BAC Information

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BAC

Clone NameB6Ng01-064H10
Chromosome5 (Build37)
Map Location 7,874,757 - 7,976,110
singlet/doubletdoublet
Overlap geneEG546855, Steap4
Upstream geneLOC100042651, 4921511H03Rik, LOC242823, LOC667767
Downstream geneSri, LOC433840, Adam22, Dbf4, Slc25a40, Gm440, Abcb1a, EG330031, Abcb1b, Abcb4, Crot
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064H10.bB6Ng01-064H10.g
ACCDH884243DH884244
length1,0441,072
definitionDH884243|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H10, 5' end.DH884244|Mus musculus domesticus DNA, BAC clone: B6Ng01-064H10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,874,757 - 7,875,810)(7,975,017 - 7,976,110)
sequence
gaattcattcttctccttccactgtctgggtcacaagatatagaatctaa
attgtcaaatctagaagcatgtgctcttactgattgagccatctcactgt
ctcagacagttagcacctgaactggtagccttaataaaatagatgcccta
cccaatgtgggtagatcaagtagaataagaaggtaactgtacccggactg
acttccatacagctggagttaggacacaagcctcctaccctctgcattcc
tagttctcaggctgagttctgggagcagaatctagaccagattctttggc
ccttgcgtattggcttacattgttacctttcctgggtcttgtgtgtatgt
gagattcctcaacttcttttgtttttcttttatttacatttcagatgtta
tcccctttcctagtttcccctccaaaaattgcttatcccttccctcgtcc
ccctgctcaccaacccacccacttctgcttcctagccctggcattcccct
atactggggaatagaaccttgacagaaccaaggtcctcttctcgaattga
tgaccaactaggccatcctcagttacatatgcatctggagccacaagttc
caccacgtgttttctttggttggtgatttagtcccagggagctctggggg
tactggttagttcatattgttgttcctcctatagggttgcaaaccccttc
agctccttgggtgctttctctagctcctccattggggactctgtgctcca
tccaatagatggctgtgagcatccacttctgtgtttgtaggcagaggcag
agtctctcgggagacagctatatcagactcctgtcagcaagcttttattg
gcatccacactagtttctggttttggtggttgtttatgggatggatctcc
agtgggcagtctctggatgggtcattccttcagtctctgctccacacttt
gtctctgtactccttccatgggtgttcgttcctcctctatgagattgaat
tgattcttcaacttcttatcgcatcttctcaactgccatactct
gaattccagattcagatatgattcggtcccatcaaactactaatacacat
gaaccacaatagactacgcttctcaacgaaccccaagaaagttgtcctta
gcacaatgagataaatgaaatatttaatagggattttaaaagagttgcat
tcaggtatggacatattaaaacattcacctttaaacgactgaattcaagt
tcatttaatcttacctgccggcttgcatctagtgttcctgactggagagc
ccaggctgagatggtgttaaatgctttgaccacgtgggctcctggctcca
gctgagcaaggtattccgcatttgactctggatactgattgattttgcgg
ttgttactgacgtctaccaatacttttcctttgagataatcaactagttc
cgtgagggaatcatagtgctctctgtgcatggctaggattatgatgtcag
acttggatgctgcttccgaatagctcaggacctctgcccccctgggcaga
aggctggacacctgggggtttcgactcccaaaaacgatagaatagccaca
ctgaagcattttcaatcccagtgacttcccgaaatctcctgttccgaaaa
tgcagacaaccccttgcttttctgaggaatcagtagtcagaggaaactca
tctgcatgtgctttctccattactgaaaagcaagcaaacaaaatacggat
catcagcatgtaactgagataccccaagacattcagaggaaaaggtgcca
tgcttacaaaaacaattgaatatcatgcctgggaatccagccacaattgg
tattcagaagctcatatttttgtacaagttcgcacagtaatctatctcac
tctctcgtcttgtgggggatatatgtcttctttcaggatacattttctca
agtctacatgaaccgtcagctatgtagagtttttttttttttttcctctt
gggtagggacgggattttatgattattttcatgctgaaatgcctgtctac
aaggctagacagttgcaattttgtaagtatgagcaggatggaatgggagt
gcgaaggatcggtcctccccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_7874757_7875810
seq2: B6Ng01-064H10.b_45_1088

seq1  GAATTCATTCTTCTCCTTCCACTGTCTGGGTCACAAGATATAGAATCTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTTCTCCTTCCACTGTCTGGGTCACAAGATATAGAATCTAA  50

seq1  ATTGTCAAATCTAGAAGCATGTGCTCTTACTGATTGAGCCATCTCACTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCAAATCTAGAAGCATGTGCTCTTACTGATTGAGCCATCTCACTGT  100

seq1  CTCAGACAGTTAGCACCTGAACTGGTAGCCTTAATAAAATAGATGCCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACAGTTAGCACCTGAACTGGTAGCCTTAATAAAATAGATGCCCTA  150

