BAC Information

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BAC

Clone NameB6Ng01-062L19
Chromosome5 (Build37)
Map Location 20,919,860 - 20,921,004
singlet/doubletsinglet
Overlap genenone
Upstream geneMagi2, LOC100041850, Phtf2, LOC622367, Tmem60, Rsbn1l, Ptpn12, EG626903, A530088I07Rik, Fgl2
Downstream geneAI847670, Fbxl13, LOC625004, LOC667253, Armc10, AB112350, Pmpcb, Dnajc2, Psmc2, Slc26a5, Reln, Dnaja1-ps
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062L19.bB6Ng01-062L19.g
ACCDH883041DH883042
length1,1271,233
definitionDH883041|Mus musculus domesticus DNA, BAC clone: B6Ng01-062L19, 5' end.DH883042|Mus musculus domesticus DNA, BAC clone: B6Ng01-062L19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttgcttgtcatctgaagggataaaagtcgtgatgtcttatt
gctgttcccaaattccctcatcagtgcattgatattcttaaatgcctgag
ctctaaactgtttccttctttaaggtaaggttctgggttcatatggtact
ctgagggggctgtgtgaaacttttctctcatcaccaactcagaaatttat
ttttatataatataattcatccaaatatttattcatttaaatttatttta
tttgcgtatttattttatttagatttgtgttatttaaatatttattttgt
ttaggtttgtgttagacttatttacttattttatttagacttaattactt
actttattttatttttcttgcttcttccaatgcaaaggtaggaaaattgg
gttggtaaactattcttctaactgggtaattgataagcctttgtcctcta
gaggaactagattgggtaagtgactctatgtggaggaagactaatttgaa
ggttgactttgggtgggtggagacaggaaatgcctacttaaccagaaagg
gagactgtgaacaacacagacatgggaggggcacctggcccacttcactt
gctgtgcatggtggctcttccctgacttggagttgactaaggactgtctt
gctcactttctctttcttcaatacccaatgtcctgcacaattctagccct
ttgttttagatcttatggtgtaatttgaagagcaaacctcccattgaagt
ttgctatgcattcacactaataccagattagagttctgggataaactcct
ggacaggaccaactcatagagcttgtgtgttattgaaatgttaacagagc
atcatatatgcaagacaaaagaactggccagtggtgtatgcacgttcatg
atggtggaggagtgtctgctgtgctctgggctgaggccactgctgtcaac
ccctttagcagctgatgggaaagatagaggtttcattattgtgcttagtt
cactcaggaagggaagaattgagattgaagtctaaactgaacttcaagta
agtttccatccttggggacctatttaagtggtggaacccaagcctgtgta
ggaaagaggagagaatgagagagggag
gaattccacataaaaccagagacactgaaacttatagaggagaaagtgag
gaaatccttgaagatatgagcacagggggaaaattcctgaacagaatagc
aatggcttgtgctataagatcaagaattgacaaatgggacctcataaaat
tgcaaagcttctgtaaggcaaaagacaccgtcaataagacaaaaaggcca
ccaacagattggaaaaggatctttaccaatcctaaatcagatatgggact
aatatccaatatatacaaagaactcaagaagatagactccagaaaatcaa
ataaacccatgaaaaaactggggcacagagctaaacaaagaattctcaac
taaggaataccgaatggctgagaagcacctgaaaaaatgttcaacatcct
taatcatcagggaaatgcaaatcaaaacaaccctgacattccacctcaca
ccagtcagaatggctaagatcaaaaattcaggtgacagcagatgctggcg
aggatgtggagaaacaggaacactcctccattgttggtgggattgctagc
ttgtacaaccactctagaaatcagtctggtggttcctcagaaaattggac
atagtactactggaggatcccgcaatacctctcctgggcatatatccaga
agatgttccaaccggtaataaggacccatgctctactatgttcatagcag
ccttatttataatagccagaagctggaaagaacccagatgtccctcaata
gaggaatggatacagaaaatatgtggtacatttacacaatggagtactac
tcagctattaaaaacaatgaatttatgaaattcttaggcaaatgaatgga
tctggaggacatcatcctgagtgaggtaacccaatcacaaaagaactcac
atgatatgcactcactgataagtgggtattagcctagaaacttagaatac
tcagatacaatttgcaaaacacatgaaactcagagacgagacagtgagga
tacttcattcctccttagatgtgcattttttaagtagtgatacatggtgt
gtgtgggttcagcctattttggtggtgccatccttgggctgtggtcttgg
ttctataaaagcagttgaaccaccatgagatcagcagtagcgacaccttc
tatagcctgctacgctctgacttaggtctctgcctgatttaggattccgt
tccgtttctctcgtagtttaaccagtactggtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_20919860_20921004
seq2: B6Ng01-062L19.b_46_1172 (reverse)

seq1  CTCCCTCTTCTTCCTCCTCCTCTTCTTCATTCTCCTCCTCTTCCTTACAC  50
                   ||||  |||    ||||||| |||||||| | |||||
seq2  -------------CTCCCTCTC----TCATTCT-CTCCTCTTTCCTACAC  32

