MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-061E03
Chromosome	5 (Build37)
Map Location	8,368,417 - 8,530,016
singlet/doublet	doublet
Overlap gene	Dbf4, Slc25a40, Gm440
Upstream gene	LOC242823, LOC667767, EG546855, Steap4, Sri, LOC433840, Adam22
Downstream gene	Abcb1a, EG330031, Abcb1b, Abcb4, Crot, 4930420K17Rik, Dmtf1, LOC654361, 9330182L06Rik, Grm3
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC242823 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:242823
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 Proteins pseudo : _no_value

name	LOC667767 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins pseudo : _no_value

name	EG546855 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546855 MGI:3646338
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Steap4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117167 MGI:1923560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sri (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109552 MGI:98419
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	LOC433840 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:433840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 235 ESTs, 2 Proteins pseudo : _no_value

name	Adam22 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11496 MGI:1340046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Dbf4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27214 MGI:1351328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slc25a40 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:319653 MGI:2442486
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm440 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:242819 MGI:2685286
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb1a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18671 MGI:97570
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG330031 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:330031 MGI:3643983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Abcb1b (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18669 MGI:97568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Abcb4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18670 MGI:97569
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Crot (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74114 MGI:1921364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930420K17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:652925 MGI:3606159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmtf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23857 MGI:1344415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC654361 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:654361
definition	note : protein phosphatase 1, regulatory (inhibitor) subunit 14B pseudogene pseudo : _no_value

name	9330182L06Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:231014 MGI:2443264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Grm3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108069 MGI:1351340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546855 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82801701 GeneID:546855 MGI:3646338
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : predicted gene, EG546855 transcript_id : XM_889752.1

name	Steap4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131114 GeneID:117167 MGI:1923560
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : STEAP family member 4 transcript_id : NM_054098.3

name	Sri (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430542 GeneID:109552 MGI:98419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorcin transcript_id : NM_025618.2

name	Sri (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124430536 GeneID:109552 MGI:98419
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sorcin transcript_id : NM_001080974.1

name	Adam22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56790898 GeneID:11496 MGI:1340046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 22 transcript_id : NM_001007220.2

name	Adam22 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56790899 GeneID:11496 MGI:1340046
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 22 transcript_id : NM_001007221.1

name	Dbf4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130853 GeneID:27214 MGI:1351328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DBF4 homolog (S. cerevisiae) transcript_id : NM_013726.2

name	Slc25a40 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801661 GeneID:319653 MGI:2442486
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : solute carrier family 25, member 40 transcript_id : NM_178766.3

name	Gm440 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:39930588 GeneID:242819 MGI:2685286
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 440, (NCBI) transcript_id : NM_198620.1

name	Abcb1a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755047 GeneID:18671 MGI:97570
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 1A transcript_id : NM_011076.1

name	EG330031 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374177 GeneID:330031 MGI:3643983
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : predicted gene, EG330031, transcript variant 1 transcript_id : XM_900508.2

name	Abcb1b (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755045 GeneID:18669 MGI:97568
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 1B transcript_id : NM_011075.1

name	Abcb4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6679296 GeneID:18670 MGI:97569
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATP-binding cassette, sub-family B (MDR/TAP), member 4 transcript_id : NM_008830.1

name	Crot (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387204 GeneID:74114 MGI:1921364
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : carnitine O-octanoyltransferase transcript_id : NM_023733.3

name	4930420K17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486625 GeneID:652925 MGI:3606159
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930420K17 gene transcript_id : NM_001081029.1

name	Dmtf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560525 GeneID:23857 MGI:1344415
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin D binding myb-like transcription factor 1 transcript_id : NM_011806.2

name	9330182L06Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142353435 GeneID:231014 MGI:2443264
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9330182L06 gene transcript_id : NM_172706.3

name	Grm3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130617 GeneID:108069 MGI:1351340
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, metabotropic 3 transcript_id : NM_181850.2

name	EG546855 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82801702 GeneID:546855 MGI:3646338
definition	codon_start : 1 product : hypothetical protein protein_id : XP_894845.1

name	Steap4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981509 GeneID:117167 MGI:1923560
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0005886 - plasma membrane [Evidence ISS] GO_function : GO:0050660 - FAD binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006118 - electron transport [Evidence IEA]; GO:0045444 - fat cell differentiation [Evidence ISS] codon_start : 1 note : tumor necrosis factor, alpha-induced protein 9 product : Tnfa-induced adipose-related protein protein_id : NP_473439.2

