BAC Information

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BAC

Clone NameB6Ng01-067M01
Chromosome5 (Build37)
Map Location 43,762,935 - 43,763,858
singlet/doubletsinglet
Overlap genenone
Upstream geneEG636612, LOC433883, EG665934, Cpeb2
Downstream geneC1qtnf7, 4833430A08Rik, 5730509K17Rik, Fbxl5, Bst1, Cd38, EG665989, EG665994, LOC100040677, EG384179, Fgfbp1, Prom1, LOC100041413, Tapt1, LOC100040717
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067M01.bB6Ng01-067M01.g
ACCDH886540DH886541
length1,226924
definitionDH886540|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M01, 5' end.DH886541|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M01, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaaaacttttatcaagaatgggtgttgaatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
atcgatattcataagagaaattggtctgaagttctctatctttgttgagt
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggtgatatgggactgtttagatggtcaacttgatcctgactcaactt
tggtacctggtatctttccagaaatttgtccttttcgtccaggttttcca
gttttgttgagtataaccttttgtagaaggatctgatgttgttttggatt
tcttcaggatctgttgttttggctcccttttcatttctgattttgttaat
taggatgctgtccctgtgccctctattcagtctagccaagggtttatcta
tcttgttgattttctcaaagaactaactcctcctttggttaattctttca
atagttcttcttgtttccacttgggttgatttcacccctgagtttgatta
tttccctgccgtctactcctcttgggtgaatttgcttcctttttttctag
agcttttagatgtgttgtcaagctgctagttatgtgctctctcccgtttc
ttcttggaggcactcagagctatgagtttccctcttagaaatgcttttca
ttgtgtccataggtttagggtcgttgtgcttcattttcataaacctctaa
aaagtctaatttctttcttttattcctctttgacccaggatcattgaaag
ggtgttgtcagttccacgtgaatgttgggctttcaatattatgtgtattg
agaatcagtcttagccatgtggtcggatggaatagggacatcaaattatg
agctcgtgagccgtgttgacctatgt
gaattctgtagagctttgcagcagatggtagatgtataattgatggagct
ggagttctaagcgtacccaggaggctgttgcttcacttgggagtgtcttt
gaatactgaatccaggctcaggactggattctgcagcaggatgaagctct
ggggtggtctccacagtcaaagtgatttcctaaataccatggtgcctaga
atagatggcctacatgctcccaactccagaatcatcactacaatgtctgt
ttgtgaaggccagaagaatgttgccttgactcagcgtcagaagtggaggt
actaatcatttgaatggcttgtgatactcaagaaaacaagaagtagctat
gaccagaatgctacaaatcactgccgtgagtcctgcattctgtctcagat
gcctcatcgctagcaataggcagtgtattgtagctcccaagcagacagac
ataactttatgttgaattgttttgcctgggtttgcttttttgagacaggg
tttctctacataaccctgactatcctggaacccgatacatagaaccatgt
cagccttgaactcacaaggatccaccttcctttccttcctggtggctgga
attaaaggtgccctcaaaccaagaatcattatactcttaagaccatcagt
ctcaacaccagttagaaaactcaaccaaagtttgagtttgttcctaaaga
actaaggaattcaaattgttggacattccctccaaataggaagaatcaag
acaggatcatttatgtgtggagttgttggtaaggagaagctgtcactctc
atgaacaccagaatgcacagacctagcagagaggatgtgtagttggaaga
ctctggagcatgttgccaagaatgctaaatgtttaagagtctgtaggtcc
tgagaaagtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_43762935_43763858
seq2: B6Ng01-067M01.g_66_989 (reverse)

seq1  CACACACACACACACACTTTCTCAGGACCTACAGACTCTTAAACCTTTAG  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CACACACACACACACACTTTCTCAGGACCTACAGACTCTTAAACATTTAG  50

