BAC Information

Click to search

BAC

Clone NameB6Ng01-070M10
Chromosome5 (Build37)
Map Location 81,984,448 - 81,984,592
singlet/doubletsinglet
Overlap geneLphn3
Upstream geneLOC100039506, LOC100039384
Downstream geneEG433912
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070M10.g
ACCDH888670
length185
definitionDH888670|Mus musculus domesticus DNA, BAC clone: B6Ng01-070M10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tgttttcccgccctgctcacgtgtgcttgctgtgagagagagagagagat
tggttggatggatgggtttagagagagagagaaaggagagagtgagagaa
gagagagaggagagagagaggagagagagaagagagagaggagagagagg
agagagagagagaaaggagagagtgagagaagaga
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_81984448_81984592
seq2: B6Ng01-070M10.g_137_254 (reverse)

seq1  TCTCTCCCTCTCTCTCTCTCTCCCTCTCTCCCTCTCTCTCTCTCTCTC-C  49
      |||||   |||||| |||||| ||| |||| ||||||||| ||||||| |
seq2  TCTCT---TCTCTCACTCTCT-CCTTTCTCTCTCTCTCTC-CTCTCTCTC  45

seq1  CTCCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  99
      ||| |||||| |||||||||| ||||||||||| |||||||||| |||||
seq2  CTCTCTCTCT-TCTCTCTCTC-CTCTCTCTCTC-CTCTCTCTCT-TCTCT  91

seq1  CACACACACACACACACACACACACACTCTCTCTCTCTCTCTCTAA  145
      ||| | | |                   || |||||||||||||||
seq2  CACTCTCTC-------------------CTTTCTCTCTCTCTCTAA  118


| Home | SequenceCutter | Blast | Download |