name	Sri (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430543 CCDS:CCDS19079.1 GeneID:109552 MGI:98419
definition	GO_component : GO:0005622 - intracellular [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : sorcin isoform 2 protein_id : NP_079894.2

name	Sri (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124430537 GeneID:109552 MGI:98419
definition	GO_component : GO:0005622 - intracellular [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : sorcin isoform 1 protein_id : NP_001074443.1

name	Adam22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56790900 GeneID:11496 MGI:1340046
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2; a disintegrin and metalloprotease domain (ADAM) 22; a disintegrin and metalloprotease domain 22 product : a disintegrin and metalloprotease domain 22 isoform b protein_id : NP_001007222.1

name	Adam22 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:55742840 CCDS:CCDS19080.1 GeneID:11496 MGI:1340046
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004222 - metalloendopeptidase activity [Evidence IEA] GO_process : GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1; a disintegrin and metalloprotease domain (ADAM) 22; a disintegrin and metalloprotease domain 22 product : a disintegrin and metalloprotease domain 22 isoform a protein_id : NP_001007221.1

name	Dbf4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7304903 CCDS:CCDS19081.1 GeneID:27214 MGI:1351328
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006260 - DNA replication [Evidence IEA]; GO:0007090 - regulation of S phase of mitotic cell cycle [Evidence ISS]; GO:0007089 - traversing start control point of mitotic cell cycle [Evidence ISS] codon_start : 1 product : activator of S phase kinase protein_id : NP_038754.1

name	Slc25a40 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30520231 GeneID:319653 MGI:2442486
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : mitochondrial carrier family protein protein_id : NP_848881.1

name	Gm440 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:39930589 CCDS:CCDS19083.1 GeneID:242819 MGI:2685286
definition	codon_start : 1 product : hypothetical protein LOC242819 protein_id : NP_941022.1

name	Abcb1a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755048 CCDS:CCDS19084.1 GeneID:18671 MGI:97570
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042623 - ATPase activity, coupled [Evidence IDA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0015893 - drug transport [Evidence IDA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : multi-drug resistance 3; P glycoprotein 3; multiple drug resistant 1a; ATP-binding cassette, sub-family B (MDR/TAP), member 4; ecotropic viral integration site 32 product : ATP-binding cassette, sub-family B (MDR/TAP), member 1A protein_id : NP_035206.1

name	EG330031 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82801587 GeneID:330031 MGI:3643983
definition	codon_start : 1 product : hypothetical protein isoform 1 protein_id : XP_905601.1

name	Abcb1b (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755046 CCDS:CCDS19085.1 GeneID:18669 MGI:97568
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : P glycoprotein 1 product : ATP-binding cassette, sub-family B (MDR/TAP), member 1B protein_id : NP_035205.1

name	Abcb4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679297 CCDS:CCDS19086.1 GeneID:18670 MGI:97569
definition	GO_component : GO:0046581 - intercellular canaliculus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0042626 - ATPase activity, coupled to transmembrane movement of substances [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0017111 - nucleoside-triphosphatase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008559 - xenobiotic-transporting ATPase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : P glycoprotein 2 product : ATP-binding cassette, sub-family B (MDR/TAP), member 4 protein_id : NP_032856.1

name	Crot (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17157983 CCDS:CCDS19087.1 GeneID:74114 MGI:1921364
definition	GO_component : GO:0005777 - peroxisome [Evidence IDA] GO_function : GO:0008458 - carnitine O-octanoyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0015908 - fatty acid transport [Evidence IDA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 product : carnitine O-octanoyltransferase protein_id : NP_076222.1

name	4930420K17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486626 GeneID:652925 MGI:3606159
definition	codon_start : 1 product : hypothetical protein LOC652925 protein_id : NP_001074498.1

name	Dmtf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560526 CCDS:CCDS19088.1 GeneID:23857 MGI:1344415
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : D-interacting myb-like protein; cyclin D binding myb-like transcription factor 1D-interacting myb-like protein product : cyclin D binding myb-like transcription factor 1 protein_id : NP_035936.2

name	9330182L06Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625972 CCDS:CCDS19089.1 GeneID:231014 MGI:2443264
definition	GO_function : GO:0004872 - receptor activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC231014 protein_id : NP_766294.2

