BAC Information

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BAC

Clone NameB6Ng01-067M10
Chromosome5 (Build37)
Map Location 117,409,354 - 117,409,477
singlet/doubletsinglet
Overlap genenone
Upstream geneCit, Prkab1, LOC545798, Ccdc60, 4930562A09Rik, Hspb8, 1500001A10Rik, LOC433943, Gm1684
Downstream geneLOC665073, Suds3, Taok3, Pebp1, LOC100042313, LOC100039359, BC023744, LOC667175, Wsb2, Rfc5, Ksr2, Nos1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067M10.bB6Ng01-067M10.g
ACCDH886556DH886557
length1,162823
definitionDH886556|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M10, 5' end.DH886557|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaacctctgtggttatctggatgatattttgtttattagttac
ctaagagctatcatccaaatacaagtaaattcatagccacatctgtgttt
gcgttaccttgcttaggatgttttttcctagtttctctatttagcatata
aattcactatttaatttttaacatctgagtagtgttacataatcgtgtaa
atgtgccgccttttctgtattcattcatcagcagatgcacatcttggttg
ttttcaaattctggctattatgattagaacatcagagaacatggttgaat
aagggtctcaatagcaggatgatatattttttgggtttatgccaaaattg
ttctagctggatcttgaggtagatcacttcccatcttcctgaaatcacac
cgatttcacaaagtgattttgatttgcattcccctgattacaagaggtat
tgagcatttttaggagtctttcagtcatttgattttcttcttttgaaaat
tttctactcataactgtaatccattttaacttgttatttattttctttat
tttcagttatttagttctttatttactttagatattacccttccatttga
tgtgtagtccataaaaaatcttttcccatcctgtagtctgtcacttagtc
aaaattgtgatgttccttgctatgcaaatacttgtgtgtgttaattgttg
ctcttaggacctgtgtgatcaaggtagtgttctattaaaatgtcatttcc
cgtgtcaaagatttcgaaactattccccactatttcttgtattaaattct
gtggtgttggccttatgttcaggtctttgaaccatttggagttgagattt
ttgttgagtattaagagtggttctatttacattctaatacattcagcttt
atcagaatcatttgttggtgatgctatcttttttccccatgtgtgtttct
ggtttctttatcaaaaatcagtgttcatactgtgtgagttttttctgggt
cttcaatttcatgatcatgtgtttcatttagaaatgcaggcagtgtttat
tactatagctctgtagtacaattgtgaaaatcaggatggtgatagctcaa
aactcaatttaatctattaatgactgcttacaattgtctgtgggagaaat
ccatttgtcctg
gaattctatgtttaactctgtaccccattttaaaatagtttgttgttgtt
gttgttgttgttgttctctggagtctaacttctagagttctttgtatata
ttggatattagccctctatcggatgtagaattggtaaagatcttttccca
atctgttgcttgcccttttgtttttatagacagtgtcctttgcctcacag
aagtttcgaaagtttatgagattccttttgtcaattcttgttcttagagc
ataagcataatggtgttctgtttaggaaaatttcccctgtgcccatgtgc
tcgaggctcttccccccttccttccttccttccttccttccttccttcct
tcctttctttctttctttctttctttctttctttctttctttctttcttt
ctttctttctttcttttagacatatgttcatttattaactcttgaatggc
agaaacagcttgtagataggccccgatggagtagtcacaggtcaaccagt
cttgagtgtaacagcgagtgagagagctttgccatgaggtggtgtgggtg
tggttctgattcccttctaccacctctctggatacctgcaatagtcaaga
gagttggccctggagtcatgagagcatgagacttagtcctgccctgtcat
tgactgtagtacttaggaggagaccctgaagcatccctggacatctcagt
ggagctggccatgatggtaaagtcaaggatgaatcagccccaaggatgtc
agagtggaagagctgtcccagctcctcccagtttacagcattttggagag
tggacctcacctctaattgagca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_117409354_117409477
seq2: B6Ng01-067M10.g_384_485 (reverse)

seq1  AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA  50

seq1  AAGAAAGAGAAAGAAAGAAAAAGAAAGACAGAGAGAGGAAGGAAGGAAGG  100
      |||||||            ||||||          |||||||||||||||
seq2  AAGAAAG------------AAAGAA----------AGGAAGGAAGGAAGG  78

seq1  AAGGAAGGAAGGAAGGAAGGAAGG  124
      ||||||||||||||||||||||||
seq2  AAGGAAGGAAGGAAGGAAGGAAGG  102