seq1  CCCAATGTGGGTAGATCAAGTAGAATAAGAAGGTAACTGTACCCGGACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATGTGGGTAGATCAAGTAGAATAAGAAGGTAACTGTACCCGGACTG  200

seq1  ACTTCCATACAGCTGGAGTTAGGACACAAGCCTCCTACCCTCTGCATTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCATACAGCTGGAGTTAGGACACAAGCCTCCTACCCTCTGCATTCC  250

seq1  TAGTTCTCAGGCTGAGTTCTGGGAGCAGAATCTAGACCAGATTCTTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTCAGGCTGAGTTCTGGGAGCAGAATCTAGACCAGATTCTTTGGC  300

seq1  CCTTGCGTATTGGCTTACATTGTTACCTTTCCTGGGTCTTGTGTGTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCGTATTGGCTTACATTGTTACCTTTCCTGGGTCTTGTGTGTATGT  350

seq1  GAGATTCCTCAACTTCTTTTGTTTTTCTTTTATTTACATTTCAGATGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTCCTCAACTTCTTTTGTTTTTCTTTTATTTACATTTCAGATGTTA  400

seq1  TCCCCTTTCCTAGTTTCCCCTCCAAAAATTGCTTATCCCTTCCCTCGTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTCCTAGTTTCCCCTCCAAAAATTGCTTATCCCTTCCCTCGTCC  450

seq1  CCCTGCTCACCAACCCACCCACTTCTGCTTCCTAGCCCTGGCATTCCCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCTCACCAACCCACCCACTTCTGCTTCCTAGCCCTGGCATTCCCCT  500

seq1  ATACTGGGGAATAGAACCTTGACAGAACCAAGGTCCTCTTCTCGAATTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGGGGAATAGAACCTTGACAGAACCAAGGTCCTCTTCTCGAATTGA  550

seq1  TGACCAACTAGGCCATCCTCAGTTACATATGCATCTGGAGCCACAAGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCAACTAGGCCATCCTCAGTTACATATGCATCTGGAGCCACAAGTTC  600

seq1  CACCACGTGTTTTCTTTGGTTGGTGATTTAGTCCCAGGGAGCTCTGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACGTGTTTTCTTTGGTTGGTGATTTAGTCCCAGGGAGCTCTGGGGG  650

seq1  TACTGGTTAGTTCATATTGTTGTTCCTCCTATAGGGTTGCAAACCCCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGTTAGTTCATATTGTTGTTCCTCCTATAGGGTTGCAAACCCCTTC  700

seq1  AGCTCCTTGGGTGCTTTCTCTAGCTCCTCCATTGGGGACTCTGTGCTCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTGGGTGCTTTCTCTAGCTCCTCCATTGGGGACTCTGTGCTCCA  750

seq1  TCCAATAGATGGCTGTGAGCATCCACTTCTGTGTTTGTTAGGCAGAGGCA  800
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCCAATAGATGGCTGTGAGCATCCACTTCTGTGTTTG-TAGGCAGAGGCA  799

seq1  GAGTCTCTCGGGAGACAGCTATATCAGACTCCTGTCAGCAAGCTTTTATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTCTCGGGAGACAGCTATATCAGACTCCTGTCAGCAAGCTTTTATT  849

seq1  GGCATCCACACTAGTGTCTGGTTTTGGTGGTTGTTTATGGGATGGATCTC  900
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GGCATCCACACTAGTTTCTGGTTTTGGTGGTTGTTTATGGGATGGATCTC  899

seq1  CAGGTGGGGCAGTCTCTGGAT-GGTCATTCCTTCAGTCTCTGCTCCACAC  949
      |||   ||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAG--TGGGCAGTCTCTGGATGGGTCATTCCTTCAGTCTCTGCTCCACAC  947

seq1  TTTGTCTCTGTAACTCCTTCCATGGGTGTTTCGTTCCTCCTTCTAAGGAG  999
      ||||||||||| |||||||||||||||| ||||||||||| |||| |   
seq2  TTTGTCTCTGT-ACTCCTTCCATGGGTG-TTCGTTCCTCC-TCTATG--A  992

seq1  GATTGAAGTGATTCTTCAACTTCTTAATCGCCATCATCTCAACAGCCAAT  1049
      ||||||| ||||||||||||||||| |||| |||| ||||||| ||| ||
seq2  GATTGAATTGATTCTTCAACTTCTT-ATCG-CATCTTCTCAACTGCC-AT  1039

seq1  ACTCT  1054
      |||||
seq2  ACTCT  1044

seq1: chr5_7975017_7976110
seq2: B6Ng01-064H10.g_71_1142 (reverse)

seq1  AGGGGGAGGACCCTGATCCTTCTGCCACTCCCATTCCATCCTGCTCATAC  50
      ||||||||||||  ||||||||   |||||||||||||||||||||||||
seq2  AGGGGGAGGACC--GATCCTTC--GCACTCCCATTCCATCCTGCTCATAC  46