name	Grm3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32469489 CCDS:CCDS19090.1 GeneID:108069 MGI:1351340
definition	GO_component : GO:0030424 - axon [Evidence IDA]; GO:0043197 - dendritic spine [Evidence IDA]; GO:0005886 - plasma membrane [Evidence IDA]; GO:0045211 - postsynaptic membrane [Evidence IDA]; GO:0048786 - presynaptic active zone [Evidence NAS]; GO:0042734 - presynaptic membrane [Evidence IDA] GO_function : GO:0005246 - calcium channel regulator activity [Evidence IDA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0001641 - group II metabotropic glutamate receptor activity [Evidence IDA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0051930 - regulation of sensory perception of pain [Evidence NAS]; GO:0007165 - signal transduction [Evidence IEA]; GO:0035249 - synaptic transmission, glutamatergic [Evidence TAS] codon_start : 1 note : G protein-coupled receptor, family C, group 1, member C product : glutamate receptor, metabotropic 3 protein_id : NP_862898.1

name	LOC242823 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:242823
definition	number : 1 pseudo : _no_value

name	LOC667767 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253528 GeneID:667767
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 ESTs, 3 Proteins product : hypothetical LOC667767 pseudo : _no_value transcript_id : XR_034035.1

name	LOC433840 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149253529 GeneID:433840
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 mRNAs, 235 ESTs, 2 Proteins product : similar to ribosomal protein L27 pseudo : _no_value transcript_id : XR_034051.1

