BAC Information

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BAC

Clone NameB6Ng01-069A07
Chromosome5 (Build37)
Map Location 97,800,451 - 97,801,583
singlet/doubletsinglet
Overlap genenone
Upstream geneFras1, Anxa3, EG666266, LOC670358, Bmp2k, Paqr3, LOC100040598, EG433923, EG666293
Downstream geneC80008, Gk2, Antxr2, EG435856, LOC666315, LOC666320, LOC666326, Prdm8, Fgf5, 1700007G11Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069A07.bB6Ng01-069A07.g
ACCDH887445DH887446
length1,1311,153
definitionDH887445|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A07, 5' end.DH887446|Mus musculus domesticus DNA, BAC clone: B6Ng01-069A07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatcgagtaggtattccttatgcatctccgtctttagagttgcc
catttgtaaaagcaaaggctcctagggaaatgcacttccttgccctcaac
agctctggaaaactccttcccagcgaactgtgggtcatttcactctttgc
accagagaagctgtgctgggaaaacagtaacagctggaacaattaagagg
caaactttatatttttaaatttactttttattgcgttattttatgtttat
gggtattttgcctgcatgtatgtctgtgcaccatgtgcatgcctggtacc
tgtggaggtcaaaaggtgtcagactcccagaactagatttagagatggtt
gtaaactgttaatgtgtgtgctggaaattgaacttgagtcctctggaaga
acaaccagtgctcttaatcaccgaaccatctctctaattccaacctgcca
agattttgtatgagagggttcatccccttaacttgtctataaacaagcag
aggatgagctgtgtctgttcgctagttctgctgagacaggagatgtccag
tctcccctttctagatgccacaaaacccagatatcagagctttgcataaa
tgcttttcagaggctcctcagccttgcaagacaagcttctcccaggacct
tcccacggtctttcttttccattcacctgtatctctgtgttaatttgctt
ttcttgaaggatctcggtcatatatgaccaatgctatcccagtgactcat
cctcatgacttcatttttaattagttctttaagattacattctgaggtaa
tgggctcagaaatgcagcctgggtgggtataagtcagcccatagcatgaa
cattgccttattgcttttcaacaacagtaccattacaaatggcattgccg
ctctttcttctactttaaaataatggacctcttttaaaccatagaacatc
tacatacataagtataaatcttgttggcatttaattttctccttggaaat
cttgtttccatgcagtgccgaagattcctgggagtctatttcgttattgc
tcttatgaaagcagcttgttcaatgagcccacatattttgttagttcatc
aagaaagcaaggaagaattagctggtgatca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcccgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatatactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggatcacagggctccca
atggaggagctagagaaagtacccaagagctaagggatctcaccctatag
gtggacacattatgaactaaccagtaccctgagctctgactctagctgca
tatgttcaaaggatggctagtcgcatcactgaaggaagtcaatggacacc
cagaactttgtgtgctcgttaaagggacgccaggcaaaggggggagtgtg
ggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_97800451_97801583
seq2: B6Ng01-069A07.b_44_1174

seq1  GAATTCCATCGAGTAGGTATTCCTTATGCATCTCCGTCTTTAGAGTTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCGAGTAGGTATTCCTTATGCATCTCCGTCTTTAGAGTTGCC  50

seq1  CATTTGTAAAAGCAAAGGCTCCTAGGGAAATGCACTTCCTTGCCCTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTAAAAGCAAAGGCTCCTAGGGAAATGCACTTCCTTGCCCTCAAC  100

seq1  AGCTCTGGAAAACTCCTTCCCAGCGAACTGTGGGTCATTTCACTCTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGGAAAACTCCTTCCCAGCGAACTGTGGGTCATTTCACTCTTTGC  150

seq1  ACCAGAGAAGCTGTGCTGGGAAAACAGTAACAGCTGGAACAATTAAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAGAAGCTGTGCTGGGAAAACAGTAACAGCTGGAACAATTAAGAGG  200

seq1  CAAACTTTATATTTTTAAATTTACTTTTTATTGCGTTATTTTATGTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTTTATATTTTTAAATTTACTTTTTATTGCGTTATTTTATGTTTAT  250

seq1  GGGTATTTTGCCTGCATGTATGTCTGTGCACCATGTGCATGCCTGGTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTTTGCCTGCATGTATGTCTGTGCACCATGTGCATGCCTGGTACC  300

