BAC Information

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BAC

Clone NameB6Ng01-069N15
Chromosome5 (Build37)
Map Location 18,624,198 - 18,625,018
singlet/doubletsinglet
Overlap genenone
Upstream geneGnai1, LOC100041818, LOC668167
Downstream gene4921504A21Rik, Magi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069N15.bB6Ng01-069N15.g
ACCDH888027DH888028
length1,176821
definitionDH888027|Mus musculus domesticus DNA, BAC clone: B6Ng01-069N15, 5' end.DH888028|Mus musculus domesticus DNA, BAC clone: B6Ng01-069N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactggtcttaccacattccccaccatcctgaagcagctggtctg
atcgaaagatggaatggccttttgaagacacagttacagcgccaattagg
tggtaacagcttggaaggctggggtagagttcttcagaaggcagtatatg
ctttgaatcagcgctcaatatatggtacagtttcacccatagccaggatt
catgggtccaggaatcaaggggtggaaaatggaatagttccacttactat
cactcctagtgaccctctaggaaaatttttgcttcctgtccccataactc
taggttctgctggcttagaagttttggctccagagaggggagtgctccta
ccaggagctacaacaaacattccattgaactggaagctcagacttccccc
tggtcattttgggcttcttatgcccttaaaccaacaggctaaaaaaggaa
taacagtgttaggaggggtgatagatccagattaccatggagaaattgga
ttacctcttcacaatggtggtaagcaagattatgtctggagtgtaggaga
tcccttagggcgtctcttagtactaccatgtcctgtgattaaagtcaatg
ggaaactacaacagcctaatccaagcaggatgacaaaggacacagaccca
tcaggaatgaaggtatgggtcaatcctccaggaaaagagccaagacctgc
tgaggtgctggctgaaggtgaaggaaatacagaatgggtagtagaggaag
gtagttataaataccaattaaggccacgtaaccagttgcagaaacaagga
ttataaagtaatatgaatgccccattgtaatttacaaatacgtttgcaat
tgtacgagggatagtatatcatgttaggtgtattcacaccttgttatgtt
tcatgtgaacatgagatgttatttgtgtcagtgacaaggcgtggatagta
gaggctattcatggccgtcaacttgccgatatttgaatgaactacaaacc
ggaagtagtagatcgccatgagcttatctggagtttcgaaatctatcttg
gatctggttggagagcttattcgtgttggctatgtattcctagatgaatc
caatgtaggacaccacttatcggcttacgtcgctgaacaatataagaact
ggagaaggagctctctctagctctgt
gaattctccctgtccatgctgcttattgagattgaggtcatggatagata
gcatcatcatgatttggatgttaagtttcagatacattttgaatcaaaat
gaaaattaatactttatttcttgttcagtgctttgtactgactttagaac
tctcactacataatacagttgcataaattttgtccttaataatggatctt
tatcatggttttaaaatgtcttcttatcactggtgagtttaatatgtgct
cacaaatttggggtaactttgctattgtaatacaacattattttattcat
cttaaatactctatgtttatacaagcagctaatgagaaatccctgcttat
gaagattcctaacatgcttcatttcccattcattttttgatatacatttt
gtactgagtttaatgtttaagttgtagaaataattttcttcatttactga
gggacatttgggatgatacaataaagtgttacagcagatatttaatattc
tgttcttatcttcataccaatctcatacatatatgtaaatatttatgcat
ttgaaggatcttgagaaacactctcatatagaaaaaaactgtatctactg
ataagaaaatgaaaatatgagaaaaatcttcaaatgtaaaagatgttcaa
gtgatactagatattagctggagttcaggggttttttttttcattttttt
attaggtatttagctcatttacatttccaatgctataccaaaagtcccgc
agacccacgcacacactctccttttccgggatccaccccctttttggctt
cgaattctcctgtactggggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_18624198_18625018
seq2: B6Ng01-069N15.g_69_889 (reverse)