clone name	MSMg01-074A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358I12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-471D15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-179L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-148A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151C13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-092D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268K03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-203I13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-546M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-094N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-440E05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-114O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462F24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298M20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162O08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173O19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372N18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504N12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-186P22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052I16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-107J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-280D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-378I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457M07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-502I04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-532B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530H16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-233D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537M06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-140B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-115B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-096E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-425P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-451M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356P03
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-279A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-330O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472F05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-131M13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426N24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-540J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-162B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-382B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407M01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089C22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513N09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-194C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033M09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-326D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-142A02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294O18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094E11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-231K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295L19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-131H12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-043L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-214I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-209B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343B11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031P13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-064H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058F16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087E24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-308O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-126L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-105A20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-170D15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-256N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212A16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-262D09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-017C20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147E08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087I20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-109F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154I06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-205K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295G21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-328F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349N11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197F22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-317C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020O20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-280E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-009G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246D13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160B07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-332P10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-196N14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168H21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310B12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-026F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-077C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-191D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179M01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233J02
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-061E03.b	B6Ng01-061E03.g
ACC	DH881986	DH881987
length	1,152	1,098
definition	DH881986\|Mus musculus domesticus DNA, BAC clone: B6Ng01-061E03, 5' end.	DH881987\|Mus musculus domesticus DNA, BAC clone: B6Ng01-061E03, 3' end.
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(8,528,849 - 8,530,016)	(8,368,417 - 8,369,507)
sequence	gaattcatgataaaatgttaagatatatatgtgacactgtgaactatgtt tcttttcctccctgtcccctaaaagagccttcttatcaccatccctcctt ttctattttgggggataatcattttctgaattcttaggaaattaagcatt tgaattttaacatccttatgtaatgatcttcctgattattaattgaactg ctgtattgaagagagagctacttctcattttccttttttaatgttagtag tttaagttttttaattacatacatacatttgtttgtttgtttgtttgttt gttcatcctgtctctctctctggggataaggagagaaagagaggaaagta cagttgcttgggtcatggcatttgcatggaagtcagatgatggatgcttt gttggtcctatccttccactgtgaaagtcctaggatggaactcaggttac ccggcctggtggccattgcgtttgcctggagaacatctcaccagcctggc tgtagtatttttaaactctgtattctgccagaagttgtgtgccaccttta tcctctcaggtttttcaggcaggacaaattttaagttgagggttttgttc ctgagttgattggtgtcccaatccctccactggaacccttgcctgattgg atttttaaattgtttacttttcaaattaatgcagatgatccaaggaaaac ttggataaattgataaatcttgttcttagactctcagttgatttaactac aagtgatacttttagagtgacttataaaagattatcagtttagcctatgt agtcatcttgtgattctgttgaagtaatactgtagaatacatatgtaaat atacagaagcaaggagaataggaaagtggtcattggtttgtaacagatac aaacactgttagttgaaagcttactaagtctagatcttgttctatctgtt gaggaaaacctgtaaacaatatagacaaaaatctgattcctaatgtccct tatgtaatagaatatttaagggtataggtgacaataatttaatgtcataa atggtgaagaaagctagatttgttttgtcaagacattaaatctcaagcga attgtttaaatctgcttactacaagagattttgagttgtttgcactcaga aa	cccccaagttctgcgaagagccacagggttgctcacgagctactactatt tcttgtgtttccaagagaccatgccttgagtgcaggacaagtcaattttg ccacagatctggactgagggcctactgtgtgctgggcgtgagtcacacat tgtgaggtgcaattaagaaaagcctttttggtaagaattttcccaaggcg gttttcaatgcttttattcctatgaagtattttgctgacaggtgtgtctg tgcacctgccatgtgtatgcagtgtctatggttggaggcccaaagagaat gttgggtccctaggactggggttacagaaggttttgtgggttctgggaat ccaactcattttctctggaggaacacttagtgttttaaacctctgagaca tctctgtccattctccacgcctttttttgaattgacatttgatttcattt taattttgatacctaagggagagtggttaacccaactccaggagaatcag atgtctcccagaggtctaggaagacttgtgaagagtgagtcagccggata ctctgtgatatgtttgcttcctcctatatctgtcagcttcaaacctgcac cagtaatagataaggaaaacgactttgtcaggccgctttccctacctagg gagtggcactattcaaaagtgtagccttgttggaataggtgtaccgctgt gggtgtaggctttaaccccctcctcctagctgcctggaagccagtcttct cctagtagccttcagatgaagtcatagaactctcagctccttcagctcct cctgccatatgcctgcctccacactgccatgctcccatcttgataatgga ctgaacctctgaacctgtaagccaactccaagcaaatattgtccttatag agttgccttggtcatggtgtctgttcacagcaataaagccttaataagac actgcccctctcaaatgtagaggctcaccaggatgaaataataataccac catattacataattagacttgagctttatagattttgaatctatttattg gccattgatccccgaataaaggggaggggtagagggagagagaagaga
quality values	Open. 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Hide. 61 61 43 36 21 12 15 22 20 43 59 59 59 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 52 59 32 35 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 55 44 59 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 61 61 61 61 61 61 61 61 59 55 59 61 61 61 59 59 61 61 61 61 61 61 61 61 59 59 61 59 61 61 61 61 59 61 61 61 61 61 61 59 61 59 59 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 59 61 61 41 59 39 49 43 39 39 61 59 61 59 61 61 61 61 61 59 61 61 61 61 61 59 61 61 61 59 59 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 59 59 59 59 59 59 52 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 55 61 61 61 61 61 61 55 52 52 34 55 55 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 55 49 50 55 55 55 55 49 50 61 61 55 61 61 61 61 55 43 61 61 61 61 55 55 55 55 55 50 49 61 39 61 61 55 61 55 55 55 55 55 55 61 39 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 61 53 61 50 61 61 61 43 53 61 50 53 61 61 53 61 61 50 61 52 61 47 50 50 61 50 53 53 50 50 50 50 50 50 50 61 61 61 53 61 61 61 43 43 32 50 50 47 50 40 45 50 50 50 50 50 50 38 50 50 50 35 61 50 50 53 53 61 61 50 53 61 53 41 38 34 61 61 47 50 61 46 53 61 61 53 61 50 45 30 34 33 47 42 47 46 47 45 35 31 25 42 36 47 31 47 50 33 61 61 47 32 50 57 47 32 38 47 57 45 53 57 38 40 53 57 53 22 35 53 42 42 30 32 39 39 47 53 42 50 47 43 47 45 30 50 32 42 28 53 40 30 27 47 53 45 53 52 45 53 53 47 50 53 31 42 24 47 35 57 53 36 17 52 37 39 39 35 43 47 32 39 32 31 39 28 38 34 52 52 38 20 34 39 50 40 50 38 26 39 39 28 42 40 36 42 50 31 33 42 45 37 45 33 39 35 24 30 26 27 41 39 28 15 50 31 32 40 52 30 37 27 27 45 39 16 33 37 27 38 30 47 34 30 25 40 35 18 31 33 32 30 30 33 42 50 28 47 37 23 34 36 31 8 38 25 35 33 33 33 40 33 35 39 19 23 27 28 37 24 37 33 36 32 47 17 52 22 32 40 20 23 14 53 18 17 40 34 37 32 47 30 20 40 25 27 51 37 37 30 31 35 20 39 30 39 37 37 30 25 27 31 23 18 21 23 13 26 25 22 18 22 17 28 27 30 27 32 10 30 24 30 29 46 24 27 19 20 23 27 21 30 23 29 31 33 29 46 5 25 17 28 26 9 12 23 17 29 29 32 14 23 16 20 31 29 20 29 20 22 26 29 13 29 29 11 19 16 25 28 29 7 20 11 43 27 25 26 14 11 21 41 16 20 9 36 13 23 10 9 21 17 22 12 36 36 22 23 21 27 21 18 41 25 16 29 31 17 19 29 11 17 6 15 14 8 20 13 11 20 33 11 12 28 23 51 14 15 33 10 13 6 29 21 32 13 6 5 8 16 14 10 8 12 13 19 7 6 14 7 22 16 25 15 14 28 10 22 30 19 10 12 12 19 38 28 13 15 8 10 10 13 35 34 29 19 13 27 10 14 8 14 12 5 6 16 12 14 10 33 12 10 8 13 15 11 14 26 17 34 35 18 3 6 16 9 10 31 4 4 4 4 5 10 5 5 5 3 3 3 4 3 1 1 3 3 1 4 6 5 3 3 3 3 5 3 23

