATCCCATA--G  44

seq1  CTTCTGCTTGCACCGTATCTCATACAGAATTGTTGTGGAATTGCTTTTGT  99
      | || || ||||||||||||||||||||||   ||||||| ||| |||||
seq2  CCTC-GC-TGCACCGTATCTCATACAGAAT--GTGTGGAA-TGC-TTTGT  88

seq1  GCTTCTCCATTTGTTTTCTCTTGTAAAGGAAAAAAAAAGTCTGAGTATAT  149
      || |||||||||| |||||| ||||||||  ||||||||||||||| || 
seq2  GC-TCTCCATTTG-TTTCTC-TGTAAAGG--AAAAAAAGTCTGAGT-TA-  131

seq1  TAACAAGCCAGCTGTTAACACTTCTTTGATATTTCCCTGTGGTCTACTCC  199
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  TAACAAGCCAGCTGTTAACACT--CTTGATATTTCCCTGTGGTCTACTCC  179

seq1  ATTAGAGGGGACTAAGTTCTTGATATCAGTTGGATTTGTTAATTATTGGT  249
      | |||||||||||||||||||||||||||||||| ||||||| |||||||
seq2  A-TAGAGGGGACTAAGTTCTTGATATCAGTTGGA-TTGTTAA-TATTGGT  226

seq1  AAGCAGTGCTTTGTGAGCATAGGATAACGAATTTGTTTTGTGCATTTATT  299
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGCAGTGCTTTGTGAGCATAGGATAACGAA-TTGTTTTGTGCATTTATT  275

seq1  TTTTAATGTGGCAATTTGGGGGTCCTCTTGTCATTAATAGGTTTATTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATGTGGCAATTTGGGGGTCCTCTTGTCATTAATAGGTTTATTTAA  325

seq1  AAATTCCAAGAAGCATCATCCAGATTTCCAAGTGTTCTGCCAAATTCAAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCCAAGAAGCATCATCCAGATTTCCAAGTGTTCTGCCAAATTCAAG  375

seq1  AAAAATAATACTTTAATTTAATTACACAGCTAAAGCAAATATAATTCCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATACTTTAATTTAATTACACAGCTAAAGCAAATATAATTCCTT  425

seq1  GGTTTTGCTTGACAGTTTACTTCCATTACTAATGGTCTTGAGTCACATTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTGCTTGACAGTTTACTTCCATTACTAATGGTCTTGAGTCACATTC  475

seq1  TCTGGATCTATCACCATGAGGGAAAACGGAAGCAGCCATTGCGTTTGTGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATCTATCACCATGAGGGAAAACGGAAGCAGCCATTGCGTTTGTGA  525

seq1  CATGAATTAATGATTTATTCAATTATTCATTTACTCACAGTCTACTTTAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAATTAATGATTTATTCAATTATTCATTTACTCACAGTCTACTTTAT  575

seq1  ACCCGTTTTTTTGAGTTAGGCTTTGCGGAGATGAAAGCACTGGTAACAAT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCGTTTTTTTGAGTTAGGCTTTGCGGAGATGAAAGCACTGGTAACAAT  625

seq1  GGGTAAAAATCTTACCCTTGAGACTCCCAAATAGCTAATCCTTTCAAATA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAAAATCTTACCCTTGAGACTCCCAAATAGCTAATCCTTTCAAATA  675

seq1  AAGTTCAAGGGCATTTGGTGTGGCGTGAGATATTTGGTGAGACAAAGACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAAGGGCATTTGGTGTGGCGTGAGATATTTGGTGAGACAAAGACA  725

seq1  AGCGCTAGTAAATTATGCTCTGGACAGCCATCAATGCCTCACTCCCATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCTAGTAAATTATGCTCTGGACAGCCATCAATGCCTCACTCCCATCT  775

seq1  CCTTGATGGTAACCCAACTCTGGGATAGAGCAATGTATGCCTTTACAGCC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATGGTAACCCAACTCTGGGATAGAGCAATGTATGCCTTTACAGCC  825

seq1  CCATCACAAGAGCCATCCACAGGGAAACCAAAAGACATAGCTCTGTATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACAAGAGCCATCCACAGGGAAACCAAAAGACATAGCTCTGTATTT  875

seq1  TTAGCCTTCAGGCAGAGAGAGAGTTAATAGGAATAATTTATTTCACAGTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCTTCAGGCAGAGAGAGAGTTAATAGGAATAATTTATTTCACAGTG  925

seq1  AGTATTATTAAAGTGAAAAAATGCCCGATGCTGAGTGAGCTCACTCAGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTATTAAAGTGAAAAAATGCCCGATGCTGAGTGAGCTCACTCAGAG  975

seq1  AACATCTCTGAAATGGGCCTGGTGGCACCTGCTCATGGAACCCTGACCTC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCTCTGAAATGGGCCTGGTGGCACCTGCTCATGGAACCCTGACCTC  1025

seq1  CTATGAGAAGAGCTGTAAGAAGCATCCAACAACTCCAAACACTGAAAGCA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAGAAGAGCTGTAAGAAGCATCCAACAACTCCAAACACTGAAAGCA  1075

seq1  CAAAAACACCAAGAGGCCTCCAGAATTC  1127
      ||||||||||||||||||||||||||||
seq2  CAAAAACACCAAGAGGCCTCCAGAATTC  1103