BAC Information

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BAC

Clone NameB6Ng01-061B14
Chromosome5 (Build37)
Map Location 97,483,870 - 97,662,091
singlet/doubletdoublet
Overlap geneBmp2k, Paqr3, LOC100040598
Upstream geneCnot6l, LOC100040559, Mrpl1, Fras1, Anxa3, EG666266, LOC670358
Downstream geneEG433923, EG666293, C80008, Gk2, Antxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061B14.bB6Ng01-061B14.g
ACCDH881876DH881877
length1,0671,062
definitionDH881876|Mus musculus domesticus DNA, BAC clone: B6Ng01-061B14, 5' end.DH881877|Mus musculus domesticus DNA, BAC clone: B6Ng01-061B14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,661,021 - 97,662,091)(97,483,870 - 97,484,927)
sequence
gaattctagactacaagctataagattaaataaaccgttttttctccaca
ttgcttttggccatggtcttttatcactacaataagaaccctaattaaaa
caataccttaatgcaatcggaggttctaaacaaaaaacatagcaatttat
ctgaatttcactatggccaacagactgagatatcactagctcttttgatt
cataagcttcctcattttctgttttcctgattggagctcagggaaatatt
accttttggaccctataggacataatattcatatattatacttccattca
ttcctgtaagtttctgccctttttcttttatataatttcatatcaatgca
cccaacacaaaccaacatacattattaaatgtagagagcagagggattcc
tgagtgagtagattccagactgaccatgctctgctgatgtgggtgtggtc
acaccaaagaccttctaacctcaggctcagcaggaaggcaaagcattggg
gtggaggtagttgtcaagtgagtgtgtcaatagtgtgtgcagaaaatatg
cactatagctttctacccctgaatattcatgacttcaggaccccttccct
gcagagactgctctgacagagatgaccttgcctctttgattcagctgaat
actatccattctgcctcgttcatctgtatgtaataacctcaccactctgc
tcaactgtgtatgacaaacacaccgagattccaggatgctctattcaaaa
gcccagaccacataagatcgtttctgtgtgtccatgcgtctaactgtctg
tcttttcttcattctctcaacataccagtggtccatccttggggaatatg
aatgatgcagccactaaaactactaaaaatgtctttacccttttccctga
gaactacagattattgagtcatcttgtttcacaacttcttcaacaaaaat
tttacccaggtatcataggacatcatagcatcataacacctttttaattc
accatgcctaaatagttttggggaggtttgcggggcttgtttgggtttgt
ttggtgggttggggtct
gaattcttttcttccatcaactcttcccgagccgatgactgctactgaag
ctgctgctaggaaaagccagatgaaagccaggtaggcagggatgcgctgt
ggccgatgggcatcttgtcagaggaaaggctgtagtttccattccataaa
cactgtctccacttacccagtatgccgagttgttcagtctgtggtgctag
agcttagatggtaggtgaggaaaaacaaaagctcaaaggtacactagagg
gcctgacagcaggctcctgtgagcgcccgctcaccagggagggcctgagg
accgacccggactgtaggactgttgatgttgcagggggccgtctctgtgg
acatgtggctgtcgtcatttttgactctggctagtctgaattcagggaac
tgcagaggcgagttaatagctattaagcctattacttctatttaaggaag
gaaaaaataattgtcacaggccattagtgtatgtagtttgtagaatttat
gtgtgtatgtgtgcttggtaaagaatcaagtttgaaatcttatttttcag
taatttactccattagtaagcttttgcaggcaacttgattattaaaatga
actatgattggctattatgtaaatgatcttgccgacttcattacattttt
agacagcttgtaccataccactctggtcatctggtcatctcccctgttat
tattaggagacctcatacctacaatatgcttatacaattttctggaaaaa
aaattgccttccaaagtttttttttttaataacttcatgcaccataatag
cttttgatcatgtgtgcttcccttaccattcttgtctcctcccactgccc
cccttcactttctcttcccaaacaacccccttctatattacttcctgtct
ttcttttatcacctactgaattcctttaaggtaccaaccgggattttctg
aatgttgtcatgcagtttttgttactttctcttttagaaagtataagttg
ttggggggcttccttctagtgtatcataaaggtattattgaaagaagggg
tagtgttgtgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_97661021_97662091
seq2: B6Ng01-061B14.b_47_1113 (reverse)

seq1  AGACCCCAACCCAACCAAAACAAACCAAAACAAGCCCCGCAAACCTCCCC  50
      |||||||||||||  | ||||||||| |||||||||||||||||||||||
seq2  AGACCCCAACCCA--CCAAACAAACCCAAACAAGCCCCGCAAACCTCCCC  48

seq1  AAAACTATTTAGGCATGGTGAATTAAAAAGGGTGTTATGATGCTATGATG  100
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAAACTATTTAGGCATGGTGAATTAAAAA-GGTGTTATGATGCTATGATG  97