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_8528849_8530016
seq2: B6Ng01-061E03.b_46_1197 (reverse)

seq1  TTTCTGAGATTGCCAAACAAACTCAAAAATACTTTGTAGTAAAGGCAGAA  50
      ||||||||  || ||||| ||||| |||||   |||||||||  ||||| 
seq2  TTTCTGAG--TG-CAAAC-AACTC-AAAATCTCTTGTAGTAA--GCAGAT  43

seq1  TTATAACAATTCTGCTTTGAAGACTTAACTGTCTTGACAAAACACAATCT  100
      ||| |||||||| ||||   ||| |||| ||||||||||||||| |||||
seq2  TTA-AACAATTC-GCTT--GAGATTTAA-TGTCTTGACAAAACA-AATCT  87

seq1  AGCTTCTTTCACCCATTTTATGACATTAAATTTATTGTCACCTATACCC-  149
      |||||  ||||||   |||||||||||||| |||||||||||||||||| 
seq2  AGCTTTCTTCACC--ATTTATGACATTAAA-TTATTGTCACCTATACCCT  134

seq1  TAAATATTCTATTACATAAGGGACATTAGGAATCAGATTTTTGTCTATAT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATTCTATTACATAAGGGACATTAGGAATCAGATTTTTGTCTATAT  184

seq1  TGTTTACAGGTTTTTCCTCAACAGATAGAACAAGATCTAGACTTAGTAAG  249
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACAGG-TTTTCCTCAACAGATAGAACAAGATCTAGACTTAGTAAG  233

seq1  CTTTCAACTAACAGTGTTTGTATCTGTTACAAACCAATGACCACTTTCCT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAACTAACAGTGTTTGTATCTGTTACAAACCAATGACCACTTTCCT  283

seq1  ATTCTCCTTGCTTCTGTATATTTACATATGTATTCTACAGTATTACTTCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCTTGCTTCTGTATATTTACATATGTATTCTACAGTATTACTTCA  333

seq1  ACAGAATCACAAGATGACTACATAGGCTAAACTGATAATCTTTTATAAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAATCACAAGATGACTACATAGGCTAAACTGATAATCTTTTATAAGT  383

seq1  CACTCTAAAAGTATCACTTGTAGTTAAATCAACTGAGAGTCTAAGAACAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTAAAAGTATCACTTGTAGTTAAATCAACTGAGAGTCTAAGAACAA  433

seq1  GATTTATCAATTTATCCAAGTTTTCCTTGGATCATCTGCATTAATTTGAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATCAATTTATCCAAGTTTTCCTTGGATCATCTGCATTAATTTGAA  483

