BAC Information

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BAC

Clone NameB6Ng01-070J14
Chromosome5 (Build37)
Map Location 144,323,459 - 144,444,067
singlet/doubletdoublet
Overlap gene2810453I06Rik, Pscd3
Upstream geneLOC100038984, LOC100042525, LOC100038888, Zfp469, LOC666788, Fbxl18, D430018E03Rik, LOC100042558, Actb, Fscn1, 2810055G22Rik, LOC667809, Olfr718-ps1, LOC640324, LOC100042605, Rbak, 4933411G11Rik, Spdyb, Zfp12, Zfp316, Gm792, E130309D02Rik, Zdhhc4, Grid2ip, Kdelr2, LOC231869, LOC670671, Daglb, Rac1
Downstream geneUsp42, Eif2ak1, 4921520G13Rik, Jtv1, Pms2, 4930526H21Rik, AU022870, Ocm, Lmtk2, Bhlhb8, 2210010N04Rik, Bri3, Baiap2l1, 4930568B11Rik, Nptx2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070J14.bB6Ng01-070J14.g
ACCDH888556DH888557
length1,036922
definitionDH888556|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J14, 5' end.DH888557|Mus musculus domesticus DNA, BAC clone: B6Ng01-070J14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,443,036 - 144,444,067)(144,323,459 - 144,324,380)
sequence
gaattctttactgagactccttttgcaggagattctgtattatatcaagt
tggcaattaaaactacccacggataggctgaagagatgatcctgaggtta
agagcgctggctgttcttccagaggacctaggttcaatctgcaacaccca
catggcagctaacgactttaactccggctcaaggggatccaacatcctca
gacagacatacatgcaggaaaaacatcaattcacataaaacaaacaaatc
atttaaaaaaagaaaaactaaccacataaatacatgtcataacatgatca
gaacaatgaatgcagaatgtgtaataagtacatcctgtaaggtgtggagg
aaggagaggagcagagcgcctgttacattgctacctcttcttcctctgct
cgctccacaccgaaacacgaatggtgccttagtggtgtccttaggtaacc
ctctatgccaaaatgctactaaggaaacggttactgctctccaaataaca
gagggctataaaatacctggacccctcaaaacaccatgaggacagtcatt
actagccctattttaaaactgacgccaagagagatcgaatgatttttccc
tacgaaagagatattgaagaaagaatgggggtggaaagatggctcagcac
ttcagagcacttggtgctctatcacatgctcagagtgtgatcctagtacc
tacatcacgcagttcacaagtgtctgtgactgtgattccaagggccaaat
atttctttagtgagtcactgaatggatacacaccccccgctgcatcgatt
gatggatagatcgacttgacagacagacaagcttaaatttcctcatcgtc
actggaaccagtgtcttcctactagcattgcaaaatgccagcttcatcat
ggagctgcctccatccctgctatgcagtacttaggtgctgatgctatgtg
ctacctcaccccagaggcttctaccgaccctctcctaagtcttactgacc
tgagctgtgtcaggcttgctgtctcagctcagacca
gaattcaaggccacctatggcaatggacaaagcttctctctgtctggctc
ctgtgcagctctgtggccccactctgcaaggacctggtgtttggtgatat
tttgcatgtgtgtgactgttttactaaccctctgtcacagaattctcatt
tgattatcttttccaggttcacattgagatccactgaaggccatccttga
ctgataggcctcaccccgactccctgcatcaaagggcacagagcatgaag
gctgggagagggaccctgggtgtctgcctggccaaactgtcgcgaggagg
tgacccggacaaactagcttgtggccttaaaaaaagaactcagaacacga
acccccccccatccgttgtgccttcttggacagaccatcctgtagcagat
atccatggaaagtcacgggccaccggggcagcagcctcataaaagaatca
tggtcacatcaaggccaccctcctgcatcatggtggcttcaaagtgcttc
agtctctgaagggatcagtggggaggagttcatccccagcagcctccctc
ggctaggctgtggctctgtcccctgctcctctataagagcaactatccgg
gatgtcccatggcatcggggatgcactaggaagtgactggaaggaagaga
gcccagagccacagacgaccgaggacaatacctcaaaggagagtcctggg
tgtcatgacggtcatgccgtcatataccgagggaagtgtgactcctacga
ggagaaccaccgaaagctggccccgctgagctaggcacctgttcacaact
gtgtcacatataactggatctgagccggctgccatatgcttaccactatt
atccacgtactaccagtatgcgatctgaggtgtgtgtaccgtgaccgtat
cagtcccgggctttcagaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_144443036_144444067
seq2: B6Ng01-070J14.b_41_1076 (reverse)

