BAC Information

Click to search

BAC

Clone NameB6Ng01-068D23
Chromosome7 (Build37)5 (Build37)
Map Location 131,946,554 - 131,947,70114,180,096 - 14,180,571
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG628779
Downstream geneEG545999, LOC670828, 4933440M02Rik, LOC100043014, Jmjd5, Nsmce1, EG244214, Il4ra, Il21r, Gtf3c1, D430042O09Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068D23.bB6Ng01-068D23.g
ACCDH886892DH886893
length1,140985
definitionDH886892|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D23, 5' end.DH886893|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(131,946,554 - 131,947,701)(14,180,096 - 14,180,571)
sequence
gaattcacaagcaagccatctgaagtgatgcgagcgttcctctttattgg
gatggtggctattctggcctttgtattggccaatgctatgcttaaaatgg
gtaacttttattttatggaaaagtatgccttgatggtgttgattaaaatg
gggctacaagtaggcaagtttagaaagaaagacgaaagagaacaattccc
aagggcttcagattcacgcttcctcggctgctttattaggaatggcaggt
ggctcttgccaaattgagtctatttttaggcaaagtctttattggcacac
ccttgggtctattttctagaactggaaatttcctttttcattttgctcac
tagaaagaagacaacatatctggggaaaactaagccacttgagcaagctg
tgggcttttgtccttcctgagatgtgctgaaaacaagagtttgatggaat
tttctctaattgtggtgattagtattttacagttggcctctgttgctatg
gatatgggaagaaaagtcatgggctgttctctgaggacctgaactctgtt
ctttgcttgtgactaagtgcctttgtgactcttcttgctctggccttcca
tctccttatataggggagggggactgaacccctgtctgacaagacaagag
aatgctctctgactgaggtaaggcagggtaaattattctaaatgccaata
ttattaaatatttttatttagaaaatcaggggtgtattttggctagaatt
actaaggttgggggcgaataatagcatatcttaaggtgaccacctaggtc
acctgacattgtagtggaaacacagaaaacaaagactggcagaccaaaat
agctcaactcacctctcccaaggtcccaggggatgttcagtgataaagag
cacttgccattctttcagaggaccagagtacagttcccagcatctttact
aaatgggtaacaaccacctgttattccagctaatctggcctcttgtctct
ggggacatttctatgcatgagtgtgcatgtgcgcaacaaccactacttat
acatgcaattatttaaaaaatcaaaggttatgaaatatatttcatctgag
aaatgacttaatctctccaatcgtgaatcctaactataca
gaattctgagctcctgattgctttgcttggggtagaatattctgtggtca
agagagcatcggctgatagttttctgtccctgtggtgttggtcaattgta
tatttacatatctgtttattcatgaattcaatgcatttatatttaatatc
tgccagttccacacacttctccggtctaaaggctgtcttgttaaacaagg
accttgccccatggggacataatttcagcagcacaggaacagtgagggtg
gaaacagatcagcagtgtaggttagtagcatggttatcccagcaagtaag
ggaagcaggattcgggacaaagctgagatgtttgtaagaatggataatca
cgcggctggggaggcgacctaagccacagcagcagcggtcgccatcttgg
tccgggacctgccgaacttaggaaattagtctgaacaggtgagagggtgc
gccagagaacctgacagcttctggaacaggcggaagcacagaggcgctga
ggcagcaccctttgtgggccggggacagccagccaccgtccggaccggag
gacaggtgcccgcccggctggggaggcggcctaagccacagcagcagcgg
tcgccatcttggtccgagacccgccgaacttaggaaattagtctgaacag
gtgagagggtgcgccagagaacctgacagcttctggaacaggcggaagca
cagaggcactgaggcagcaccctttgtgggccggggacagccagccaccg
tctggaccggaggacaggtgcccgcccggctggggaggcggcctaagcca
cagcagcagcggtcgccatcttggtccgggacccgccgaacttaggaaat
tagtctgaacaggtgagaggttgcgccagagaacctgacagcctctggac
aggcagaagcacagaggggctgaggcagcacctgttgtgggccgggacag
ccggccacctttcggaccggagacagtgcccgctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_131946554_131947701
seq2: B6Ng01-068D23.b_49_1188