seq1  AAGTAAACAATTTAAAAATCCAATCAGGCAAGGGTTCCAGTGGAGGGATT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAACAATTTAAAAATCCAATCAGGCAAGGGTTCCAGTGGAGGGATT  533

seq1  GGGACACCAATCAACTCAGGAACAAAACCCTCAACTTAAAATTTGTCCTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACACCAATCAACTCAGGAACAAAACCCTCAACTTAAAATTTGTCCTG  583

seq1  CCTGAAAAACCTGAGAGGATAAAGGTGGCACACAACTTCTGGCAGAATAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAAACCTGAGAGGATAAAGGTGGCACACAACTTCTGGCAGAATAC  633

seq1  AGAGTTTAAAAATACTACAGCCAGGCTGGTGAGATGTTCTCCAGGCAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTAAAAATACTACAGCCAGGCTGGTGAGATGTTCTCCAGGCAAAC  683

seq1  GCAATGGCCACCAGGCCGGGTAACCTGAGTTCCATCCTAGGACTTTCACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGCCACCAGGCCGGGTAACCTGAGTTCCATCCTAGGACTTTCACA  733

seq1  GTGGAAGGATAGGACCAACAAAGCATCCATCATCTGACTTCCATGCAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAAGGATAGGACCAACAAAGCATCCATCATCTGACTTCCATGCAAAT  783

seq1  GCCATGACCCAAGCAACTGTACTTTCCTCTCTTTCTCTCCTTATCCCCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGACCCAAGCAACTGTACTTTCCTCTCTTTCTCTCCTTATCCCCAG  833

seq1  AGAGAGAGACAGGATGAACAAACAAACAAACAAACAAACAAATGTATGTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGACAGGATGAACAAACAAACAAACAAACAAACAAATGTATGTA  883

seq1  TGTAATTAAAAAACTTAAACTACTAACATTAAAAAAGGAAAATGAGAAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTAAAAAACTTAAACTACTAACATTAAAAAAGGAAAATGAGAAGT  933

seq1  AGCTCTCTCTTCAATACAGCAGTTCAATTAATAATCAGGAAGATCATTAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTCTCTTCAATACAGCAGTTCAATTAATAATCAGGAAGATCATTAC  983

seq1  ATAAGGATGTTAAAATTCAAATGCTTAATTTCCTAAGAATTCAGAAAATG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGATGTTAAAATTCAAATGCTTAATTTCCTAAGAATTCAGAAAATG  1033

seq1  ATTATCCCCCAAAATAGAAAAGGAGGGATGGTGATAAGAAGGCTCTTTTA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCCCCCAAAATAGAAAAGGAGGGATGGTGATAAGAAGGCTCTTTTA  1083

seq1  GGGGACAGGGAGGAAAAGAAACATAGTTCACAGTGTCACATATATATCTT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACAGGGAGGAAAAGAAACATAGTTCACAGTGTCACATATATATCTT  1133

seq1  AACATTTTATCATGAATTC  1168
      |||||||||||||||||||
seq2  AACATTTTATCATGAATTC  1152

seq1: chr5_8368417_8369507
seq2: B6Ng01-061E03.g_78_1175

seq1  CCCCCAAGTTCTGCGAAGAGCCACAGGGTTGCTCACGAGCTACTACTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAAGTTCTGCGAAGAGCCACAGGGTTGCTCACGAGCTACTACTATT  50

seq1  TCTTGTGTTTCCAAGAGACCATGCCTTGAGTGCAGGACAAGTCAATTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTGTTTCCAAGAGACCATGCCTTGAGTGCAGGACAAGTCAATTTTG  100

seq1  CCACAGATCTGGACTGAGGGCCTACTGTGTGCTGGGCGTGAGTCACACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGATCTGGACTGAGGGCCTACTGTGTGCTGGGCGTGAGTCACACAT  150

seq1  TGTGAGGTGCAATTAAGAAAAGCCTTTTTGGTAAGAATTTTCCCAAGGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGGTGCAATTAAGAAAAGCCTTTTTGGTAAGAATTTTCCCAAGGCG  200

seq1  GTTTTCAATGCTTTTATTCCTATGAAGTATTTTGCTGACAGGTGTGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAATGCTTTTATTCCTATGAAGTATTTTGCTGACAGGTGTGTCTG  250

