BAC Information

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BAC

Clone NameB6Ng01-065D24
Chromosome5 (Build37)
Map Location 85,773,904 - 85,774,351
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha5
Downstream geneCenpc1, LOC100039521, AI586015, Ube1l2, Gnrhr, Tmprss11c, Tmprss11d
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065D24.bB6Ng01-065D24.g
ACCDH884783DH884784
length1,152442
definitionDH884783|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D24, 5' end.DH884784|Mus musculus domesticus DNA, BAC clone: B6Ng01-065D24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagatggcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggggatctttccatctt
ctgagatcttctttaatttctttcttcagtgacttgaagtttttatcata
cagatctttcacttccttcgttagagtcacgccgagatattttatattat
ttggtggctattgagaggttgtgtttccctatttcttctcagcctgttta
tccttgtgtgaggaaagcccatgacttggttgagttattttatttccagc
cacttcaccgagctgttatcaggttaggagagttctctgtgggattttag
gcacttatttgactatactatcatctccgagagaggaatttgtccctccg
tc
aggtttttaaggtaaaatttaaacaacatattcttttgcagaaaaggcat
atatggaattcagttaagggcaagcatgtatgtggggctcttgtaagaga
gacaggtaggtgatacagatacaaattgagtgcttacacttcagagagtg
aatatggccagaatgattattcccacagaatcttttcagagtagataatc
ccatcctctttggatagaaagagccacactagatgcagctggacagtacg
tacaacattatgaccaaagaagtggaggattagagtctcagggaactatg
tgttatcagtacaaaggaataaggctttagttttgtcaatgacaacagca
gatggtgtgtgtgtgtgtgtgtgtgtgtgtgtgcctatgtgtgcctatat
gtgtatatgtataccttgtggggtgtgtgtgtgtgtttttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_85773904_85774351
seq2: B6Ng01-065D24.g_67_514 (reverse)

seq1  ACAAACACACACACACACACCCCACAAGGTATACATATACACATATAGGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAACACACACACACACCCCACAAGGTATACATATACACATATAGGC  50

seq1  ACAAATAGGCACACACACACACACACACACACACACACCATCTGCTGTTG  100
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAGGCACACACACACACACACACACACACACACCATCTGCTGTTG  100

seq1  TCATTGACAAAACTAAAGCCTTATTCCTTTGTACTGATAACACATAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGACAAAACTAAAGCCTTATTCCTTTGTACTGATAACACATAGTTC  150

seq1  CCTGAGACTCTAATCCTCCACTTCTTTGGTCATAATGTTGTACGTACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGACTCTAATCCTCCACTTCTTTGGTCATAATGTTGTACGTACTGT  200

seq1  CCAGCTGCATCTAGTGTGGCTCTTTCTATCCAAAGAGGATGGGATTATCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGCATCTAGTGTGGCTCTTTCTATCCAAAGAGGATGGGATTATCT  250

seq1  ACTCTGAAAAGATTCTGTGGGAATAATCATTCTGGCCATATTCACTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAAAAGATTCTGTGGGAATAATCATTCTGGCCATATTCACTCTCT  300

seq1  GAAGTGTAAGCACTCAATTTGTATCTGTATCACCTACCTGTCTCTCTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTAAGCACTCAATTTGTATCTGTATCACCTACCTGTCTCTCTTAC  350

seq1  AAGAGCCCCACATACATGCTTGCCCTTAACTGAATTCCATATATGCCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCCCCACATACATGCTTGCCCTTAACTGAATTCCATATATGCCTTT  400

seq1  TCTGCAAAAGAATATGTTGTTTAAATTTTACCTTAAAAACCTGAATTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCAAAAGAATATGTTGTTTAAATTTTACCTTAAAAACCTGAATTC  448