MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-063H16
Chromosome	5 (Build37)
Map Location	40,489,252 - 40,490,379
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC384174, Hs3st1, EG665839
Downstream gene	LOC100040502
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC384174 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:384174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 9 Proteins pseudo : _no_value

name	Hs3st1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15476 MGI:1201606
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665839 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665839 MGI:3646286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 559 ESTs, 21 Proteins

name	LOC100040502 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 5 Proteins

name	Hs3st1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754245 GeneID:15476 MGI:1201606
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : heparan sulfate (glucosamine) 3-O-sulfotransferase 1 transcript_id : NM_010474.1

name	EG665839 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94374715 GeneID:665839 MGI:3646286
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 559 ESTs, 21 Proteins product : predicted gene, EG665839 transcript_id : XM_979793.1

name	LOC100040502 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253863 GeneID:100040502
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 42 ESTs, 5 Proteins product : similar to CBF1 interacting corepressor transcript_id : XM_001474823.1

name	Hs3st1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754246 CCDS:CCDS19257.1 GeneID:15476 MGI:1201606
definition	GO_function : GO:0008467 - heparin-glucosamine 3-O-sulfotransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 function : rate limiting enzyme for the synthesis of anticoagulant heparan sulfate product : heparan sulfate (glucosamine) 3-O-sulfotransferase 1 protein_id : NP_034604.1

name	EG665839 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94374716 GeneID:665839 MGI:3646286
definition	codon_start : 1 product : similar to DnaJ-like protein protein_id : XP_984887.1

name	LOC100040502 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253864 GeneID:100040502
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474873.1

name	LOC384174 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:384174
definition	number : 1 pseudo : _no_value