seq1  TGTGGAGGTCAAAAGGTGTCAGACTCCCAGAACTAGATTTAGAGATGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGGTCAAAAGGTGTCAGACTCCCAGAACTAGATTTAGAGATGGTT  350

seq1  GTAAACTGTTAATGTGTGTGCTGGAAATTGAACTTGAGTCCTCTGGAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAACTGTTAATGTGTGTGCTGGAAATTGAACTTGAGTCCTCTGGAAGA  400

seq1  ACAACCAGTGCTCTTAATCACCGAACCATCTCTCTAATTCCAACCTGCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCAGTGCTCTTAATCACCGAACCATCTCTCTAATTCCAACCTGCCA  450

seq1  AGATTTTGTATGAGAGGGTTCATCCCCTTAACTTGTCTATAAACAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTTGTATGAGAGGGTTCATCCCCTTAACTTGTCTATAAACAAGCAG  500

seq1  AGGATGAGCTGTGTCTGTTCGCTAGTTCTGCTGAGACAGGAGATGTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGAGCTGTGTCTGTTCGCTAGTTCTGCTGAGACAGGAGATGTCCAG  550

seq1  TCTCCCCTTTCTAGATGCCACAAAACCCAGATATCAGAGCTTTGCATAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCTTTCTAGATGCCACAAAACCCAGATATCAGAGCTTTGCATAAA  600

seq1  TGCTTTTCAGAGGCTCCTCAGCCTTGCAAGACAAGCTTCTCCCAGGACCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTTCAGAGGCTCCTCAGCCTTGCAAGACAAGCTTCTCCCAGGACCT  650

seq1  TCCCACGGTCTTTCTTTTCCATTCACCTGTATCTCTGTGTTAATTTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGGTCTTTCTTTTCCATTCACCTGTATCTCTGTGTTAATTTGCTT  700

seq1  TTCTTGAAGGATCTCGGTCATATATGACCAATGCTATCCCAGTGACTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAAGGATCTCGGTCATATATGACCAATGCTATCCCAGTGACTCAT  750

seq1  CCTCATGACTTCATTTTTAATTAGTTCTTTAAGATTACATTCTGAGGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATGACTTCATTTTTAATTAGTTCTTTAAGATTACATTCTGAGGTAA  800

seq1  TGGGCTCAGAAATGCAGCCTGGGTGGGTATAAGTCAGCCCATAGCATGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCTCAGAAATGCAGCCTGGGTGGGTATAAGTCAGCCCATAGCATGAA  850

seq1  CATTGCCTTATTGCTTTTCAACAACAGTACCATTACAAATGGCATTGCCG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTTATTGCTTTTCAACAACAGTACCATTACAAATGGCATTGCCG  900

seq1  CTCTTTCTTCTACTTTAAAAATAATAGGACCTCTTTTAAACCATAGAACA  950
      |||||||||||||||| |||||||| ||||||||||||||||||||||||
seq2  CTCTTTCTTCTACTTT-AAAATAAT-GGACCTCTTTTAAACCATAGAACA  948

seq1  TCTACATACATAAGTATAAATCTTGTTGGCATTTTAATTTTCTCCTTGGA  1000
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCTACATACATAAGTATAAATCTTGTTGGCA-TTTAATTTTCTCCTTGGA  997

seq1  AATCTTGTTTCCCATGCAGTGCCGAAGATTCCT-GGAGTCTATTTCGTTA  1049
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  AATCTTGTTT-CCATGCAGTGCCGAAGATTCCTGGGAGTCTATTTCGTTA  1046

seq1  TTGCTCTTATGAAAGCAGC-TGTTCAATGAGCGCAACATATTTTGTTAGT  1098
      ||||||||||||||||||| |||||||||||| | |||||||||||||||
seq2  TTGCTCTTATGAAAGCAGCTTGTTCAATGAGC-CCACATATTTTGTTAGT  1095

seq1  TCATCAAG-AAGCAGAGGAAGATTATGCT-GTGATCA  1133
      |||||||| ||||| ||||||| |  ||| |||||||
seq2  TCATCAAGAAAGCA-AGGAAGAATTAGCTGGTGATCA  1131