seq1  GCCCCAGTACAGGGAAATGCCAGGGCCAAAAAGGGGGAGTGGGT--GGGT  48
      |||||||||||||  ||| | |  ||||||||||||  |||| |   || 
seq2  GCCCCAGTACAGGAGAATTCGA-AGCCAAAAAGGGG--GTGGATCCCGGA  47

seq1  AGGGGAGTGGGGGTGGGTGGGTATGGGGGACTTTTGGTATAGCATTGGAA  98
      |  |||| | | ||| |||||| || ||||||||||||||||||||||||
seq2  AAAGGAGAGTGTGTGCGTGGGTCTGCGGGACTTTTGGTATAGCATTGGAA  97

seq1  ATGTAAATGAGCTAAATACCTAAT-AAAAAATGAAAAAAAAAACCCCTGA  147
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  ATGTAAATGAGCTAAATACCTAATAAAAAAATGAAAAAAAAAACCCCTGA  147

seq1  ACTCCAGCTAATATCTAGTATCACTTGAACATCTTTTACATTTGAAGATT  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGCTAATATCTAGTATCACTTGAACATCTTTTACATTTGAAGATT  197

seq1  TTTCTCATATTTTCATTTTCTTATCAGTAGATACAGTTTTTTTCTATATG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCATATTTTCATTTTCTTATCAGTAGATACAGTTTTTTTCTATATG  247

seq1  AGAGTGTTTCTCAAGATCCTTCAAATGCATAAATATTTACATATATGTAT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTTTCTCAAGATCCTTCAAATGCATAAATATTTACATATATGTAT  297

seq1  GAGATTGGTATGAAGATAAGAACAGAATATTAAATATCTGCTGTAACACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGGTATGAAGATAAGAACAGAATATTAAATATCTGCTGTAACACT  347

seq1  TTATTGTATCATCCCAAATGTCCCTCAGTAAATGAAGAAAATTATTTCTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTATCATCCCAAATGTCCCTCAGTAAATGAAGAAAATTATTTCTA  397

seq1  CAACTTAAACATTAAACTCAGTACAAAATGTATATCAAAAAATGAATGGG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTAAACATTAAACTCAGTACAAAATGTATATCAAAAAATGAATGGG  447

seq1  AAATGAAGCATGTTAGGAATCTTCATAAGCAGGGATTTCTCATTAGCTGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGCATGTTAGGAATCTTCATAAGCAGGGATTTCTCATTAGCTGC  497

seq1  TTGTATAAACATAGAGTATTTAAGATGAATAAAATAATGTTGTATTACAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAACATAGAGTATTTAAGATGAATAAAATAATGTTGTATTACAA  547

seq1  TAGCAAAGTTACCCCAAATTTGTGAGCACATATTAAACTCACCAGTGATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAGTTACCCCAAATTTGTGAGCACATATTAAACTCACCAGTGATA  597

seq1  AGAAGACATTTTAAAACCATGATAAAGATCCATTATTAAGGACAAAATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGACATTTTAAAACCATGATAAAGATCCATTATTAAGGACAAAATTT  647

seq1  ATGCAACTGTATTATGTAGTGAGAGTTCTAAAGTCAGTACAAAGCACTGA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAACTGTATTATGTAGTGAGAGTTCTAAAGTCAGTACAAAGCACTGA  697

seq1  ACAAGAAATAAAGTATTAATTTTCATTTTGATTCAAAATGTATCTGAAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAATAAAGTATTAATTTTCATTTTGATTCAAAATGTATCTGAAAC  747

seq1  TTAACATCCAAATCATGCTGATGCTATCTATCCATGACCTCAATCTCAAT  797
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTAACATCCAAATCATGATGATGCTATCTATCCATGACCTCAATCTCAAT  797

seq1  AAGCAGCATGGACAGGGAGAATTC  821
      ||||||||||||||||||||||||
seq2  AAGCAGCATGGACAGGGAGAATTC  821