clone name	MSMg01-494C11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-045H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-452C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-393C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318N12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-047D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-201F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-465D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-168K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-541L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298F21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-331M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-367K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-376F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-057H23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-119P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306K13
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-183E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-541F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-184F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-429F23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-289G20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075O24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-080E11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394F04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-516D16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-442E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-469P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527G08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098H20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069C16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-512M04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-125J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-361F23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349H22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-094E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-534J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081J21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426N09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-443P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-479B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-539B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143B01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139M02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-236M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467B17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-401H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-497A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-109C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-434B22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191K07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536G14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-427G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-418M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-300P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-095A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-091D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066O02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-351L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-118C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-498K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-317P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-384E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461E18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-061F20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539C09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-521I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339N17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-396J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-489F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331G19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-297M17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087N18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-188H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243P07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-345L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-003K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-250A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185B17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-104J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120P16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040E02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229A05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-173H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299H13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-097I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204G16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-154B04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-004P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114I11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211K02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177G05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-096P06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-239L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091N19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094F12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-071O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255C10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-144N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-343C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-342D22
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-063H16.b	B6Ng01-063H16.g
ACC	DH883560	DH883561
length	1,108	1,223
definition	DH883560\|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H16, 5' end.	DH883561\|Mus musculus domesticus DNA, BAC clone: B6Ng01-063H16, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattctttaaagtggagtgatattgtcagtagaaataaagaatgtgaat atttaatttaatacagaaagattgaaaatccattgcttctagtatagaag gaatccatgacctaaaattattatattatgtatgaaaaggatacactcag tcatataatatgaattattagttttctattacatatcaagaagaaataag gtttaaactcaattagaggacaaagtgaacaaagtctcaacaacaaagtg ttgcagacagaagtcagtattatgcataaaacaaaacagggttgttggct gggagtctttgcaagtggttctcatattcccttcattaacatccctagag aagtcgtttctcgattagttacatggaaactttggtcttacacaggagaa gacctgcctcttaagtcattatctcatagacagtgtttcaagcagagtaa cagcagtaagagagccaccctcagaacagacagggaacagaaatccatgt aagactgtaggattctccaatttcaatatctaacctcaaatcctaagcac agctggatagcctgttctctaataacaacaagactatgaactatttaaga taagggcagtggaaatgtggatttaactttgtctccctcaagagaatgaa taggtaatgacaagaatccacccaaggagttttctaacaaagtaaacaac actgacatcccatacaacttgtatcaataaagattaaaatattttttgta tccattcctctgttgaggggcatctgggttctttccagcttctggctatt ataaataaggctgctatgaacatagtggagcatgtgtccttcttaccggt tgggacatcttctggatatatgcccaggagaggtattgcaggatcctctg gtagtactttgtccaattttctgaggaactgcagactgatttccagagtg gtgtacagcttgcatccatcaacaatggagagtgttctatttctccacat ctcgcagcatctgctgtcacctgaatacacatggagtactactcagctat taaaagaatgattatgaaattctaggcatggatgaactgaggcatcattc tgatgagt	gaattcatgaagaagatgtgatacatttgtatgtgatacaaccgagattt actcagctgttcaaaaaaatgtgaggacatgaaatttacaggcaagtgga tgtgactagggaaaaaaattctgaatgaggtaactcactcacagaaagaa aaatatatgtgaatgggatacttctagtagggatgcactgatcattcttg gtatgagaaataaattttatgggcagaatgaggatggatccaggaggggg aaccaagaggagaaatgagttggagtgagagactgaggaaagaaaagaag tggaactaggcaggcatttggggagtggtgtggaaactgagtgtgttgaa aatgtttttttttaatctatgaatgtgatgtgaattaggattcctagtaa agggggatacaaagtctcaactgtccatctcttatagcaaggctagcatt ccactggtaggagtaggtgactttcaattaagttttgggccaagggagtt tatggaaatccctaaacaataaaggcttttgctaagacaaaggcttctgt ccatagacctacagcagggccccattgcttggactgccacttgcatgaca ccctgaacttggagtaatgaaactgctatctacatgaaaaccttaccctt atgttctagcttcttggtacaggaaaggactctgcatgataatggaagaa aaatgagggcacaaaccattgtcatacaatctgtcctacctgcaaaattt gctagggcaacagtgccatgtgagagtaagcaaccaatatcagtgtataa tgtgacctaaggactgctccactagaagcaatccacacctggtattgttt gagtaaccaataaccagagttcagctagcaaaacacttagaataaaacag aacactactaatcttaaacttaaaatataataaaatgatcctatgatatt ttctattgcatagatcagtgcttatgagcatcatcagagagatatccttg gcagcgatggaacgatccaagactgacggcggctttgcaaagaaatctaa tggaggtgttcttcaatcgcaactcttgaggagcaacatatttaggacga ggaggaatatacaggacagcttgatcacagcaggaatgactcagacgaac actgcagtccattggcaccacacaggtccctccgacagtactgcgtatac tagcaatatgagacctcgacgat
quality values	Open. Hide. 33 47 18 23 57 53 47 57 31 32 61 32 31 30 61 42 61 47 37 61 32 29 43 43 61 43 32 32 22 15 19 22 21 31 37 27 43 61 61 61 61 61 55 43 43 38 61 61 61 61 61 49 61 61 61 61 61 61 61 55 61 61 61 61 49 61 61 61 61 61 61 49 61 61 61 55 61 55 61 61 49 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 52 61 33 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 57 57 53 57 57 57 53 57 57 53 57 57 57 53 53 57 57 57 57 57 57 53 57 53 47 53 47 47 53 57 53 53 57 53 53 47 53 57 52 53 53 57 57 57 53 52 57 53 57 57 32 47 53 47 50 53 57 53 53 57 53 57 45 57 57 50 53 53 57 53 21 53 53 50 47 47 43 53 53 57 57 41 33 57 57 53 53 53 53 53 57 57 57 53 53 38 41 57 53 50 57 53 53 53 45 53 52 53 45 53 53 53 52 57 38 52 53 53 