BAC Information

Click to search

BAC

Clone NameB6Ng01-071F02
Chromosome5 (Build37)
Map Location 94,799,326 - 94,800,180
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC632115, EG330129, LOC100040885, LOC666064, LOC100040909, C87414, LOC666075, LOC666077, LOC666081, EG665802, LOC100040408, LOC100040981, EG622719, LOC100041003, BC061212, EG622744, LOC100041032, LOC100041042, LOC624421
Downstream geneAA792892, LOC665521, LOC665551, LOC100041102, LOC665560, LOC100041115, LOC624507, LOC621203, LOC100041153, LOC665499, LOC624698, LOC100041179, LOC624655, LOC100041166, LOC665469, LOC622894, EG666121, LOC666125, EG666133, LOC100041296, LOC100041253, LOC100041264, EG624049
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071F02.bB6Ng01-071F02.g
ACCDH889051DH889052
length1,2121,162
definitionDH889051|Mus musculus domesticus DNA, BAC clone: B6Ng01-071F02, 5' end.DH889052|Mus musculus domesticus DNA, BAC clone: B6Ng01-071F02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagacccgtacctaaacaaattaaaagcaatttacagcaaacca
gtagccaacatcaaactaaatggagagaacctggaagcaatcccactaaa
atcagggactagacaaggctacccatgctttcagtacctattcaatgtag
ggctcaaagttttagccagagctattggacaatggaaggaggtaaaaggg
atacaaattggaaaggaagatgtcaaaatatcgccatttgcagatgatat
gatagtatactgaagtgatcaaatagggaaaactattttcaacaataaaa
taacttctggcggaatcactatctcttacctcaagcttcattacagatca
atagtaataaaaatatattgtattcatacagaagaatggcacaaagatca
atagaatagaattgaagtcacggaaatgaaccgatgcacctaagatcact
tgatttttgggaaaggatctaaaactattcagtggaaaaaggacaacatt
ttcgacaaatggtgctggttcaactggcagtcaggatgtaagagaataca
aattgatccattcttatctccttgtacaaagctcaagtccaagtggataa
aggacctccacataaaacatgatacactgaacctcatagaggaaaaagta
gggaacacataggcataggggaaattttcctgcacagaataccagtggct
tatactttaagatcaagaatggacaaatgggtactcataaaattgcaaag
ctctgaaaggcaaaggacactttaggacaaaatggcaaacaacagattag
gataaaaatgtttaccaatcctacatctgatagagggctaatatccaata
tatacaaaggactcaagaagtttgactccaaagaattaaataaccctatt
aaaaatgggtaatagtctctagatgatccatccttttatctcagctccaa
actttgtctctgtaactcctgccatgggtgttttgttcccaattctaaga
agcgcaaagtgtccacactttggtctcgttcttcttgagtttcatgtgtt
ttgcaaactgtacttatatctgatatctattttctgggctattccactta
tcatgagtacttcataatcctttggatggtacccaccggatagcctcagg
tcacatgcaggattcatcatcgttagcgatgaccatgtcattgacccatt
ttatttgacatc
gaattctcagggcctgtgatggtctatactgcatggcatatcagtgtaga
gaaaagaaatagacacaagctccagtcccaaacccagaaactattaataa
caaacgaaaaagtagttctctcaaatgaagtctccctgaggatacagatc
ccattcagatgggcaggtctgcaggccaacacaaaatgaactcaggggcc
tctttggaggtcctaggtctcataatgttttgtcaggccttttatctttt
ttttttttttttgcttatttatcttaaaacccactagctgttctcttcag
ggtcacaccctagcacactccatctaggtgccttcttaccatctcctcta
agtgagtggaggctccctgtgtatttccacacccttgtactttaagtatt
ttcaaggcagggcatatcctctctcactgagtccagacaaagcagctcaa
atagaagaacatgtcccacatacaggcaacagattttgaaggaggcctcc
actccagctgttaggggacccacatgaagaccaagctgtacatctgtgtg
gggaggcctattccaagcccatgtgtgttctttggttgggggttcagttt
ctgagagcatcaaaggtcccagttgattgactctgttggacttcctacag
tgtctttatcacctttgggacctttgctcatatattatggctaccaatgt
tgggtttttattggaatctactgtgtgtgaacatgtcctgcatctatatg
aatttctcatggtttttcaatggctctttttgctctatatctttattttg
ttatatcccaatatgtagcagttacctaggtcttatattccatctaggtc
ttcatattttacctggatcccaagaatgtgttggtggtctagaaaccatg
agatactgaagtgatttctctccttacatctgtgtgtctcatagctgaat
tcagtttggcaacaagtgccattgaccattgagaatatctcaaagtctac
tagctcctaaaatttttttctaaaaacactatttttttttcattttttgt
ttttagaattttcaagacgattcctgtttaacagatcttgactgtcagaa
cctactctgtgtattgcatattctggttgtccacttggacaattgatgac
tacaatcggaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_94799326_94800180
seq2: B6Ng01-071F02.g_385_1227