seq1  CATTCTTGGCAACATGCTCCAGAGTCTTCCAACTACACATCCTCTCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTGGCAACATGCTCCAGAGTCTTCCAACTACACATCCTCTCTGCT  100

seq1  AGGTCTGTGCATTCTGGTGTTCATGAGAGTGACAGCTTCTCCTTACCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGTGCATTCTGGTGTTCATGAGAGTGACAGCTTCTCCTTACCAAC  150

seq1  AACTCCACACATAAATGATCCTGTCTTGATTCTTCCTATTTGGAGGGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCACACATAAATGATCCTGTCTTGATTCTTCCTATTTGGAGGGAAT  200

seq1  GTCCAACAATTTGAATTCCTTAGTTCTTTAGGAACAAACTCAAACTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAACAATTTGAATTCCTTAGTTCTTTAGGAACAAACTCAAACTTTGG  250

seq1  TTGAGTTTTCTAACTGGTGTTGAGACTGATGGTCTTAAGAGTATAATGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTTCTAACTGGTGTTGAGACTGATGGTCTTAAGAGTATAATGAT  300

seq1  TCTTGGTTTGAGGGCACCTTTAATTCCAGCCACCAGGAAGGAAAGGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTTTGAGGGCACCTTTAATTCCAGCCACCAGGAAGGAAAGGAAGG  350

seq1  TGGATCCTTGTGAGTTCAAGGCTGACATGGTTCTATGTATCGGGTTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCCTTGTGAGTTCAAGGCTGACATGGTTCTATGTATCGGGTTCCAG  400

seq1  GATAGTCAGGGTTATGTAGAGAAACCCTGTCTCAAAAAAGCAAACCCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGTCAGGGTTATGTAGAGAAACCCTGTCTCAAAAAAGCAAACCCAGG  450

seq1  CAAAACAATTCAACATAAAGTTATGTCTGTCTGCTTGGGAGCTACAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAATTCAACATAAAGTTATGTCTGTCTGCTTGGGAGCTACAATAC  500

seq1  ACTGCCTATTGCTAGCGATGAGGCATCTGAGACAGAATGCAGGACTCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTATTGCTAGCGATGAGGCATCTGAGACAGAATGCAGGACTCACG  550

seq1  GCAGTGATTTGTAGCATTCTGGTCATAGCTACTTCTTGTTTTCTTGAGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGATTTGTAGCATTCTGGTCATAGCTACTTCTTGTTTTCTTGAGTA  600

seq1  TCACAAGCCATTCAAATGATTAGTACCTCCACTTCTGACGCTGAGTCAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGCCATTCAAATGATTAGTACCTCCACTTCTGACGCTGAGTCAAG  650

seq1  GCAACATTCTTCTGGCCTTCACAAACAGACATTGTAGTGATGATTCTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACATTCTTCTGGCCTTCACAAACAGACATTGTAGTGATGATTCTGGA  700

seq1  GTTGGGAGCATGTAGGCCATCTATTCTAGGCACCATGGTATTTAGGAAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGAGCATGTAGGCCATCTATTCTAGGCACCATGGTATTTAGGAAAT  750

seq1  CACTTTGACTGTGGAGACCACCCCAGAGCTTCATCCTGCTGCAGAATCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGACTGTGGAGACCACCCCAGAGCTTCATCCTGCTGCAGAATCCA  800

seq1  GTCCTGAGCCTGGATTCAGTATTCAAAGACACTCCCAAGTGAAGCAACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGAGCCTGGATTCAGTATTCAAAGACACTCCCAAGTGAAGCAACAG  850

seq1  CCTCCTGGGTACGCTTAGAACTCCAGCTCCATCAATTATACATCTACCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGGGTACGCTTAGAACTCCAGCTCCATCAATTATACATCTACCAT  900

seq1  CTGCTGCAAAGCTCTACAGAATTC  924
      ||||||||||||||||||||||||
seq2  CTGCTGCAAAGCTCTACAGAATTC  924