BAC Information

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BAC

Clone NameB6Ng01-065L08
Chromosome5 (Build37)
Map Location 103,687,522 - 103,688,501
singlet/doubletsinglet
Overlap gene4930429D17Rik
Upstream geneLOC625780, Arhgap24, Mapk10, LOC666563
Downstream geneLOC100041039, 1700021F02Rik, LOC100041049, Ptpn13, Slc10a6, 1700016H13Rik, Aff1, Klhl8, Hsd17b13, EG666629, Hsd17b11, Nudt9, Sparcl1, LOC100041136, Dspp, Dmp1, LOC100041145
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065L08.bB6Ng01-065L08.g
ACCDH885103DH885104
length9791,137
definitionDH885103|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L08, 5' end.DH885104|Mus musculus domesticus DNA, BAC clone: B6Ng01-065L08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagcccagcgtcaactcaaggactacctagggcattggtgaag
gccaggaagcaaagttcaattttgcttaggtatttggcaagtcattgctt
ggagacacctataataaaacaatactgaaagaaagcagacaaatccatac
tctgactaacacaaggacaaaattggagcatacgtaccatgggatgccat
ggtcctaggatactaagtttccatgaacttttcgcctcgggactgctacc
aggtttctaggcctgtcacacaggtcactactggagtggatgtagcacta
aaggaaagcgtgtgttcagagactgagctgaggagcagactaagtcagac
gcaggctaagtctctagcagctgctctaacttagaaaagacagagaaaaa
cacagaaaatggtctagaattctgctctgtgcacacagattttcttagac
aagaagtaatctggcctctatctcctgttcctcaagactgatgttgcact
tgggtctgtggacatgatgtttcacaaaacgtaagcataagcagaacctg
ttgctggagtcctgagggtggcccatatggatttaaatttctttatgcag
aaaccaactttaaatacagtgataaaaatagatatcaattgaccttttat
caaaagaaaaaacaaagagctcattctttcaagcataatgatagacagaa
agctaagattatttctgtttaaagcactttttcaccctgtatagtgtgtt
gatatttacttctgaaagatcctgacagaatgtaaaaggtcacagaagcc
ctgaaattggcaagatagatgtcattgttagcagaactagcttcactgat
ttagaaaaatagaggtacacaatgctctagccactccttgaacccgtgtg
tctgccaatgttttgaccagtccttgaacccatgtgtgtgcccgctgatg
aagcccattgccagtgttggtgaaattgg
gaattccaaaacccacatcctattgtcattgcccttggtcagtccccaga
ggtggaaggtaagtccctattgttgaaggatgcacttcacacacaggcct
cagagacccttgaactggaaccgacctgaatgcccccgccctgagaacta
gctttcatggtacgagaaggtgtcatgaagctttcaaaggagggagagaa
ccaatagtctcacccagctatgctgcctatggacctcagtgaccagcatg
gcatcgtaactatggcgaggtaaagacatacaaaccttagtgatagtcaa
ggactctctaactggacttaagatccattcaacaagaagcacaccatgcc
tagcactggaaacctagataacttctcaatgatagcgaagccacggttat
tagaggagagtctgcagccactaatttactaaccgagcataacctctaag
gacaacctataaacattttttcttatagccacagataagtgctgtcttca
cttttcaccaagaaacctctttggaatatctggagaccactacagaaaac
cacaaccaatcaaaatccagagttgtagagcctggtcccaagggatacat
gtacaaaacactcccacaggccaggcttggggaacgtttcaaaataaggg
cctgaaagatcctagcagttagagatcagggggtttgatgtgaggtcatg
tctacagtagcattggaagctatacccataaagtctaccagtatgaccag
ccagatgtgagctgaatgaagaggacaccaatgaacacgaggccttgacc
ctctacaaagaactgcaggggactgaggagagctgggaacaagataggcc
ctcttcaggaagagtacaccaactgattgtccaatgccaagtgatcatcc
ctgaaacatacatacagtagcatgacaaagattcataggtgttttaggaa
atacatatatgtatatacaatactatacacattttttaaagattattatt
attattattttatttatgtgggtacaccgcagccgctcagaccccactaa
gaaaggggatctattccatccagagggtgtgagccccatatggttgctgg
gatttaatcatatctccagatgacgggggcgtctatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_103687522_103688501
seq2: B6Ng01-065L08.b_46_1024

