BAC Information

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BAC

Clone NameB6Ng01-066N10
Chromosome5 (Build37)
Map Location 132,090,815 - 132,091,346
singlet/doubletsinglet
Overlap geneAuts2
Upstream geneCaln1, Wbscr17
Downstream gene4930563F08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066N10.bB6Ng01-066N10.g
ACCDH885903DH885904
length1,045627
definitionDH885903|Mus musculus domesticus DNA, BAC clone: B6Ng01-066N10, 5' end.DH885904|Mus musculus domesticus DNA, BAC clone: B6Ng01-066N10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtatgggaaagaaccgaggagatgaaggggggagagagatg
atataaggtccgaaggaaggaaagaatgaaataaggaaagaaagaaatcc
ccaatcaaagaaagaaataagtaaagatccaaagaaagaaggaaggaagg
gatggatgtcttatagacagtgtcttttgccttgcagaaactttggagtt
tcattaggtcccatttgtcaattctcgatcttacagcacaagccattgct
gttctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccc
cactttctcctctataagtttcagtgtctctggttttatgtgaagttcct
tgatccacttagatttgaccttagtacaaggagataagtatggatcgatt
cgcattcttctacatgataacaaccagttgtgccagcaccaattgttgaa
aatgctgtctttcttccactggatggttttggctcccttgtcgaagatca
agtgaccataggtgtgtgggttcatttctgggtcttcaattctattccat
tggtccacttgtctgtctctataccagtaccatgcagtttttatcacaat
tgctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttc
ttttatccttgagaagagtttttgctatcctcggttttttgttattccag
atgaattttgcaaattgctcctttctaattcgttgaagaattgagttgga
atttttaatggggattgcattgaatctgtagattgcttttggcaagatag
ccatttttacaatgttggtcctgccatccatgagcatgggagatctttcc
tcttctgagatcttctttaatttctttcttcagggacttgaagttttttc
atacagatctttcactccttcgtagagcacgcgaagaatttatattatat
gtggcaatgagaaggtgtagttcctattcttcacagcctgtttatttttg
tgtttataaagggcatgtattgtttaattaattatattccaccta
gaattccctgacttcgctgggtaccctgagaaaccctgtgttacttttaa
tttaagaaaaaaagaaaaaataataaaaggaggatgagggggaagatatc
aagtaatccagagatgcccagggctctcaggtagtagcatgaagtaggat
gggtgttttccagaattcggtgagaatgaacctggaagagggggaggggc
cgttcaagagtgcgttttaccctcctagagtttccatcttgaaaatctgg
ggcttgggctgttcggtcggaggcgttggatagctcagggacggccagct
ttcagattacggatctctaaagagtgaaggtatttaccttggttggggag
taatctggtaattagagagttgttatttgcttctctggcagtatagtgtt
tactttcctcttctaaagggttgttggtgctttttttttttttttttttt
tttacttgtgggaagctatagaattggagaaaactggagagaaagctcta
ctcaaaatataattacataatttgcttccagtgattgtgggggagggtgt
aattttgagtgtcattttggggactcctgttatcccagctctgagaagcc
ctcaatttttggccattctttgggttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_132090815_132091346
seq2: B6Ng01-066N10.g_165_695 (reverse)

seq1  AAACCCAAAG-ATGGCCAAAACTCTGAGGGCTTCTCATGAGCTGGGCTAA  49
      |||||||||| |||||||||| | ||||||||||||| |||||||| |||
seq2  AAACCCAAAGAATGGCCAAAAAT-TGAGGGCTTCTCA-GAGCTGGGATAA  48

seq1  CAGGAGTCCCCAAACTGACACTCAAGATTACACCCTCCCCCACAATCACT  99
      |||||||||||||| |||||||||| ||||||||||||||||||||||||
seq2  CAGGAGTCCCCAAAATGACACTCAAAATTACACCCTCCCCCACAATCACT  98

seq1  GGAAGCAAATTATGTAATTATATTTTGAGTAGAGCTTTCTCTCCAGTTTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAAATTATGTAATTATATTTTGAGTAGAGCTTTCTCTCCAGTTTT  148

seq1  CTCCAATTCTATAGCTTCCCACAAGTAAAAAAAAAAAAAAAAAAAAAAAG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAATTCTATAGCTTCCCACAAGTAAAAAAAAAAAAAAAAAAAAAAAG  198

seq1  CACCAACAACCCTTTAGAAGAGGAAAGTAAACACTATACTGCCAGAGAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACAACCCTTTAGAAGAGGAAAGTAAACACTATACTGCCAGAGAAG  248

seq1  CAAATAACAACTCTCTAATTACCAGATTACTCCCCAACCAAGGTAAATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAACAACTCTCTAATTACCAGATTACTCCCCAACCAAGGTAAATAC  298

seq1  CTTCACTCTTTAGAGATCCGTAATCTGAAAGCTGGCCGTCCCTGAGCTAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTCTTTAGAGATCCGTAATCTGAAAGCTGGCCGTCCCTGAGCTAT  348

seq1  CCAACGCCTCCGACCGAACAGCCCAAGCCCCAGATTTTCAAGATGGAAAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACGCCTCCGACCGAACAGCCCAAGCCCCAGATTTTCAAGATGGAAAC  398

seq1  TCTAGGAGGGTAAAACGCACTCTTGAACGGCCCCTCCCCCTCTTCCAGGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGGGTAAAACGCACTCTTGAACGGCCCCTCCCCCTCTTCCAGGT  448

seq1  TCATTCTCACCGAATTCTGGAAAACACCCATCCTACTTCATGCTACTACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTCACCGAATTCTGGAAAACACCCATCCTACTTCATGCTACTACC  498

seq1  TGAGAGCCCTGGGCATCTCTGGATTACCTGATA  532
      ||||||||||||||||||||||||||| |||||
seq2  TGAGAGCCCTGGGCATCTCTGGATTACTTGATA  531