seq1  TGCACCTGCCATGTGTATGCAGTGTCTATGGTTGGAGGCCCAAAGAGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACCTGCCATGTGTATGCAGTGTCTATGGTTGGAGGCCCAAAGAGAAT  300

seq1  GTTGGGTCCCTAGGACTGGGGTTACAGAAGGTTTTGTGGGTTCTGGGAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGTCCCTAGGACTGGGGTTACAGAAGGTTTTGTGGGTTCTGGGAAT  350

seq1  CCAACTCATTTTCTCTGGAGGAACACTTAGTGTTTTAAACCTCTGAGACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACTCATTTTCTCTGGAGGAACACTTAGTGTTTTAAACCTCTGAGACA  400

seq1  TCTCTGTCCATTCTCCACGCCTTTTTTTGAATTGACATTTGATTTCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTCCATTCTCCACGCCTTTTTTTGAATTGACATTTGATTTCATTT  450

seq1  TAATTTTGATACCTAAGGGAGAGTGGTTAACCCAACTCCAGGAGAATCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTTGATACCTAAGGGAGAGTGGTTAACCCAACTCCAGGAGAATCAG  500

seq1  ATGTCTCCCAGAGGTCTAGGAAGACTTGTGAAGAGTGAGTCAGCCGGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTCCCAGAGGTCTAGGAAGACTTGTGAAGAGTGAGTCAGCCGGATA  550

seq1  CTCTGTGATATGTTTGCTTCCTCCTATATCTGTCAGCTTCAAACCTGCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGATATGTTTGCTTCCTCCTATATCTGTCAGCTTCAAACCTGCAC  600

seq1  CAGTAATAGATAAGGAAAACGACTTTGTCAGGCCGCTTTCCCTACCTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAATAGATAAGGAAAACGACTTTGTCAGGCCGCTTTCCCTACCTAGG  650

seq1  GAGTGGCACTATTCAAAAGTGTAGCCTTGTTGGAATAGGTGTACCGCTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCACTATTCAAAAGTGTAGCCTTGTTGGAATAGGTGTACCGCTGT  700

seq1  GGGTGTAGGCTTTAACCCCCTCCTCCTAGCTGCCTGGAAGCCAGTCTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGTAGGCTTTAACCCCCTCCTCCTAGCTGCCTGGAAGCCAGTCTTCT  750

seq1  CCTAGTAGCCTTCAGATGAAGTCATAGAACTCTCAGCTCCTTCAGCTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTAGCCTTCAGATGAAGTCATAGAACTCTCAGCTCCTTCAGCTCCT  800

seq1  CCTGCCATATGCCTGCCTCCACACTGCCATGCTCCCATCTTGATAATGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCATATGCCTGCCTCCACACTGCCATGCTCCCATCTTGATAATGGA  850

seq1  CTGAACCTCTGAACCTGTAAGCCAACTCCAAGCAAATATTGTCCTTATAA  900
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTGAACCTCTGAACCTGTAAGCCAACTCCAAGCAAATATTGTCCTTAT-A  899

seq1  GAGTTGCCTTGGTCATGGTGTCTGTTCACAGCAATAAAGCCCTAAATAAG  950
      ||||||||||||||||||||||||||||||||||||||| ||| ||||||
seq2  GAGTTGCCTTGGTCATGGTGTCTGTTCACAGCAATAAAG-CCTTAATAAG  948

seq1  ACACTGCCCCTCTCAAATGTTAGAGGCTCACCAGGATGAAATAATAATAA  1000
      ||||||||||||||||||| ||||||||||||||||||||||||||||| 
seq2  ACACTGCCCCTCTCAAATG-TAGAGGCTCACCAGGATGAAATAATAATAC  997

seq1  CACACATATTAACATAATTAGAACTTGAGCTTTATAGATTTTGAAATCTA  1050
      ||| |||||| |||||||||| ||||||||||||||||||||| ||||||
seq2  CAC-CATATT-ACATAATTAG-ACTTGAGCTTTATAGATTTTG-AATCTA  1043

seq1  TATATTGGCATTTGATCCCCAGAATAAA----------AGAGAGAGAGAG  1090
      | |||||||  ||||||||| |||||||          |||| |||||||
seq2  TTTATTGGCCATTGATCCCC-GAATAAAGGGGAGGGGTAGAGGGAGAGAG  1092

seq1  A-----  1091
      |     
seq2  AAGAGA  1098

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information