BAC Information

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BAC

Clone NameB6Ng01-072H10
Chromosome5 (Build37)
Map Location 73,375,581 - 73,376,519
singlet/doubletsinglet
Overlap genenone
Upstream geneGabrb1, LOC666545, Commd8, Atp10d, Corin, Nfxl1, Zar1, EG545758, Cnga1, LOC384275, Npal1, Txk, Tec, Slain2
Downstream geneSlc10a4, LOC667127, Fryl, Ociad1, Ociad2, LOC667154, LOC100042205, C130090K23Rik, LOC627733, Dcun1d4, BC031901, Sgcb, Spata18
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072H10.bB6Ng01-072H10.g
ACCDH889876DH889877
length1,240936
definitionDH889876|Mus musculus domesticus DNA, BAC clone: B6Ng01-072H10, 5' end.DH889877|Mus musculus domesticus DNA, BAC clone: B6Ng01-072H10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcagcctcttgtgggtctaaacatccctcctttcccttcaagg
aatgcgctcagtatttcttataagtaaaagataaggacataaagcacgca
cttgctggtttattcgtggagatccttatccccgtagccgctgtaagtac
agacctatgtcttagtaccatgcgccatacgaaggcctgcctccctttcc
tccctgaaagctcttgcaatggcgtgagcccctgctggcccaccccctgt
gctccccactcccgagtggtcagtttgttatgttgatgggtatagatagc
cttgtgaatccttttatagattttgattattttccaattattgtagacaa
taggacaaatctatcctcctttggtcttggccagatatgaaagttaattg
tgttttattcaaatttctctcgacataactagtgaacaggcttatcttca
tgttgagaaagaaaaccgctctggcttccactttctttcatggtctggtg
gcctgtgcatttctatgaattgcctggcatgctcatgcactgctttggaa
acacacgtatgagaggtgcggtggccgggaaattgcttgtttgtttgttt
ggttggttgcttggtttggttttgagttgctcagtaaaagtactatttta
tatgaaaacttaatttcatgcattatttagcatttcaaaagcatcttatt
ttaagccatcgattaagaacattttaaatatttaaatatatgcactaagt
tttattttatatgctatcaacacttaaagtaggtactaaaagtatataat
ggagatttagaacaactagattgtgttttagaaattgattatatttaaaa
gctacaaaaaaaaaaccacctttctctttctaatctttaaaagtatttaa
gtttaggatacttccaaaataaagagaagagaaatttatatctgtgtatt
tttgatgcctgtgtaacatagaatagtttattctgggcaaacagtctgtt
cattttaagttgtcatgtgctataagctttggtatgtctcttctgttcag
cttcccatgtgtgagtagattcctgagtgagctgcataggtcatctcccc
atcagctgccgtcactagtcagccgtaggtcgcacctgaaagactccagt
ggatctgtactgctctgaagctcctcagctaacatgtccatgtccagtac
tgaagtcggctgagtgagactgagtcaaaatcgtctgaat
gaattcagattcacttggttgtcctcacgatgagtcaatgtgatattttc
atattaatcagaacaaagtgaggctacacgatgattaagtgtggtgcttt
ggtcagaatcttggaacaggagaagcaaattctgtattataaaaatgaaa
tttggctagtaaaaatgaccaacagccaggcagaggtggcacatgtctct
aatcccagcacccagggaggcgtcgggcagatctctgtgagttcaaaacc
agcttggtttggtttaaaaaaaaaaaaaaagtgagttccagaatgcagag
aaaccttttctctaaaacaaacaaacaaacaacaaccaaatcaaaaaatt
gtgcctgaagagctggctcaacagttaagagcactgactgctgctcctta
agacccaggttcaattcccagcacctacatggcaactctcgactgtaact
ccagtccagactgttctggtctctgctggcacacatgtggcgcacaggca
tgcgtccccctgcctgtgcctcccaagtgctggaattgaaagtgcatgac
accgtgcctggcgaagcaaaacattttataactaagagtagaagctagct
tgtgtttaatttcttctgaagccatgaacaacactctaagaagtccacta
agtggtccataaagaagcatacagttgaacagtggacatatatttagaca
tgatcttgcagatcaaactgtgggcttgtgcctgccaggcaagtgttagt
gctattactgagctatacagcttataataaaagcagtttgatgtttggat
cccaatccacagacgaagcacagagaggatttcccagcagagttggggtg
catatctgcatatttccagcatcggccggaagcccctttcggctttgatg
ccccaatagtgggccatctatctttagcctggtggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_73375581_73376519
seq2: B6Ng01-072H10.g_65_1000