52 46 53 57 52 52 45 53 53 52 37 52 53 45 43 43 34 25 41 30 53 53 53 39 53 50 42 53 41 47 50 50 50 36 57 34 34 57 32 52 25 39 53 33 57 47 33 53 50 42 57 37 53 57 53 33 57 30 53 53 42 38 57 53 30 53 50 53 57 44 46 37 53 57 41 34 33 40 42 34 34 30 57 30 53 33 33 52 30 46 40 47 28 37 27 40 33 34 40 36 40 19 37 35 51 40 35 29 52 24 34 38 21 16 40 52 43 48 33 24 57 57 37 41 37 32 30 35 33 53 43 37 33 30 53 44 32 30 40 44 33 30 33 45 35 36 24 40 24 53 31 25 40 33 33 29 32 37 32 38 47 30 30 32 30 25 29 44 30 51 48 28 39 23 30 30 51 51 36 34 32 32 51 51 51 51 31 30 24 19 31 22 30 22 34 29 30 30 34 32 24 45 22 27 29 41 31 51 45 37 18 27 35 28 29 34 45 29 28 30 29 29 46 31 24 23 25 23 29 37 39 29 33 43 29 23 29 26 25 30 23 33 25 51 29 35 27 23 19 31 15 33 29 28 25 28 28 27 31 35 29 15 29 27 26 24 25 30 29 14 29 28 31 35 13 29 29 21 31 28 36 31 30 29 21 29 17 17 26 25 19 29 51 23 28 14 22 34 29 29 35 31 22 27 23 24 12 10 16 18 23 28 14 24 29 22 15 17 29 9 28 9 43 19 8 5 11 8 10 18 13 14 28 20 31 26 25 22 19 21 33 20 28 20 20 14 16 10 5 7 10 13 12 20 16 22 28 51 51 23 22 28 16 27 10 33 20 30 31 17 21 27 14 9 36 19 18 18 18 22 38 28 15 28 19 9 9 6 6 24 13 7 13 23 14 9 32 10 22 20 23 26 7 16 19 19 14 7 4 15 9 9 15 12 17 13 9 25 20 17 6 6 12 28 9 13 28 14 17 13 33 17 10 5 7 16 8 15 10 23 35 12 14 10 23 14 31 31 9 25 19 17 19 17 15 21 16 15 10 9 19 12 19 21 8 14 7 18 7 5 8 5 29 8 7 5 6 12 4 5 8 22 11 17 17 5 9 11 10 15 7 4 36 34 20 9 13 27 12 25 17 10 9 9 9 10 14 26 10 19 7 23 8 16 17 22 5 7 4 11 12 7 5 27 4 8 9 11 7 4 6 25 6 9 16 11 8 6 9 25 9 12 7 8 5 6 5 17	Open. Hide. 61 47 35 38 61 47 43 35 43 37 23 16 31 19 21 41 22 47 38 61 47 47 55 61 52 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 61 61 61 61 61 61 49 55 61 61 61 61 61 61 49 59 59 61 61 61 61 61 43 61 61 61 61 61 61 59 61 61 61 61 59 61 59 59 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 55 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 52 55 55 55 61 61 61 61 61 61 61 49 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 61 61 61 61 61 55 61 52 61 61 61 61 61 61 55 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 55 61 61 61 61 61 61 61 50 61 55 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 53 61 61 61 61 61 61 61 61 61 53 61 61 53 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 50 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 43 61 61 61 53 61 61 61 61 61 61 61 37 42 61 61 39 34 61 61 45 61 61 61 61 61 61 53 47 47 61 61 61 52 53 61 39 61 53 57 57 57 57 53 53 53 53 53 53 43 57 57 53 57 53 53 53 53 53 53 47 47 42 47 53 53 57 50 53 47 53 53 45 57 53 37 57 45 53 53 46 53 53 53 52 38 53 57 53 43 57 53 57 57 57 53 53 53 53 39 47 38 50 47 47 47 53 42 53 57 50 53 47 57 57 53 57 45 53 52 47 33 41 45 47 47 52 36 47 50 53 53 53 53 52 30 53 53 47 44 47 52 38 23 57 39 57 45 38 35 52 37 41 37 57 47 41 53 53 50 45 46 26 53 50 41 52 50 46 52 43 50 36 45 53 50 32 57 53 45 53 46 47 32 53 53 53 40 53 42 57 39 50 38 50 53 47 22 12 47 53 53 53 39 36 52 39 47 37 35 52 46 52 50 47 40 38 33 50 52 37 35 44 30 38 23 47 34 39 50 57 40 38 30 50 34 47 37 52 41 36 40 40 35 53 37 40 53 53 36 39 41 37 37 38 37 41 32 41 47 30 31 36 38 36 40 31 30 32 41 40 48 40 48 33 53 23 24 27 37 29 13 53 40 57 25 18 10 23 21 38 36 40 34 36 20 37 41 37 24 40 32 38 57 32 30 32 25 33 53 57 53 22 29 29 37 40 57 40 32 31 32 16 57 12 16 13 10 11 19 36 30 30 24 28 25 39 20 27 29 30 29 25 28 25 30 27 17 11 25 29 30 29 14 51 51 31 22 46 33 31 23 28 25 26 48 30 24 17 25 29 25 29 28 35 26 30 14 28 29 28 29 29 20 36 16 26 14 29 24 34 21 19 34 17 6 14 26 21 29 28 28 30 26 39 22 28 28 22 23 11 7 5 29 23 19 30 28 14 25 24 25 15 23 29 34 31 25 25 41 12 24 25 28 11 36 18 13 29 9 25 35 43 8 4 10 19 17 18 15 19 26 23 27 24 16 29 15 51 19 28 29 29 29 24 24 15 29 9 12 23 15 29 23 26 18 16 27 13 26 26 15 18 16 22 28 23 20 19 14 38 41 8 15 9 18 20 20 16 14 29 17 13 19 46 46 16 7 7 15 43 22 23 6 23 28 8 14 26 21 11 23 16 5 5 7 44 28 33 23 16 14 44 51 38 16 15 10 8 19 11 15 38 38 20 16 29 15 31 10 25 14 26 10 28 31 15 6 12 26 51 28 22 9 14 6 8 15 16 23 23 18 7 21 28 28 20 11 9 26 10 23 9 24 9 20 12 14 8 17 22 29 17 15 28 6 5 22 7 5 5 7 6 5 9 12 11 22 30 9 28 12 6 9 8 5 18 13 19 7 22 5 7 12 13 12 8 11 12 8 6 11 21 26 29 6 3 3 16 6 7 15 7 10 5 7 4 3 4 6 11 7 10 9 10 17 9 6 6 13 4 7 7 13 11 16 6 12 7 21 7 4 5 5 19 10 16 27 4 5 4 22 5 5 6 5 22 4 7 6 14 16 10 5 10 10 8 5 9 6 8 4 3 11 5 4 7 4 3 3 14 8 7 3 3 4 4 6 14 4 6 6 18 5 6 18 6 18 6 5 3 3 7 8 5 10 6 5 9 6 10 13 5 6 1 1 5 6 3 5 11 16 6 3 9 3 3 3 6 7 4 2 2 4 3 3 4 5 7 12 3 1 4 5 9 4 4 5 6 4 10 4 8 13 5 4 7 10 9 4 11 7 4 9 7 3 3 6 3 6 1 3 5 3 3 3 2 3 4 3 5 3 3 3 6 4 16 9 7 8 4 7 3 4 5 5 10 5 3 8 4 5 14