seq1  GAATTCACAAGCAAGCCATCTGAAGTGATGCGAGCGTTCCTCTTTATTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAGCAAGCCATCTGAAGTGATGCGAGCGTTCCTCTTTATTGG  50

seq1  GATGGTGGCTATTCTGGCCTTTGTATTGGCCAATGCTATGCTTAAAATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTGGCTATTCTGGCCTTTGTATTGGCCAATGCTATGCTTAAAATGG  100

seq1  GTAACTTTTATTTTATGGAAAAGTATGCCTTGATGGTGTTGATTAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACTTTTATTTTATGGAAAAGTATGCCTTGATGGTGTTGATTAAAATG  150

seq1  GGGCTACAAGTAGGCAAGTTTAGAAAGAAAGACGAAAGAGAACAATTCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACAAGTAGGCAAGTTTAGAAAGAAAGACGAAAGAGAACAATTCCC  200

seq1  AAGGGCTTCAGATTCACGCTTCCTCGGCTGCTTTATTAGGAATGGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCTTCAGATTCACGCTTCCTCGGCTGCTTTATTAGGAATGGCAGGT  250

seq1  GGCTCTTGCCAAATTGAGTCTATTTTTAGGCAAAGTCTTTATTGGCACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTTGCCAAATTGAGTCTATTTTTAGGCAAAGTCTTTATTGGCACAC  300

seq1  CCTTGGGTCTATTTTCTAGAACTGGAAATTTCCTTTTTCATTTTGCTCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGGTCTATTTTCTAGAACTGGAAATTTCCTTTTTCATTTTGCTCAC  350

seq1  TAGAAAGAAGACAACATATCTGGGGAAAACTAAGCCACTTGAGCAAGCTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAAGAAGACAACATATCTGGGGAAAACTAAGCCACTTGAGCAAGCTG  400

seq1  TGGGCTTTTGTCCTTCCTGAGATGTGCTGAAAACAAGAGTTTGATGGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTTTTGTCCTTCCTGAGATGTGCTGAAAACAAGAGTTTGATGGAAT  450

seq1  TTTCTCTAATTGTGGTGATTAGTATTTTACAGTTGGCCTCTGTTGCTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTAATTGTGGTGATTAGTATTTTACAGTTGGCCTCTGTTGCTATG  500

seq1  GATATGGGAAGAAAAGTCATGGGCTGTTCTCTGAGGACCTGAACTCTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGGAAGAAAAGTCATGGGCTGTTCTCTGAGGACCTGAACTCTGTT  550

seq1  CTTTGCTTGTGACTAAGTGCCTTTGTGACTCTTCTTGCTCTGGCCTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGCTTGTGACTAAGTGCCTTTGTGACTCTTCTTGCTCTGGCCTTCCA  600

seq1  TCTCCTTATATAGGGGAGGGGGACTGAACCCCTGTCTGACAAGACAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTATATAGGGGAGGGGGACTGAACCCCTGTCTGACAAGACAAGAG  650

seq1  AATGCTCTCTGACTGAGGTAAGGCAGGGTAAATTATTCTAAATGCCAATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTCTCTGACTGAGGTAAGGCAGGGTAAATTATTCTAAATGCCAATA  700

seq1  TTATTAAATATTTTTATTTAGAAAATCAGGGGTGTATTTTGGCTAGAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAAATATTTTTATTTAGAAAATCAGGGGTGTATTTTGGCTAGAATT  750

seq1  ACTAAGGTTGGGGGCGAATAATAGCATATCTTAAGGTGACCACCTAGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTTGGGGGCGAATAATAGCATATCTTAAGGTGACCACCTAGGTC  800

seq1  ACCTGACATTGTAGTGGAAACACAGAAAACAAAGACTGGCAGACCAAAAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGACATTGTAGTGGAAACACAGAAAACAAAGACTGGCAGACCAAAAT  850

seq1  AGCTCAACTCACCTCTCCCAAGGTCCAAGGGGATGTTCAGTGATAAAGAG  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCTCAACTCACCTCTCCCAAGGTCCCAGGGGATGTTCAGTGATAAAGAG  900

seq1  CACTTGCCATTCTTTCAGAGGACCAGAGTACAGTTCCCAGCATCTTTACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCATTCTTTCAGAGGACCAGAGTACAGTTCCCAGCATCTTTACT  950

