BAC Information

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BAC

Clone NameB6Ng01-065H07
Chromosome5 (Build37)
Map Location 67,858,878 - 67,859,806
singlet/doubletsinglet
Overlap genenone
Upstream geneApbb2, Uchl1, LOC100041876, 3732412D22Rik, LOC624662, Phox2b, Tmem33, Slc30a9, EG666938
Downstream geneC330024D21Rik, D830007B15Rik, Atp8a1, LOC100042458, EG330097, EG666977, AY616753
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065H07.bB6Ng01-065H07.g
ACCDH884926DH884927
length9131,158
definitionDH884926|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H07, 5' end.DH884927|Mus musculus domesticus DNA, BAC clone: B6Ng01-065H07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctatgtaatttatttcaaagagcattgctgggcggcaaaatg
aggtctacagggcaaatagagcaaatacatggttgtggcagcattagata
agcctattaatattaagatgattgaacaaaggcaccgcctaacatgtctt
agtacttagatgccatcttaattcttggataaccttagtctgcatagctt
attccagtcattgtccttgtgtttcctactgaaataggctagttggtgag
aacgtctgtctagttggtgagaacgtctgtccatttttactgaacctgct
gacttcccagagttccattggtggctttctggattgccttaggtcttgct
tcaggacaacggaatggtatatctcctatgggtccccttaagcttatctt
ttgctcatttgctgtccctctaaggaaaccttgggtcatgataactgttt
cttattttggtggtttgtatacgaatggcatccagagactcgtgtgttta
ttcacgtgtttggcccctagggagtgacattgttaggaagtgtggcccag
ggacattgtcactgtggaggcaactctgaggtctcatatgcttaagctag
gcctagtgtggcatttacttcttctgcctgtggatcaagatgtagagctc
tcagctccttctctagcatcttggctgcctgtatgcctcctgccatgatg
ataaaacattaaacttatgaaactgtagccagcttgagttaaatgtttcc
tttattagagttgccatggtcaaagtggtctctcaagcagtagaacccta
ctagaccgcttaacccacaactgctgtcaagcaaacatagtgttgtcata
tttctttgcagtgtgctatagacatggagaaatactctttccctgatgct
gccaccttgattt
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaaat
gttcaacatccttaatcatcagagaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacag
cagatgctggcgtggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtaagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactattcagctattaaaaagaatgaatttatgaaattcttagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagccccaaac
ctaggatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccttagaattggga
acaaaacacccatggaaggagatacagagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttattgaa
aggacccagatgtagttgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgctcacagtcagctattggatggatcacagggctccc
aatggaggagctagagaagtagccatgagctaaggatctgcacccttata
gttgacaacattatgactaccagtacccggagtcttgactctagctgcaa
ttgtatcaaaaatggcctagtcgcctcactggaagaaggcattctgacac
cgaactttaattgccagttcgggaatgccaggcaatgggggagatggggt
gtgtgcgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_67858878_67859806
seq2: B6Ng01-065H07.b_44_956

seq1  GAATTCTCCTATGTAATTTATTTCAAAGAGCATTGCTGGGCGGCAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCTATGTAATTTATTTCAAAGAGCATTGCTGGGCGGCAAAATG  50

seq1  AGGTCTACAGGGCAAATAGAGCAAATACATGGTTGTGGCAGCATTAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTACAGGGCAAATAGAGCAAATACATGGTTGTGGCAGCATTAGATA  100

seq1  AGCCTATTAATATTAAGATGATTGAACAAAGGCACCGCCTAACATGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTATTAATATTAAGATGATTGAACAAAGGCACCGCCTAACATGTCTT  150

seq1  AGTACTTAGATGCCATCTTAATTCTTGGATAACCTTAGTCTGCATAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTAGATGCCATCTTAATTCTTGGATAACCTTAGTCTGCATAGCTT  200

seq1  ATTCCAGTCATTGTCCTTGTGTTTCCTACTGAAATAGGCTAGTTGGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAGTCATTGTCCTTGTGTTTCCTACTGAAATAGGCTAGTTGGTGAG  250

seq1  AACGTCTGTCTAGTTGGTGAGAACGTCTGTCCATTTTTACTGAACCTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTCTGTCTAGTTGGTGAGAACGTCTGTCCATTTTTACTGAACCTGCT  300

seq1  GACTTCCCAGAGTTCCATTGGTGGCTTTCTGGATTGCCTTAGGTCTTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCCAGAGTTCCATTGGTGGCTTTCTGGATTGCCTTAGGTCTTGCT  350

seq1  TCAGGACAACGGAATGGTATATCTCCTATGGGTCCCCTTAAGCTTATCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACAACGGAATGGTATATCTCCTATGGGTCCCCTTAAGCTTATCTT  400

seq1  TTGCTCATTTGCTGTCCCTCTAAGGAAACCTTGGGTCATGATAACTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCATTTGCTGTCCCTCTAAGGAAACCTTGGGTCATGATAACTGTTT  450

seq1  CTTATTTTGGTGGTTTGTATACGAATGGCATCCAGAGACTCGTGTGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTGGTGGTTTGTATACGAATGGCATCCAGAGACTCGTGTGTTTA  500

seq1  TTCACGTGTTTGGCCCCTAGGGAGTGACATTGTTAGGAAGTGTGGCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACGTGTTTGGCCCCTAGGGAGTGACATTGTTAGGAAGTGTGGCCCAG  550

seq1  GGACATTGTCACTGTGGAGGCAACTCTGAGGTCTCATATGCTTAAGCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGTCACTGTGGAGGCAACTCTGAGGTCTCATATGCTTAAGCTAG  600

seq1  GCCTAGTGTGGCATTTACTTCTTCTGCCTGTGGATCAAGATGTAGAGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTGTGGCATTTACTTCTTCTGCCTGTGGATCAAGATGTAGAGCTC  650

seq1  TCAGCTCCTTCTCTAGCATCTTGGCTGCCTGTATGCCTCCTGCCATGATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTCCTTCTCTAGCATCTTGGCTGCCTGTATGCCTCCTGCCATGATG  700

seq1  ATAAAACATTAAACTTATGAAACTGTTAGCCAGCTTGAGTTAAATGTTTT  750
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  ATAAAACATTAAACTTATGAAACTG-TAGCCAGCTTGAGTTAAATG-TTT  748

seq1  CCTTTATTAGAGTTGCCATGGTCATAGT-GTCTCTTCAAAGCAGTAGAAA  799
      |||||||||||||||||||||||| ||| ||||||   ||||||||| ||
seq2  CCTTTATTAGAGTTGCCATGGTCAAAGTGGTCTCT--CAAGCAGTAG-AA  795

seq1  CCCTAACTAAGACGCTTAAACCCACAACTTGCTGTTCAAGGCACACATAG  849
      |||| ||||   ||||| |||||||||| ||||| |||| ||| ||||||
seq2  CCCT-ACTAGACCGCTT-AACCCACAAC-TGCTG-TCAA-GCAAACATAG  840

seq1  TGTTGTCCATATTTCTTTGCAGTGTTGCTATAGGACATGGGAGAAATTAC  899
      |||||| ||||||||||||||||| ||||||| ||||| ||||||| |||
seq2  TGTTGT-CATATTTCTTTGCAGTG-TGCTATA-GACAT-GGAGAAA-TAC  885

seq1  TCTTTCTCCTGATGCTTGCCACCTTGATTT  929
      |||||| |||||||| ||||||||||||||
seq2  TCTTTC-CCTGATGC-TGCCACCTTGATTT  913