seq1  CCATCTAGGTGCCTTCTTACCATCTCCTCTAAGTGAGTGGAGGCTCCCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTAGGTGCCTTCTTACCATCTCCTCTAAGTGAGTGGAGGCTCCCTG  50

seq1  TGTATTTCCACACCCTTGTACTTTAAGTATTTTCAAGGCAGGGCATATCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCCACACCCTTGTACTTTAAGTATTTTCAAGGCAGGGCATATCC  100

seq1  TCTCTCACTGAGTCCAGACAAAGCAGCTCAAATAGAAGAACATGTCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCACTGAGTCCAGACAAAGCAGCTCAAATAGAAGAACATGTCCCAC  150

seq1  ATACAGGCAACAGATTTTGAAGGAGGCCTCCACTCCAGCTGTTAGGGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGCAACAGATTTTGAAGGAGGCCTCCACTCCAGCTGTTAGGGGAC  200

seq1  CCACATGAAGACCAAGCTGTACATCTGTGTGGGGAGGCCTATTCCAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGAAGACCAAGCTGTACATCTGTGTGGGGAGGCCTATTCCAAGCC  250

seq1  CATGTGTGTTCTTTGGTTGGGGGTTCAGTTTCTGAGAGCATCAAAGGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGTTCTTTGGTTGGGGGTTCAGTTTCTGAGAGCATCAAAGGTCC  300

seq1  CAGTTGATTGACTCTGTTGGACTTCCTACAGTGTCTTTATCACCTTTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGATTGACTCTGTTGGACTTCCTACAGTGTCTTTATCACCTTTGGG  350

seq1  ACCTTTGCTCATATATTATGGCTACCAATGTTGGGTTTTTATTGGAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTGCTCATATATTATGGCTACCAATGTTGGGTTTTTATTGGAATCT  400

seq1  ACTGTGTGTGAACATGTCCTGCATCTATATGAATTTCTCATGGTTTTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTGTGAACATGTCCTGCATCTATATGAATTTCTCATGGTTTTTCA  450

seq1  ATGGCTCTTTTTGCTCTATATCTTTATTTTGTTATATCCCAATATGTAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTTTTTGCTCTATATCTTTATTTTGTTATATCCCAATATGTAGC  500

seq1  AGTTACCTAGGTCTTATATTCCATCTAGGTCTTCATATTTTACCTGGATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACCTAGGTCTTATATTCCATCTAGGTCTTCATATTTTACCTGGATC  550

seq1  CCAAGAATGTGTTGGTGGTCTAGAAACCATGAGATACTGAAGTGATTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAATGTGTTGGTGGTCTAGAAACCATGAGATACTGAAGTGATTTCT  600

seq1  CTCCTTACATCTGTGTGTCTCATAGCTGAATTCAGGTTTGGCAACAAGTG  650
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTCCTTACATCTGTGTGTCTCATAGCTGAATTCA-GTTTGGCAACAAGTG  649

seq1  CCATTGACCATTGAG-ATATCTCAAAGTCTACTAGGCTCCCTAAAATTTT  699
      ||||||||||||||| |||||||||||||||||| ||| |||||||||||
seq2  CCATTGACCATTGAGAATATCTCAAAGTCTACTA-GCT-CCTAAAATTTT  697

seq1  TTTCTTAAAAACACTA-TTTTTTTTCATTTTTTGTTTTTAGATTTTTCAA  748
      |||| ||||||||||| ||||||||||||||||||||||||| |||||||
seq2  TTTC-TAAAAACACTATTTTTTTTTCATTTTTTGTTTTTAGAATTTTCAA  746

seq1  GACAGGGTTTCTGTTTAACAGATC-TGACTGGTCCAGAACTTACTCTGTG  797
      |||  | || |||||||||||||| ||||||   |||||| |||||||||
seq2  GAC--GATTCCTGTTTAACAGATCTTGACTG--TCAGAACCTACTCTGTG  792

seq1  TAGTGGCTATTCCTGGTTGTCAACTT-GACAATATTTGGAATGAACTACA  846
      || ||  |||| ||||||||| |||| |||||   |||  ||| ||||||
seq2  TATTGCATATT-CTGGTTGTCCACTTGGACAA---TTG--ATG-ACTACA  835

seq1  ATCCGGAAT  855
      || ||||||
seq2  AT-CGGAAT  843