seq1  AAATGGTTAACAACCACCTGTTATTCCAGCTAAATCTGGCCTCTTGTCTC  1000
      |||||| |||||||||||||||||||||||| ||||||||||||||||||
seq2  AAATGGGTAACAACCACCTGTTATTCCAGCT-AATCTGGCCTCTTGTCTC  999

seq1  TGGGGACATTTCTATGCATGAGTGTGCATGTGCGCACACACACACATACA  1050
      |||||||||||||||||||||||||||||||||||| |||  ||| ||| 
seq2  TGGGGACATTTCTATGCATGAGTGTGCATGTGCGCA-ACAACCAC-TACT  1047

seq1  TATACATGCAATTAATTTAAAAAATACAAAAGTTATGAAATATATTTCAT  1100
      ||||||||||||| ||||||||||| |||| |||||||||||||||||||
seq2  TATACATGCAATT-ATTTAAAAAAT-CAAAGGTTATGAAATATATTTCAT  1095

seq1  CTTGAGAAAATGACTTAATCCCTCCAATCCTGAAATCCTAGCTATACA  1148
      | |||| ||||||||||||| |||||||| || ||||||| |||||||
seq2  C-TGAG-AAATGACTTAATCTCTCCAATCGTG-AATCCTAACTATACA  1140

seq1: chr5_14180096_14180571
seq2: B6Ng01-068D23.g_423_890 (reverse)

seq1  GATGGCGACCGCTGCTGCTGTGGCTTAGGCCGCCTCCCCAGCCGGGCGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCGACCGCTGCTGCTGTGGCTTAGGCCGCCTCCCCAGCCGGGCGGG  50

seq1  CACCTGTCCTCCGGTCCGGAAGGTGGCCGGCTGTCCCCGGCCCACGCAGG  100
      ||||||||||||||||| || |||||| |||||||||||||||||  |||
seq2  CACCTGTCCTCCGGTCCAGACGGTGGCTGGCTGTCCCCGGCCCACAAAGG  100

seq1  GTGCTGCCTCAGCGCCTCTTCGCCTCTGTGCTTCCGCCTGTTCCAGAAGC  150
      ||||||||||||         |||||||||||||||||||||||||||||
seq2  GTGCTGCCTCAG--------TGCCTCTGTGCTTCCGCCTGTTCCAGAAGC  142

seq1  TGTCAGGTTCTCTGGCGCACCCTCTCACCTGTTCAGACTAATTTCCTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGTTCTCTGGCGCACCCTCTCACCTGTTCAGACTAATTTCCTAAG  192

seq1  TTCGGCGGGTCCCGGACCAAGATGGCGACCGCTGCTGCTGTGGCTTAGGC  250
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCGGCGGGTCTCGGACCAAGATGGCGACCGCTGCTGCTGTGGCTTAGGC  242

seq1  CGCCTCCCCAGCCGGGCGGGCACCTGTCCTCCGGTCCGGAAGGTGGCCGG  300
      |||||||||||||||||||||||||||||||||||||||| |||||| ||
seq2  CGCCTCCCCAGCCGGGCGGGCACCTGTCCTCCGGTCCGGACGGTGGCTGG  292

seq1  CTGTCCCCGGCCCACACAGGGTGCTGCCTCAGCCCCTCTGTGCTTCTGCC  350
      |||||||||||||||| |||||||||||||||| |||||||||||| |||
seq2  CTGTCCCCGGCCCACAAAGGGTGCTGCCTCAGCGCCTCTGTGCTTCCGCC  342

seq1  TGTTCCAGAGGCTGTCAGGTTCTCTGGCGCACCCTCTCACCTGTTCAGAC  400
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCAGAAGCTGTCAGGTTCTCTGGCGCACCCTCTCACCTGTTCAGAC  392

seq1  TAATTTCCTAAGTTCGGCGGGTCTAGGACCAAGATGGCGACCGCTGCTGC  450
      |||||||||||||||||| ||||  |||||||||||||||||||||||||
seq2  TAATTTCCTAAGTTCGGCAGGTCCCGGACCAAGATGGCGACCGCTGCTGC  442

seq1  TGTGGCTTAGGTCGCCTCCCCAGCCG  476
      ||||||||||||||||||||||||||
seq2  TGTGGCTTAGGTCGCCTCCCCAGCCG  468