BAC Information

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BAC

Clone NameB6Ng01-061H07
Chromosome5 (Build37)
Map Location 59,707,918 - 59,709,044
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385, LOC100041396, LOC666499, EG625870
Downstream geneLOC100041425, LOC546866, Cbfa2t2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061H07.bB6Ng01-061H07.g
ACCDH882128DH882129
length1,121539
definitionDH882128|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H07, 5' end.DH882129|Mus musculus domesticus DNA, BAC clone: B6Ng01-061H07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccattcatatggtaatccttatgccacaaattttgttgtctactc
tatgatcagtgtctatggtgtattatagttaatataagtataaaaatggg
ttgaaaaataacaatgactttggtttatattgcctgttcacaatgataag
ctttgttttcttatcatacactattagatcagagtgccactggacagtaa
caatgaccaccacgcaagagtagcatatataatttgttcaaaaatattta
aattgtctgctatcactatgccttcatttttttattgtcacttagcaata
aggttcttcaaagaatactttgtccttggtctgaaatgctttaccaacta
ttcttcaaatgtataatagtatgagctaactattttgaggcatctttttc
aggataactaatgatcaccatttaactaagtctaccttaatgaaagaact
tactttccttctcactttcttcaatgtgttttccctcttctggttatttt
tcgaatgatatcccagaagaaacattctaggatttctatctatcatcaaa
ctgtccaatatttttgtcatttattttctttgtcacactgtcttgaatgt
ataaagttgaaagcttcatttttcaaatttaacatctttcaaaatgtttt
catcaagttctagtaatccaaaagtgtttcaggcaagctacggggtaaaa
attataaaaggatttttaaaaaagctttttaaagtttttaatagtcatat
gtatttctccttttatatattttctgctcagttctatagccaaatttttt
ttccattttttattaggtatttaactcatttacatttccaatgctatacc
aaaagtcccccatatccacccacccccactcccctgcccacccactcccc
ctttttggccctggtattcccctgtactggggcatataaagtttgcaagt
ccaatgggcctctctttccagtgatggccgactaggccatcttttgaata
tatgcagctagagtcagagcttcggttactggttagctcataatgttgtt
tcacctataaggatgcagatccctttagctcttgcttactttttctagct
acctcaatgggagccatgatc
aagaagaaggaagaccagagtgtggacagtttgccacttcttagaattgg
gaacaaaacacccatgcaaggagttacagagacagagtttggtgctgaga
ggaaaggatggaccatgtagacactgccatatctgggatccatcacataa
tcagcctccaaaccctgacaccattgcatacactagcaagattttgctga
aaggacccagatatagctgtctcttgtgagactatgctggagccctgcaa
acacagaagtggatgctcacagtcagctattggattgatcacaggccccc
aatggaggagctagagaatgtacccaaggggctaaaggggtctgcaaccc
tataggtggaacaacaatatgaactaaccattaccaccagaactcctgtc
ttcagcttcatatgtatcagaagatggcctagttggtcatctttggaaag
agaggcccattggtttttaaactttagatgcttcaatacaggggaacgcc
agggccaagaagtgggagtagtggggagaggagtgggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59707918_59709044
seq2: B6Ng01-061H07.b_48_1168 (reverse)

seq1  GATCATAGGGCTCCCAATGGAGTAGCTAGAAAAAGTAGCCAAGGAGCTAA  50
      ||||||  |||||||| ||  ||||||||||||||||  ||| |||||||
seq2  GATCAT--GGCTCCCATTGAGGTAGCTAGAAAAAGTAAGCAA-GAGCTAA  47

seq1  AGGGATCTGCAACCCTATAGGTGGAACAACATTATGAGCTAACCAGTACC  100
      ||||||||||| || |||||||| ||||||||||||||||||||||||  
seq2  AGGGATCTGCATCCTTATAGGTGAAACAACATTATGAGCTAACCAGTA-A  96

seq1  CCGGAGCTCTTGACTCTAGCTGCATATATATCAAAAGATGGCCTAGTCGG  150
      ||| ||||| ||||||||||||||||||| ||||||||||||||||||||
seq2  CCGAAGCTC-TGACTCTAGCTGCATATAT-TCAAAAGATGGCCTAGTCGG  144