seq1  TGGTCTGAGCTGAGACCGGCAACCTGAGACAGCTCAGGCTAGTGAGACTT  50
      |||||||||||||||| |  | ||||| ||||||||||  ||| ||||||
seq2  TGGTCTGAGCTGAGACAGCAAGCCTGACACAGCTCAGGTCAGTAAGACTT  50

seq1  AGGAGAGGCTCTGTAGAAGCCTCTGGGGTGAGGAAGCACATAGCCTCAGC  100
      |||||||| || ||||||||||||||||||||| |||||||||| |||||
seq2  AGGAGAGGGTCGGTAGAAGCCTCTGGGGTGAGGTAGCACATAGCATCAGC  100

seq1  ACC-AAGTACTGCATAGCAGGGCTGGAGGCAGCTCCATGATGAAGCTGGC  149
      ||| |||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACCTAAGTACTGCATAGCAGGGATGGAGGCAGCTCCATGATGAAGCTGGC  150

seq1  ACTTTGCAA-GGTAGAAGGAAGACACTGGTTCCAGGGACCTTGTGGAAAT  198
      | ||||||| | ||| ||||||||||||||||||| |||  || ||||||
seq2  ATTTTGCAATGCTAGTAGGAAGACACTGGTTCCAGTGACGATGAGGAAAT  200

seq1  CTAAGTTTGTCTGTCTGTC-TGTCTATCTATCTATCTATCTATCTATCTA  247
       |||| |||||||||||||  ||| ||||||| ||| ||| ||  | |  
seq2  TTAAGCTTGTCTGTCTGTCAAGTCGATCTATCCATCAATCGATGCAGCGG  250

seq1  GGTGTGTGTATCCATTCAGTGACTC-CTAAAGAAATATTTGGCCCTTGGA  296
      || |||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGGGTGTGTATCCATTCAGTGACTCACTAAAGAAATATTTGGCCCTTGGA  300

seq1  ATCACAGTCACAGACACTTGTGAACTGCCTGATGTAGGTACTGGGATCAA  346
      |||||||||||||||||||||||||||| ||||||||||||| |||||| 
seq2  ATCACAGTCACAGACACTTGTGAACTGCGTGATGTAGGTACTAGGATCAC  350

seq1  ACTCTGAGCCTCTGATAGAGCACCAAGTGCTCTTAAGTGCTGAGCCATCT  396
      ||||||||| | ||||||||||||||||||||| ||||||||||||||||
seq2  ACTCTGAGCATGTGATAGAGCACCAAGTGCTCTGAAGTGCTGAGCCATCT  400

seq1  TTCCACCCCCATTCTTTCTTCAATATCTCTTTCCTAGGGAAAAATCATTC  446
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTCCACCCCCATTCTTTCTTCAATATCTCTTTCGTAGGGAAAAATCATTC  450

seq1  GATCTCTCTTGGCCTCAGTTTTAAAATAGGGCTAGTAATGACTGTCCTCA  496
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GATCTCTCTTGGCGTCAGTTTTAAAATAGGGCTAGTAATGACTGTCCTCA  500

seq1  TGGTGTTTTGAGGGGTCCAGGTATTTTATAGCCCTCTGTTATTTGGAGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTTGAGGGGTCCAGGTATTTTATAGCCCTCTGTTATTTGGAGAG  550