seq1  AGCCTGGGGTT-CACCACTTTAAACTGGTCCCCAGGGATGGAAACTTACT  99
      || || ||||| |||||| |||||  |||||||| |||||||||||||||
seq2  AGGCTTGGGTTCCACCAC-TTAAATAGGTCCCCAAGGATGGAAACTTACT  81

seq1  TGAAGTTCAGTTTAGACTTCAATCTCAATTCTTCCCTTCCTGAGTGACCT  149
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGAAGTTCAGTTTAGACTTCAATCTCAATTCTTCCCTTCCTGAGTGAACT  131

seq1  AAGCACAATAATGAAACCTCTATCTGTCCCATCAGCTGCTAAAGGGGTTG  199
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AAGCACAATAATGAAACCTCTATCTTTCCCATCAGCTGCTAAAGGGGTTG  181

seq1  ACAGCAGTGGCCTCAGCCCAGAGCACAGCAGACACTCCTCCACCATCATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAGTGGCCTCAGCCCAGAGCACAGCAGACACTCCTCCACCATCATG  231

seq1  AACGTGCATACACCACTGGCCAGTTCTTTTGTCTTGCATATATGATGCTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGCATACACCACTGGCCAGTTCTTTTGTCTTGCATATATGATGCTC  281

seq1  TGTTAACATTTCAATAACACACAAGCTCTATGAGTTGGTCCTGTCCAGGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAACATTTCAATAACACACAAGCTCTATGAGTTGGTCCTGTCCAGGA  331

seq1  GTTTATCCCAGAACTCTAATCTGGTATTAGTGTGAATGCATAGCAAACTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCCCAGAACTCTAATCTGGTATTAGTGTGAATGCATAGCAAACTT  381

seq1  CAATGGGAGGTTTGCTCTTCAAATTACACCATAAGATCTAAAACAAAGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGAGGTTTGCTCTTCAAATTACACCATAAGATCTAAAACAAAGGG  431

seq1  CTAGAATTGTGCAGGACATTGGGTATTGAAGAAAGAGAAAGTGAGCAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAATTGTGCAGGACATTGGGTATTGAAGAAAGAGAAAGTGAGCAAGA  481

seq1  CAGTCCTTAGTCAACTCCAAGTCAGGGAAGAGCCACCATGCACAGCAAGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCTTAGTCAACTCCAAGTCAGGGAAGAGCCACCATGCACAGCAAGT  531

seq1  GAAGTGGGCCAGGTGCCCCTCCCATGTCTGTGTTGTTCACAGTCTCCCTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGGCCAGGTGCCCCTCCCATGTCTGTGTTGTTCACAGTCTCCCTT  581

seq1  TCTGGTTAAGTAGGCATTTCCTGTCTCCACCCACCCAAAGTCAACCTTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTTAAGTAGGCATTTCCTGTCTCCACCCACCCAAAGTCAACCTTCA  631

seq1  AATTAGTCTTCCTCCACATAGAGTCACTTACCCAATCTAGTTCCTCTAGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTCTTCCTCCACATAGAGTCACTTACCCAATCTAGTTCCTCTAGA  681

seq1  GGACAAAGGCTTATCAATTACCCAGTTAGAAGAATAGTTTACCAACCCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAAGGCTTATCAATTACCCAGTTAGAAGAATAGTTTACCAACCCAA  731

seq1  TTTTCCTACCTTTGCATTGGAAGAAGCAAGAAAAATAAAATAAAGTAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTACCTTTGCATTGGAAGAAGCAAGAAAAATAAAATAAAGTAAGT  781

seq1  AATTAAGTCTAAATAAAATAAGTAAATAAGTCTAACACAAACCTAAACAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAGTCTAAATAAAATAAGTAAATAAGTCTAACACAAACCTAAACAA  831

seq1  AATAAATATTTAAATAACACAAATCTAAATAAAATAAATACGCAAATAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATATTTAAATAACACAAATCTAAATAAAATAAATACGCAAATAAA  881

seq1  ATAAATTTAAATGAATAAATATTTGGATGAATTATATTATATAAAAATAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTAAATGAATAAATATTTGGATGAATTATATTATATAAAAATAA  931

seq1  ATTTCTGAGTTGGTGATGAGAGAAAAGTTTCACACAGCCCCCTCAGAGTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTGAGTTGGTGATGAGAGAAAAGTTTCACACAGCCCCCTCAGAGTA  981

seq1  CCATATGAACCCAGAACCTTACCTTAAAGAAGGAAACAGTTTAGAGCTCA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATGAACCCAGAACCTTACCTTAAAGAAGGAAACAGTTTAGAGCTCA  1031

seq1  GGCATTTAAGAATATCAATGCACTGATGAGGGAATTTGGGAACAGCAATA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATTTAAGAATATCAATGCACTGATGAGGGAATTTGGGAACAGCAATA  1081

seq1  AGACATCACGACTTTTATCCCTTCAGATGACAAGCAAAGAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCACGACTTTTATCCCTTCAGATGACAAGCAAAGAGAATTC  1127