seq1  TCCTATGATACCTGGGTAAAATTTTTGTTGAAGAAGTTGTGAAACAAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATGATACCTGGGTAAAATTTTTGTTGAAGAAGTTGTGAAACAAGAT  147

seq1  GACTCAATAAATCTGTAGTTCTCAGGGAAAGGGTTAAAGACATTTTTAGT  200
      |||||||| ||||||||||||||||||||| || ||||||||||||||||
seq2  GACTCAAT-AATCTGTAGTTCTCAGGGAAAAGGGTAAAGACATTTTTAGT  196

seq1  AGTTTTAGTGGCTGCATCATTCATATTCCCCAAGGATGGACCACTGGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGTGGCTGCATCATTCATATTCCCCAAGGATGGACCACTGGTAT  246

seq1  GTTGAGAGAATGAAGAAAAGACAGACAGTTAGACGCATGGACACACAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAGAATGAAGAAAAGACAGACAGTTAGACGCATGGACACACAGAA  296

seq1  ACGATCTTATGTGGTCTGGGCTTTTGAATAGAGCATCCTGGAATCTCGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATCTTATGTGGTCTGGGCTTTTGAATAGAGCATCCTGGAATCTCGGT  346

seq1  GTGTTTGTCATACACAGTTGAGCAGAGTGGTGAGGTTATTACATACAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGTCATACACAGTTGAGCAGAGTGGTGAGGTTATTACATACAGAT  396

seq1  GAACGAGGCAGAATGGATAGTATTCAGCTGAATCAAAGAGGCAAGGTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGAGGCAGAATGGATAGTATTCAGCTGAATCAAAGAGGCAAGGTCAT  446

seq1  CTCTGTCAGAGCAGTCTCTGCAGGGAAGGGGTCCTGAAGTCATGAATATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCAGAGCAGTCTCTGCAGGGAAGGGGTCCTGAAGTCATGAATATT  496

seq1  CAGGGGTAGAAAGCTATAGTGCATATTTTCTGCACACACTATTGACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGTAGAAAGCTATAGTGCATATTTTCTGCACACACTATTGACACAC  546

seq1  TCACTTGACAACTACCTCCACCCCAATGCTTTGCCTTCCTGCTGAGCCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGACAACTACCTCCACCCCAATGCTTTGCCTTCCTGCTGAGCCTG  596

seq1  AGGTTAGAAGGTCTTTGGTGTGACCACACCCACATCAGCAGAGCATGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGAAGGTCTTTGGTGTGACCACACCCACATCAGCAGAGCATGGTC  646

seq1  AGTCTGGAATCTACTCACTCAGGAATCCCTCTGCTCTCTACATTTAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGAATCTACTCACTCAGGAATCCCTCTGCTCTCTACATTTAATAA  696

seq1  TGTATGTTGGTTTGTGTTGGGTGCATTGATATGAAATTATATAAAAGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTTGGTTTGTGTTGGGTGCATTGATATGAAATTATATAAAAGAAA  746

seq1  AAGGGCAGAAACTTACAGGAATGAATGGAAGTATAATATATGAATATTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGAAACTTACAGGAATGAATGGAAGTATAATATATGAATATTAT  796

seq1  GTCCTATAGGGTCCAAAAGGTAATATTTCCCTGAGCTCCAATCAGGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATAGGGTCCAAAAGGTAATATTTCCCTGAGCTCCAATCAGGAAAA  846

seq1  CAGAAAATGAGGAAGCTTATGAATCAAAAGAGCTAGTGATATCTCAGTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAATGAGGAAGCTTATGAATCAAAAGAGCTAGTGATATCTCAGTCT  896

seq1  GTTGGCCATAGTGAAATTCAGATAAATTGCTATGTTTTTTGTTTAGAACC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCCATAGTGAAATTCAGATAAATTGCTATGTTTTTTGTTTAGAACC  946

seq1  TCCGATTGCATTAAGGTATTGTTTTAATTAGGGTTCTTATTGTAGTGATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGATTGCATTAAGGTATTGTTTTAATTAGGGTTCTTATTGTAGTGATA  996

seq1  AAAGACCATGGCCAAAAGCAATGTGGAGAAAAAACGGTTTATTTAATCTT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCATGGCCAAAAGCAATGTGGAGAAAAAACGGTTTATTTAATCTT  1046

seq1  ATAGCTTGTAGTCTAGAATTC  1071
      |||||||||||||||||||||
seq2  ATAGCTTGTAGTCTAGAATTC  1067

seq1: chr5_97483870_97484927
seq2: B6Ng01-061B14.g_70_1131

seq1  GAATTCTTTTCTTCCATCAACTCTTCCCGAGCCGATGACTGCTACTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCTTCCATCAACTCTTCCCGAGCCGATGACTGCTACTGAAG  50