seq1  CAGTAACCGTTTCCTTAGTAGCATTTTGGCATAGAGGGTTACCTAAGGAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAACCGTTTCCTTAGTAGCATTTTGGCATAGAGGGTTACCTAAGGAC  600

seq1  ACCACTAAGGCACCATTCGTGTTTCGGTGTGGAGCGAGCAGAGGAAGAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTAAGGCACCATTCGTGTTTCGGTGTGGAGCGAGCAGAGGAAGAAG  650

seq1  AGGTAGCAATGTAACAGGCGCTCTGCTCCTCTCCTTCCTCCACACCTTAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGCAATGTAACAGGCGCTCTGCTCCTCTCCTTCCTCCACACCTTAC  700

seq1  AGGATGTACTTATTACACATTCTGCATTCATTGTTCTGATCATGTTATGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGTACTTATTACACATTCTGCATTCATTGTTCTGATCATGTTATGA  750

seq1  CATGTATTTATGTGGTTAGTTTTTCTTTTTTTAAATGATTTGTTTGTTTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATTTATGTGGTTAGTTTTTCTTTTTTTAAATGATTTGTTTGTTTT  800

seq1  ATGTGAATTGATGTTTTTCCTGCATGTATGTCTGTCTGAGGATGTTGGAT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAATTGATGTTTTTCCTGCATGTATGTCTGTCTGAGGATGTTGGAT  850

seq1  CCCCTTGAGCTGGAGTTAAAGTTGTTAGCTGCCATGTGGGTGTTGCAGAT  896
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  CCCCTTGAGCCGGAGTTAAAGTCGTTAGCTGCCATGTGGGTGTTGCAGAT  900

seq1  TGAACCTAGGTCCTCTGGAAGAACAGCCAGCGCTCTTAACCTCAGGATCA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTAGGTCCTCTGGAAGAACAGCCAGCGCTCTTAACCTCAGGATCA  950

seq1  TCTCTTCAGCCTATCCGTGGGTAGTTTTAATTGCCAACTTGATATAATAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTCAGCCTATCCGTGGGTAGTTTTAATTGCCAACTTGATATAATAC  1000

seq1  AGAATCTCCTGCAAAAGGAGTCTCAGTAAAGAATTC  1032
      ||||||||||||||||||||||||||||||||||||
seq2  AGAATCTCCTGCAAAAGGAGTCTCAGTAAAGAATTC  1036

seq1: chr5_144323459_144324380
seq2: B6Ng01-070J14.g_65_986

seq1  GAATTCAGGGCGACCTATGGCAGTGGACAGAGCTTCTCGCTGTCTGGCTC  50
      ||||||| ||| |||||||||| |||||| |||||||| |||||||||||
seq2  GAATTCAAGGCCACCTATGGCAATGGACAAAGCTTCTCTCTGTCTGGCTC  50

seq1  CTGTGCAGCTCTGTGGCCCCACTCTGCAAGGACCTGGTGTTTGGTGATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGCAGCTCTGTGGCCCCACTCTGCAAGGACCTGGTGTTTGGTGATAT  100

seq1  TTTGCATGTGTGTGACTGTTTTACTAACCCTCTGTCACAGAATTCTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATGTGTGTGACTGTTTTACTAACCCTCTGTCACAGAATTCTCATT  150

seq1  TGATTATCTTTTCCAGGTTCACATTGAGATCCACTGAAGGCCATCCTTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATCTTTTCCAGGTTCACATTGAGATCCACTGAAGGCCATCCTTGA  200

seq1  CTGATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAGGCCTCACCCCGACTCCCTGCATCAAAGGGCACAGAGCATGAAG  250

seq1  GCTGGGAGAGGGACCCTGGGTGTCTGCCTGGCCAAACAGTCACAAGGAGG  300
      ||||||||||||||||||||||||||||||||||||| ||| | ||||||
seq2  GCTGGGAGAGGGACCCTGGGTGTCTGCCTGGCCAAACTGTCGCGAGGAGG  300