seq1  GAATTCAGATTCACTTGGTTGTCCTCACAAATGAGTCAATGTGATATTTT  50
      ||||||||||||||||||||||||||||  ||||||||||||||||||||
seq2  GAATTCAGATTCACTTGGTTGTCCTCAC-GATGAGTCAATGTGATATTTT  49

seq1  CATATTAATCAGAACAAAGTGAGGCTACACGATGATTAAGTGTGGTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTAATCAGAACAAAGTGAGGCTACACGATGATTAAGTGTGGTGCTT  99

seq1  TGGTCAGAATCTTGGAACAGGAGAAGCAAATTCAATATTATAAAAATGAA  150
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  TGGTCAGAATCTTGGAACAGGAGAAGCAAATTCTGTATTATAAAAATGAA  149

seq1  ATTTAGCTAGTAAAAATGACCAACAGCCAGGCAGAGGTGGCACATGTCTC  200
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGCTAGTAAAAATGACCAACAGCCAGGCAGAGGTGGCACATGTCTC  199

seq1  TAATCCCAGCACCCAGGGAGGCGTCAGGCAGATCTCTGTGAGTTCAAAAC  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TAATCCCAGCACCCAGGGAGGCGTCGGGCAGATCTCTGTGAGTTCAAAAC  249

seq1  CAGCTTGGTTTGGTTTAAAAAAAAAAAAAAAGTGAGTTCCAGAATGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTGGTTTGGTTTAAAAAAAAAAAAAAAGTGAGTTCCAGAATGCAGA  299

seq1  GAAACCTTTTCTCTAAAACAAACAAACAAACAACAACCAAATCAAAAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTTTTCTCTAAAACAAACAAACAAACAACAACCAAATCAAAAAAT  349

seq1  TGTGCCTGAAGAGCTGGCTCAACAGTTAAGAGCACTGACTGCTGCTCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGAAGAGCTGGCTCAACAGTTAAGAGCACTGACTGCTGCTCCTT  399

seq1  AGGACCCAGGTTCAATTCCCAGCACCTACATGGCAGCTCTCAACTGTAAC  450
      | ||||||||||||||||||||||||||||||||| ||||| ||||||||
seq2  AAGACCCAGGTTCAATTCCCAGCACCTACATGGCAACTCTCGACTGTAAC  449

seq1  TCCAGTCCAGACTGTTCTGGTCTCTGCTGGCACACATGTGGCGCACAGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTCCAGACTGTTCTGGTCTCTGCTGGCACACATGTGGCGCACAGGC  499

seq1  ATGCATCCCCCTGCCTGTGCCTCCCAAGTGCTGGAATTGAAAGTGCATGA  550
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTCCCCCTGCCTGTGCCTCCCAAGTGCTGGAATTGAAAGTGCATGA  549

seq1  CACCGTGCCTGGCAAAGCAAAACATTTTATAACTAAGAGTAGAAGCTAGC  600
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CACCGTGCCTGGCGAAGCAAAACATTTTATAACTAAGAGTAGAAGCTAGC  599

seq1  TTGTGTTTAATTTCTTCTGAAGCCATGAACAACACTCTAAGAAGTCCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTTTAATTTCTTCTGAAGCCATGAACAACACTCTAAGAAGTCCACT  649

seq1  AAGTGGTCCATAAAGAAGCATACAGTTGAACAGTGGACATATATTTAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTCCATAAAGAAGCATACAGTTGAACAGTGGACATATATTTAGAC  699

seq1  ATGATCTTGCAGATCAAACTGTGGGCTTGTGCCTGCCAGGCAAGTGTTAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTGCAGATCAAACTGTGGGCTTGTGCCTGCCAGGCAAGTGTTAG  749

seq1  TGCTATTACTGAGCTATACAGCTTATAATAAAAGCAGTTTGATGTTTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTACTGAGCTATACAGCTTATAATAAAAGCAGTTTGATGTTTGGA  799

seq1  TCCCAATCCACAGACGAAGCAGAGAGAGGATTTCCCGGCAGAGTTGGGGT  850
      ||||||||||||||||||||| |||||||||||||| |||||||||||||
seq2  TCCCAATCCACAGACGAAGCACAGAGAGGATTTCCCAGCAGAGTTGGGGT  849

seq1  GCATATTTGCATATTTCCAGCAACGGTCCAGGAAGCCCCTTTCGGCTTTG  900
      |||||| ||||||||||||||| |||  | ||||||||||||||||||||
seq2  GCATATCTGCATATTTCCAGCATCGG--CCGGAAGCCCCTTTCGGCTTTG  897

seq1  TTGCCCCACGAGTGGGCCATCTATCTTTAGCCTGGTGGG  939
       |||||||  |||||||||||||||||||||||||||||
seq2  ATGCCCCAATAGTGGGCCATCTATCTTTAGCCTGGTGGG  936