BAC Information

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BAC

Clone NameB6Ng01-065M21
Chromosome5 (Build37)
Map Location 128,184,840 - 128,300,025
singlet/doubletdoublet
Overlap geneTmem132d
Upstream geneLOC100040327, Tmem132c, Slc15a4, Glt1d1
Downstream geneFzd10, LOC100040398, Piwil1, Rimbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065M21.bB6Ng01-065M21.g
ACCDH885171DH885172
length655220
definitionDH885171|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M21, 5' end.DH885172|Mus musculus domesticus DNA, BAC clone: B6Ng01-065M21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,184,840 - 128,185,494)(128,299,806 - 128,300,025)
sequence
gaattcccctaatgtgctttaagtcaggcctgcgagctcacttggtggtc
tctctctctatcttggtaatcagagactccagcacactggacttctgcag
aataaaacactctttgtgtttatatattatttgggtccaggatatcattc
tacagtggatcatagaccctcacaacagctggccagtgtgagctcagaga
tggtaaccagcgtgtcggaaatcacacagcagagagaaaaggtgcagaat
tggaacccagaattggccctgggtcccagaacttccttctgcaccaggca
ttgcctgtggcataacaaacttctctgaccccagtatgtgagccgagcgt
ctctagctatggccataaaagagggaagaaattgtgactcctgaatcact
gcaaagaaagtgattattgatattaactacaatattaatgttatatttat
atatcatacataatactggatattttataatattaaatgtatggcattaa
atataatattaattcatatatttatatttatatatatttcaactgaatta
aaagccaaaagaaaggggggcaggtttatttgggaatgggctcctgggtg
agttcaccagtccctggggatgagagcaggggtggggatgaggactgtgg
gggtg
accaattttgcatttatgtgtgcatgtagggggagtgcatgaggtatgtg
cacgtgcgcacgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtg
tgtgtgtgtctgtgtctgtgtctgtgtctgtgtctgtgtgtgtctgtgtg
tgttatatgtgtgcatgtaggagggtctgggaggtattatgcatgtgtga
tatatgtgtgtttgtgggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_128184840_128185494
seq2: B6Ng01-065M21.b_48_702

seq1  GAATTCCCCTAATGTGCTTTAAGTCAGGCCTGCGAGCTCACTTGGTGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCTAATGTGCTTTAAGTCAGGCCTGCGAGCTCACTTGGTGGTC  50

seq1  TCTCTCTCTATCTTGGTAATCAGAGACTCCAGCACACTGGACTTCTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTATCTTGGTAATCAGAGACTCCAGCACACTGGACTTCTGCAG  100

seq1  AATAAAACACTCTTTGTGTTTATATATTATTTGGGTCCAGGATATCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACACTCTTTGTGTTTATATATTATTTGGGTCCAGGATATCATTC  150

seq1  TACAGTGGATCATAGACCCTCACAACAGCTGGCCAGTGTGAGCTCAGAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTGGATCATAGACCCTCACAACAGCTGGCCAGTGTGAGCTCAGAGA  200

seq1  TGGTAACCAGCGTGTCGGAAATCACACAGCAGAGAGAAAAGGTGCAGAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAACCAGCGTGTCGGAAATCACACAGCAGAGAGAAAAGGTGCAGAAT  250

seq1  TGGAACCCAGAATTGGCCCTGGGTCCCAGAACTTCCTTCTGCACCAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACCCAGAATTGGCCCTGGGTCCCAGAACTTCCTTCTGCACCAGGCA  300

seq1  TTGCCTGTGGCATAACAAACTTCTCTGACCCCAGTATGTGAGCCGAGCGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTGTGGCATAACAAACTTCTCTGACCCCAGTATGTGAGCCGAGCGT  350

seq1  CTCTAGCTATGGCCATAAAAGAGGGAAGAAATTGTGACTCCTGAATCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCTATGGCCATAAAAGAGGGAAGAAATTGTGACTCCTGAATCACT  400

seq1  GCAAAGAAAGTGATTATTGATATTAACTACAATATTAATGTTATATTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAAGTGATTATTGATATTAACTACAATATTAATGTTATATTTAT  450

seq1  ATATCATACATAATACTGGATATTTTATAATATTAAATGTATGGCATTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCATACATAATACTGGATATTTTATAATATTAAATGTATGGCATTAA  500

seq1  ATATAATATTAATTCATATATTTATATTTATATATATTTCAACTGAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATATTAATTCATATATTTATATTTATATATATTTCAACTGAATTA  550

seq1  AAAGCCAAAAGAAAGGGGGGCAGGTTTATTTGGGAATGGGCTCCTGGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAAAGAAAGGGGGGCAGGTTTATTTGGGAATGGGCTCCTGGGTG  600

seq1  AGTTCACCAGTCCCTGGGGATGAGAGCAGGGGTGGGGATGAGGACTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCACCAGTCCCTGGGGATGAGAGCAGGGGTGGGGATGAGGACTGTGG  650

seq1  GGGTG  655
      |||||
seq2  GGGTG  655

seq1: chr5_128299806_128300025
seq2: B6Ng01-065M21.g_74_293 (reverse)

seq1  TTCCCACAAACACACATATATCACACATGCATAATACCTCCCAGACCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACAAACACACATATATCACACATGCATAATACCTCCCAGACCCTC  50

seq1  CTACATGCACACATATAACACACACAGACACACACAGACACAGACACAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGCACACATATAACACACACAGACACACACAGACACAGACACAGA  100

seq1  CACAGACACAGACACACACACACACACACACACACACACACAGACACACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACACAGACACACACACACACACACACACACACACACAGACACACA  150

seq1  CACACACACGTGCGCACGTGCACATACCTCATGCACTCCCCCTACATGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACGTGCGCACGTGCACATACCTCATGCACTCCCCCTACATGCA  200

seq1  CACATAAATGCAAAATTGGT  220
      ||||||||||||||||||||
seq2  CACATAAATGCAAAATTGGT  220