seq1  TTAACAAATATTTGCCAACTGTCTAGCCCTTGGTAGACAGTGCATTTCTC  100
      |||  |||   ||| |||||||||||||  | |||||||| |||||  ||
seq2  TTACAAAA---TTG-CAACTGTCTAGCC--TTGTAGACAG-GCATT--TC  87

seq1  AGCATGGAAAAATAAATCATTAAAATTCCCGTCCCTACCCAAGAGGAAAA  150
      ||||||  ||||| ||||||  ||| |||||||||||||||||||| |||
seq2  AGCATG--AAAAT-AATCAT--AAAATCCCGTCCCTACCCAAGAGG-AAA  131

seq1  AAAAAAAAAAAACTCTACATTAGCTGACGGTTTCATGTAGAACTTGAGAA  200
      ||||||||||||||||||| |||||||||| ||||||||| |||||||||
seq2  AAAAAAAAAAAACTCTACA-TAGCTGACGG-TTCATGTAG-ACTTGAGAA  178

seq1  AATGTATCCTGAAAGAAGACATATTATCCCCCACAAGACGAGAGAGTGAG  250
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AATGTATCCTGAAAGAAGACATA-TATCCCCCACAAGACGAGAGAGTGAG  227

seq1  ATAGATTACTGTGCGAACTTGTAC-AAAATATGAGCTTCTGAATACCAAT  299
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATAGATTACTGTGCGAACTTGTACAAAAATATGAGCTTCTGAATACCAAT  277

seq1  TGTGGCTGGATTCCCAGGCATGATATTCAATTGTTTTTGTAAGCATGGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCTGGATTCCCAGGCATGATATTCAATTGTTTTTGTAAGCATGGCA  327

seq1  CCTTTTCCTCTGAATGTCTTGGGGTATCTCAGTTACATGCTGATGATCCG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCTCTGAATGTCTTGGGGTATCTCAGTTACATGCTGATGATCCG  377

seq1  TATTTTGTTTGCTTGCTTTTCAGTAATGGAGAAAGCACATGCAGATGAGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGTTTGCTTGCTTTTCAGTAATGGAGAAAGCACATGCAGATGAGT  427

seq1  TTCCTCTGACTACTGATTCCTCAGAAAAGCAAGGGGTTGTCTGCATTTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTGACTACTGATTCCTCAGAAAAGCAAGGGGTTGTCTGCATTTTC  477

seq1  GGAACAGGAGATTTCGGGAAGTCACTGGGATTGAAAATGCTTCAGTGTGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGAGATTTCGGGAAGTCACTGGGATTGAAAATGCTTCAGTGTGG  527

seq1  CTATTCTATCGTTTTTGGGAGTCGAAACCCCCAGGTGTCCAGCCTTCTGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCTATCGTTTTTGGGAGTCGAAACCCCCAGGTGTCCAGCCTTCTGC  577

seq1  CCAGGGGGGCAGAGGTCCTGAGCTATTCGGAAGCAGCATCCAAGTCTGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGGGGCAGAGGTCCTGAGCTATTCGGAAGCAGCATCCAAGTCTGAC  627

seq1  ATCATAATCCTAGCCATGCACAGAGAGCACTATGATTCCCTCACGGAACT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATAATCCTAGCCATGCACAGAGAGCACTATGATTCCCTCACGGAACT  677

seq1  AGTTGATTATCTCAAAGGAAAAGTATTGGTAGACGTCAGTAACAACCGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGATTATCTCAAAGGAAAAGTATTGGTAGACGTCAGTAACAACCGCA  727

seq1  AAATCAATCAGTATCCAGAGTCAAATGCGGAATACCTTGCTCAGCTGGAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAATCAGTATCCAGAGTCAAATGCGGAATACCTTGCTCAGCTGGAG  777

seq1  CCAGGAGCCCACGTGGTCAAAGCATTTAACACCATCTCAGCCTGGGCTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAGCCCACGTGGTCAAAGCATTTAACACCATCTCAGCCTGGGCTCT  827

seq1  CCAGTCAGGAACACTAGATGCAAGCCGGCAGGTAAGATTAAATGAACTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCAGGAACACTAGATGCAAGCCGGCAGGTAAGATTAAATGAACTTG  877

seq1  AATTCAGTCGTTTAAAGGTGAATGTTTTAATATGTCCATACCTGAATGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGTCGTTTAAAGGTGAATGTTTTAATATGTCCATACCTGAATGCA  927

seq1  ACTCTTTTAAAATCCCTATTAAATATTTCATTTATCTCATTGTGCTAAGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTTTTAAAATCCCTATTAAATATTTCATTTATCTCATTGTGCTAAGG  977

seq1  ACAACTTTCTTGGGGTTCGTTGAGAAGCGTAGTCTATTGTGGTTCATGTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTTTCTTGGGGTTCGTTGAGAAGCGTAGTCTATTGTGGTTCATGTG  1027

seq1  TATTAGTAGTTTGATGGGACCGAATCATATCTGAATCTGGAATTC  1094
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGTAGTTTGATGGGACCGAATCATATCTGAATCTGGAATTC  1072