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_40489252_40490379
seq2: B6Ng01-063H16.b_48_1155

seq1  GAATTCTTTAAAGTGGAGTGATATTGTCAGTAGAAATAAAGAATGTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGTGGAGTGATATTGTCAGTAGAAATAAAGAATGTGAAT  50

seq1  ATTTAATTTAATACAGAAAGATTGAAAATCCATTGCTTCTAGTATAGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAATTTAATACAGAAAGATTGAAAATCCATTGCTTCTAGTATAGAAG  100

seq1  GAATCCATGACCTAAAATTATTATATTATGTATGAAAAGGATACACTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCATGACCTAAAATTATTATATTATGTATGAAAAGGATACACTCAG  150

seq1  TCATATAATATGAATTATTAGTTTTCTATTACATATCAAGAAGAAATAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAATATGAATTATTAGTTTTCTATTACATATCAAGAAGAAATAAG  200

seq1  GTTTAAACTCAATTAGAGGACAAAGTGAACAAAGTCTCAACAACAAAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAACTCAATTAGAGGACAAAGTGAACAAAGTCTCAACAACAAAGTG  250

seq1  TTGCAGACAGAAGTCAGTATTATGCATAAAACAAAACAGGGTTGTTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGACAGAAGTCAGTATTATGCATAAAACAAAACAGGGTTGTTGGCT  300

seq1  GGGAGTCTTTGCAAGTGGTTCTCATATTCCCTTCATTAACATCCCTAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCTTTGCAAGTGGTTCTCATATTCCCTTCATTAACATCCCTAGAG  350

seq1  AAGTCGTTTCTCGATTAGTTACATGGAAACTTTGGTCTTACACAGGAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCGTTTCTCGATTAGTTACATGGAAACTTTGGTCTTACACAGGAGAA  400

seq1  GACCTGCCTCTTAAGTCATTATCTCATAGACAGTGTTTCAAGCAGAGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGCCTCTTAAGTCATTATCTCATAGACAGTGTTTCAAGCAGAGTAA  450

seq1  CAGCAGTAAGAGAGCCACCCTCAGAACAGACAGGGAACAGAAATCCATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGTAAGAGAGCCACCCTCAGAACAGACAGGGAACAGAAATCCATGT  500

seq1  AAGACTGTAGGATTCTCCAATTTCAATATCTAACCTCAAATCCTAAGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGTAGGATTCTCCAATTTCAATATCTAACCTCAAATCCTAAGCAC  550

seq1  AGCTGGATAGCCTGTTCTCTAATAACAACAAGACTATGAACTATTTAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGATAGCCTGTTCTCTAATAACAACAAGACTATGAACTATTTAAGA  600

seq1  TAAGGGCAGTGGAAATGTGGATTTAACTTTGTCTCCCTCAAGAGAATGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGCAGTGGAAATGTGGATTTAACTTTGTCTCCCTCAAGAGAATGAA  650

seq1  TAGGTAATGACAAGAATCCACCCAAGGAGTTTTCTAACAAAGTAAACAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAATGACAAGAATCCACCCAAGGAGTTTTCTAACAAAGTAAACAAC  700

seq1  ACTGACATCCCATACAACTTGTATCAATAAAGATTAAAATATTTTTTGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGACATCCCATACAACTTGTATCAATAAAGATTAAAATATTTTTTGTA  750

seq1  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTCCTCTGTTGAGGGGCATCTGGGTTCTTTCCAGCTTCTGGCTATT  800

seq1  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTCTTACCGGT  850

seq1  TGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCAGGATCCTCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATCTTCTGGATATATGCCCAGGAGAGGTATTGCAGGATCCTCTG  900

seq1  GTAGTACTATGTCCAATTTTCTGAGGAACTGCCAGACTGATTTCCAGAGT  950
      |||||||| |||||||||||||||||||||| ||||||||||||||||||
seq2  GTAGTACTTTGTCCAATTTTCTGAGGAACTG-CAGACTGATTTCCAGAGT  949

seq1  GGTTGTACAAGCTTGCAATCCCACCAACAATGGAGGAGTGTTCCTATTTC  1000
      || ||||| ||||||||   ||| |||||||||| ||||||| |||||||
seq2  GG-TGTAC-AGCTTGCA--TCCATCAACAATGGA-GAGTGTT-CTATTTC  993

seq1  TCCACATCCTCGCCAGCATCTGCTGTCACCTGAATACACAATGGAGTACT  1050
      ||||||| |||| |||||||||||||||||||||||||| ||||||||||
seq2  TCCACAT-CTCG-CAGCATCTGCTGTCACCTGAATACAC-ATGGAGTACT  1040

seq1  ACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGGCAAATGGATG  1100
      ||||||||||| ||||||||||  |||||||||| ||||||  |||||| 
seq2  ACTCAGCTATT-AAAAGAATGA--TTATGAAATT-CTAGGC--ATGGAT-  1083

seq1  GACCTGGAGGGCATCATCCTGAGTGAGT  1128
      || |||   |||||||| |||| |||||
seq2  GAACTG--AGGCATCATTCTGA-TGAGT  1108

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information