seq1  CCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCACTGGAAAGAGAGGCCCATTGGACTTGCAAACTTTATATGCCCCA  194

seq1  GTACAGGGGAATACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGGGGAATACCAGGGCCAAAAAGGGGGAGTGGGTGGGCAGGGGAGT  244

seq1  GGGGGTGGGTGGATATGGGGGACTTTTGGTATAGCATTGGAAATGTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGGTGGATATGGGGGACTTTTGGTATAGCATTGGAAATGTAAAT  294

seq1  GAGTTAAATACCTAATAAAAAATGGAAAAAAAATTTGGCTATAGAACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAAATACCTAATAAAAAATGGAAAAAAAATTTGGCTATAGAACTGA  344

seq1  GCAGAAAATATATAAAAGGAGAAATACATATGACTATTAAAAACTTTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAATATATAAAAGGAGAAATACATATGACTATTAAAAACTTTAAA  394

seq1  AAGCTTTTTTAAAAATCCTTTTATAATTTTTACCCCGTAGCTTGCCTGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTTTTAAAAATCCTTTTATAATTTTTACCCCGTAGCTTGCCTGAA  444

seq1  ACACTTTTGGATTACTAGAACTTGATGAAAACATTTTGAAAGATGTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTTGGATTACTAGAACTTGATGAAAACATTTTGAAAGATGTTAAA  494

seq1  TTTGAAAAATGAAGCTTTCAACTTTATACATTCAAGACAGTGTGACAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAATGAAGCTTTCAACTTTATACATTCAAGACAGTGTGACAAAG  544

seq1  AAAATAAATGACAAAAATATTGGACAGTTTGATGATAGATAGAAATCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGACAAAAATATTGGACAGTTTGATGATAGATAGAAATCCTA  594

seq1  GAATGTTTCTTCTGGGATATCATTCGAAAAATAACCAGAAGAGGGAAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTTCTTCTGGGATATCATTCGAAAAATAACCAGAAGAGGGAAAAC  644

seq1  ACATTGAAGAAAGTGAGAAGGAAAGTAAGTTCTTTCATTAAGGTAGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAAGAAAGTGAGAAGGAAAGTAAGTTCTTTCATTAAGGTAGACTT  694

seq1  AGTTAAATGGTGATCATTAGTTATCCTGAAAAAGATGCCTCAAAATAGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAATGGTGATCATTAGTTATCCTGAAAAAGATGCCTCAAAATAGTT  744

seq1  AGCTCATACTATTATACATTTGAAGAATAGTTGGTAAAGCATTTCAGACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCATACTATTATACATTTGAAGAATAGTTGGTAAAGCATTTCAGACC  794

seq1  AAGGACAAAGTATTCTTTGAAGAACCTTATTGCTAAGTGACAATAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACAAAGTATTCTTTGAAGAACCTTATTGCTAAGTGACAATAAAAAA  844

seq1  ATGAAGGCATAGTGATAGCAGACAATTTAAATATTTTTGAACAAATTATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGGCATAGTGATAGCAGACAATTTAAATATTTTTGAACAAATTATA  894

seq1  TATGCTACTCTTGCGTGGTGGTCATTGTTACTGTCCAGTGGCACTCTGAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTACTCTTGCGTGGTGGTCATTGTTACTGTCCAGTGGCACTCTGAT  944

seq1  CTAATAGTGTATGATAAGAAAACAAAGCTTATCATTGTGAACAGGCAATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGTGTATGATAAGAAAACAAAGCTTATCATTGTGAACAGGCAATA  994

seq1  TAAACCAAAGTCATTGTTATTTTTCAACCCATTTTTATACTTATATTAAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAAAGTCATTGTTATTTTTCAACCCATTTTTATACTTATATTAAC  1044

seq1  TATAATACACCATAGACACTGATCATAGAGTAGACAACAAAATTTGTGGC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATACACCATAGACACTGATCATAGAGTAGACAACAAAATTTGTGGC  1094

seq1  ATAAGGATTACCATATGAATGGAATTC  1127
      |||||||||||||||||||||||||||
seq2  ATAAGGATTACCATATGAATGGAATTC  1121