seq1  GAATTCCAAGCCCAGCGTCAACTCAAGGACTACCTAGGGCATTGGTGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCCCAGCGTCAACTCAAGGACTACCTAGGGCATTGGTGAAG  50

seq1  GCCAGGAAGCAAAGTTCAATTTTGCTTAGGTATTTGGCAAGTCATTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAGCAAAGTTCAATTTTGCTTAGGTATTTGGCAAGTCATTGCTT  100

seq1  GGAGACACCTATAATAAAACAATACTGAAAGAAAGCAGACAAATCCATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACACCTATAATAAAACAATACTGAAAGAAAGCAGACAAATCCATAC  150

seq1  TCTGACTAACACAAGGACAAAATTGGAGCATACGTACCATGGGATGCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTAACACAAGGACAAAATTGGAGCATACGTACCATGGGATGCCAT  200

seq1  GGTCCTAGGATACTAAGTTTCCATGAACTTTTCGCCTCGGGACTGCTACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCTAGGATACTAAGTTTCCATGAACTTTTCGCCTCGGGACTGCTACC  250

seq1  AGGTTTCTAGGCCTGTCACACAGGTCACTACTGGAGTGGATGTAGCACTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTAGGCCTGTCACACAGGTCACTACTGGAGTGGATGTAGCACTA  300

seq1  AAGGAAAGCGTGTGTTCAGAGACTGAGCTGAGGAGCAGACTAAGTCAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGCGTGTGTTCAGAGACTGAGCTGAGGAGCAGACTAAGTCAGAC  350

seq1  GCAGGCTAAGTCTCTAGCAGCTGCTCTAACTTAGAAAAGACAGAGAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCTAAGTCTCTAGCAGCTGCTCTAACTTAGAAAAGACAGAGAAAAA  400

seq1  CACAGAAAATGGTCTAGAATTCTGCTCTGTGCACACAGATTTTCTTAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAATGGTCTAGAATTCTGCTCTGTGCACACAGATTTTCTTAGAC  450

seq1  AAGAAGTAATCTGGCCTCTATCTCCTGTTCCTCAAGACTGATGTTGCACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTAATCTGGCCTCTATCTCCTGTTCCTCAAGACTGATGTTGCACT  500

seq1  TGGGTCTGTGGACATGATGTTTCACAAAACGTAAGCATAAGCAGAACCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGTGGACATGATGTTTCACAAAACGTAAGCATAAGCAGAACCTG  550

seq1  TTGCTGGAGTCCTGAGGGTGGCCCATATGGATTTAAATTTCTTTATGCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGAGTCCTGAGGGTGGCCCATATGGATTTAAATTTCTTTATGCAG  600

seq1  AAACCAACTTTAAATACAGTGATAAAAATAGATATCAATTGACCTTTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAACTTTAAATACAGTGATAAAAATAGATATCAATTGACCTTTTAT  650

seq1  CAAAAGAAAAAACAAAGAGCTCATTCTTTCAAGCATAATGATAGACAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAAAAACAAAGAGCTCATTCTTTCAAGCATAATGATAGACAGAA  700

seq1  AGCTAAGATTATTTCTGTTTAAAGCACTTTTTCACCCTGTATAGTGTGTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGATTATTTCTGTTTAAAGCACTTTTTCACCCTGTATAGTGTGTT  750

seq1  GATATTTACTTCTGAAAGATCCTGACAGAATGTAAAAGGTCACAGAAGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATTTACTTCTGAAAGATCCTGACAGAATGTAAAAGGTCACAGAAGCC  800

seq1  CTGAAATTGGCAAGATAGATGTCATTGTTAGCAGAACTAGCTTCACTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTGGCAAGATAGATGTCATTGTTAGCAGAACTAGCTTCACTGAT  850

seq1  TTAGAAAAATAGAGGTACACAATGCTCTAGCCACTCCTTGAACCCGTGTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAAATAGAGGTACACAATGCTCTAGCCACTCCTTGAACCCGTGTG  900

seq1  TCTGCCAATGTTTTGACCAGTCCTTGAACCCATGTGTGTGCCCGCTGATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCAATGTTTTGACCAGTCCTTGAACCCATGTGTGTGCCCGCTGATG  950

seq1  AAGCCCATTGCCAGGTGTTTGTGATATTGG  980
      ||||||||||||| ||||| |||| |||||
seq2  AAGCCCATTGCCA-GTGTTGGTGAAATTGG  979