seq1  TGACCCGGACAAACTAGCATGTGGCCTTAAGAAAAGAAGTCAGAAGAGGA  350
      |||||||||||||||||| ||||||||||| ||||||| |||||| | ||
seq2  TGACCCGGACAAACTAGCTTGTGGCCTTAAAAAAAGAACTCAGAACACGA  350

seq1  ACCCCAGCCCATCAGTTGTGCCTTCTTGGACAGACCAGCCTGTAGCAGAT  400
      |||||  |||||| ||||||||||||||||||||||| ||||||||||||
seq2  ACCCCCCCCCATCCGTTGTGCCTTCTTGGACAGACCATCCTGTAGCAGAT  400

seq1  AGCCATGGAAAGTCACGGGCCACGGGGGCAGCAGCCTCAGAAATGAAGCA  450
      | ||||||||||||||||||||| ||||||||||||||| ||| ||| ||
seq2  ATCCATGGAAAGTCACGGGCCACCGGGGCAGCAGCCTCATAAAAGAATCA  450

seq1  TGGTCAGAGCAAGGCCAGCCTCCTGCATCATGGTGGCTTCAAAGTGCTTC  500
      |||||| | |||||||| ||||||||||||||||||||||||||||||||
seq2  TGGTCACATCAAGGCCACCCTCCTGCATCATGGTGGCTTCAAAGTGCTTC  500

seq1  AGTCTCTGAAGGGATCAGTGGGGAGGAGTTCAGCCCCAGCAGCCTCCCTC  550
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGTCTCTGAAGGGATCAGTGGGGAGGAGTTCATCCCCAGCAGCCTCCCTC  550

seq1  GGCAAGGCTGTGGCTCTGTCCCCTGCTCCTTCAGAAGAGCAACTAGCCGG  600
      ||| ||||||||||||||||||||||||||  | ||||||||||| ||||
seq2  GGCTAGGCTGTGGCTCTGTCCCCTGCTCCTCTATAAGAGCAACTATCCGG  600

seq1  GATGTCCCATGGCATCGGGGATGCACTAGGAAGTGACTGGCCAGGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  GATGTCCCATGGCATCGGGGATGCACTAGGAAGTGACTGG-AAGGAAGAG  649

seq1  AGCCCAGAGCCACAGACAACCGTGGACAGTACCTCAAAGGAGAGTCCTGG  700
      ||||||||||||||||| |||| ||||| |||||||||||||||||||||
seq2  AGCCCAGAGCCACAGACGACCGAGGACAATACCTCAAAGGAGAGTCCTGG  699

seq1  GTGTCAGGACGGCCAGGCCATCCAAAACTGAGGGAAGTGGGATTCCTAAG  750
      |||||| ||||| || ||| ||  | || |||||||||| || ||||| |
seq2  GTGTCATGACGGTCATGCCGTCATATACCGAGGGAAGTGTGACTCCTACG  749

seq1  AGGTGAACCACCAAGTGCTGGCCCCAAGGGGCTAGGCACCTGGTCAGAAC  800
      ||| |||||||| |  |||||||||   | |||||||||||| ||| |||
seq2  AGGAGAACCACCGAAAGCTGGCCCCGCTGAGCTAGGCACCTGTTCACAAC  799

seq1  TGTCTCACCGATACTTTGAGCTGGGCCAGCTGCCATATGCTTACCCCTAT  850
      ||| ||||  |||  | || ||| ||| ||||||||||||||||| ||||
seq2  TGTGTCACATATAACTGGATCTGAGCCGGCTGCCATATGCTTACCACTAT  849

seq1  TAT-AAAGTTCTCCCAGAAGGCGAGCTGAGGTGTGTGTCCCTTGACCGTT  899
      |||  | || || |||| | |||| ||||||||||||| || ||||||| 
seq2  TATCCACGTACTACCAGTATGCGATCTGAGGTGTGTGTACCGTGACCGTA  899

seq1  TCAATCCCGGGCTTTCAGAGGAA  922
      ||| |||||||||||||||||||
seq2  TCAGTCCCGGGCTTTCAGAGGAA  922