seq1  CTGCTGCTAGGAAAAGCCAGATGAAAGCCAGGTAGGCAGGGATGCGCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGCTAGGAAAAGCCAGATGAAAGCCAGGTAGGCAGGGATGCGCTGT  100

seq1  GGCCGATGGGCATCTTGTCAGAGGAAAGGCTGTAGTTTCCATTCCATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGATGGGCATCTTGTCAGAGGAAAGGCTGTAGTTTCCATTCCATAAA  150

seq1  CACTGTCTCCACTTACCCAGTATGCCGAGTTGTTCAGTCTGTGGTGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCTCCACTTACCCAGTATGCCGAGTTGTTCAGTCTGTGGTGCTAG  200

seq1  AGCTTAGATGGTAGGTGAGGAAAAACAAAAGCTCAAAGGTACACTAGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTAGATGGTAGGTGAGGAAAAACAAAAGCTCAAAGGTACACTAGAGG  250

seq1  GCCTGACAGCAGGCTCCTGTGAGCGCCCGCTCACCAGGGAGGGCCTGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGACAGCAGGCTCCTGTGAGCGCCCGCTCACCAGGGAGGGCCTGAGG  300

seq1  ACCGACCCGGACTGTAGGACTGTTGATGTTGCAGGGGGCCGTCTCTGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACCCGGACTGTAGGACTGTTGATGTTGCAGGGGGCCGTCTCTGTGG  350

seq1  ACATGTGGCTGTCGTCATTTTTGACTCTGGCTAGTCTGAATTCAGGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTGGCTGTCGTCATTTTTGACTCTGGCTAGTCTGAATTCAGGGAAC  400

seq1  TGCAGAGGCGAGTTAATAGCTATTAAGCCTATTACTTCTATTTAAGGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGCGAGTTAATAGCTATTAAGCCTATTACTTCTATTTAAGGAAG  450

seq1  GAAAAAATAATTGTCACAGGCCATTAGTGTATGTAGTTTGTAGAATTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATAATTGTCACAGGCCATTAGTGTATGTAGTTTGTAGAATTTAT  500

seq1  GTGTGTATGTGTGCTTGGTAAAGAATCAAGTTTGAAATCTTATTTTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTATGTGTGCTTGGTAAAGAATCAAGTTTGAAATCTTATTTTTCAG  550

seq1  TAATTTACTCCATTAGTAAGCTTTTGCAGGCAACTTGATTATTAAAATGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTACTCCATTAGTAAGCTTTTGCAGGCAACTTGATTATTAAAATGA  600

seq1  ACTATGATTGGCTATTATGTAAATGATCTTGCCGACTTCATTACATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGATTGGCTATTATGTAAATGATCTTGCCGACTTCATTACATTTTT  650

seq1  AGACAGCTTGTACCATACCACTCTGGTCATCTGGTCATCTCCCCTGTTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCTTGTACCATACCACTCTGGTCATCTGGTCATCTCCCCTGTTAT  700

seq1  TATTAGGAGACCTCATACCTACAATATGCTTATACAATTTTCTGGAAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGAGACCTCATACCTACAATATGCTTATACAATTTTCTGGAAAAA  750

seq1  AAATTGCCTTCCAAAGTTTTTTTTTTTAATAACTTCATGCACCATAATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCCTTCCAAAGTTTTTTTTTTTAATAACTTCATGCACCATAATAG  800

seq1  CTTTTGATCATGTGTGCTTCCCTTACCATTCTTGTCTCCTCCCACTGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGATCATGTGTGCTTCCCTTACCATTCTTGTCTCCTCCCACTGCCC  850

seq1  CCCTTCACTTCCTCTTCCCAAACAACCCCCTTCTATATTACTTCCTGTCT  900
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CCCTTCACTTTCTCTTCCCAAACAACCCCCTTCTATATTACTTCCTGTCT  900

seq1  TTCTTTTTATCACCTACTGAATTCCTTTAAGGTACCAACCGGAATTTTCT  950
      ||| |||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTC-TTTTATCACCTACTGAATTCCTTTAAGGTACCAACCGGGATTTTCT  949

seq1  GAAATGTTGTCATGCAGTTTTTTGTTACTTTC-CTTTTAGAAAG-ATAAG  998
      | ||||||||||||||| |||||||||||||| ||||||||||| |||||
seq2  G-AATGTTGTCATGCAG-TTTTTGTTACTTTCTCTTTTAGAAAGTATAAG  997

seq1  -TGTTGGGGGGC-TCCCTCTAGTGGTACATAGAGGTATTA-TGAAAG-AG  1044
       ||||||||||| ||| |||||||   |||| |||||||| |||||| ||
seq2  TTGTTGGGGGGCTTCCTTCTAGTGTATCATAAAGGTATTATTGAAAGAAG  1047

seq1  GGGTAGTG-TGTGCT  1058
      |||||||| ||||||
seq2  GGGTAGTGTTGTGCT  1062