BAC Information

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BAC

Clone NameB6Ng01-073D20
Chromosome5 (Build37)
Map Location 96,903,494 - 97,027,253
singlet/doubletdoublet
Overlap geneFras1
Upstream geneD5Ertd577e, LOC100041354, LOC100040503, LOC666187, EG622731, LOC100041380, EG666203, EG666209, LOC665943, LOC433921, Cxcl13, EG666231, Cnot6l, LOC100040559, Mrpl1
Downstream geneAnxa3, EG666266, LOC670358, Bmp2k, Paqr3, LOC100040598, EG433923, EG666293, C80008, Gk2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073D20.bB6Ng01-073D20.g
ACCDH890428DH890429
length1,131906
definitionDH890428|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D20, 5' end.DH890429|Mus musculus domesticus DNA, BAC clone: B6Ng01-073D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,026,106 - 97,027,253)(96,903,494 - 96,904,394)
sequence
gaattcaagtctccttgcctgaccaataaggaaagtggaaacttcaggga
ctgggattccaacttgcttcctcttaaccaagtctagtttggtccaggtc
catccagagggtgagctagagggtgagctaaaaatacttctagctttgac
attctatgctttcaagaattatactaatgtaaaaaaagaatctaatatat
atattagattataaaccccctgctttaccctgcattaacttgaccctaag
agcatggcccaggctgagtcttcagtacttctcaggagagcagggagaca
caggtaaaacgtcctggaggacagtgatcagaagccagccagggggagca
agggagaggaagagaaccttggttgctgaataaaagggtgaactttggtg
cataaagatgaaggcagatgaaaggagtctgataaggagaggccggtgag
tgagctcaaatatcctgccctaagacactgaggtagaagtaagaacctgt
gtaggtttcagagagcaggggcaaccatgttacgtggggcagacacattc
ttagatgcataagccaaagactgaaccaggcttctataaacgtacaatga
ggttgatagtgtctcaactcacaatgatttatgagtgtaagtttatcaat
ccaaaatttccacatagaaatacatttacttggggagatggaatctgaat
tggccaggcaggacttccagtggagagataaggacggcagcccacctaca
agatctttaacccaaatgtgtcctgcctacaagacgtgcagggataaaga
aacagcagaaatagaggaggcaggggtggcgaaccaatgactgccccaaa
ttcacccctttcatgggcaagaactaatccttgacactatttaatgatac
tctgttatgcctgcagacaggatcctagcataattgtcctctgagaggct
cacccaacatcagatagaaacatatgcagagacccacagctaatgtagat
gaagcttgtgactcttgcgagattgggagacgattgaggactcaagagaa
tagagacccacatggaggagtcagctggaccctgggagcttctcaaactg
agccacattcaagagctaactaggaccccca
gaattcctttctcaggttcctgggtgttttctgaactgctcattaccttc
cccttggcttccaggatcttggtccttttctctctcttctatttttaact
tctagctttactttactgtctgtagttttcactgcactcaagtttgcaat
gaatcggctgcttttgggttcagggttcttcctgtggatagcttcaatct
acttggtgatccttctgctctgttttagagttttgaaagccatgactttt
cagtctctcctgagcttcactgctggggccaatcttttattaattcttaa
agtattccctatagaagtctaccttcttgcccactcctcccagggaggct
aggtagttttaagtactttccccaaagccacagagattatcattgtcata
gtgaggatttaaatgtagagactctagctccatcataattcacccttcat
tactgccccttgatgcattttatgtgttcacaaactaccccaaattgtgg
gggatgaggtttgaatgatttttcttttcctacagagaaaggtgctgtga
catctgatcaaatattgaaatgtagtcattgtggtttgggtatgaagtat
ctttttcaaaaggctcaagtagtagatattttggtcccaaatggtggtac
catttgtcaaggttctgctaactttagtagatgtcatctgacctggcttc
cttcagtgatgaactatataggatgggaaagtgtaagcccaataaacctt
ttcgtttccaactttgctttcgtcatggtggtttgttgtaatagaagccc
taagacacccatgtaagaagtcagagaatccctgtccttggttccttgat
gtctgtctatttttacttctttcatgacttgaagagcatgctactgccgt
gttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_97026106_97027253
seq2: B6Ng01-073D20.b_44_1174 (reverse)

seq1  TGGGGGTCCTAGGTCTAGCTCTTTGATTGGTGGCTCAGTCTCTGAGAAGC  50
      ||||||||||||   ||||||||  ||  |||||||||  | ||||||||
seq2  TGGGGGTCCTAG--TTAGCTCTTGAAT--GTGGCTCAG--TTTGAGAAGC  44

seq1  TCCCGGGGTCCAGCTGACTCCCTTCCTGTGGGGTCTCTATTCTCTTTGAG  100
      |||| |||||||||||||| ||| | ||| |||||||||||||| |||||
seq2  TCCCAGGGTCCAGCTGACT-CCTCCATGT-GGGTCTCTATTCTC-TTGAG  91

seq1  TTCCTCAATCTGTCTCCCAATTCTTCCGCAAGAGTCCACAAGCTTCATCT  150
       ||||||||| ||||||||| |||  ||||||||| ||||||||||||||
seq2  -TCCTCAATC-GTCTCCCAA-TCT--CGCAAGAGT-CACAAGCTTCATCT  135

seq1  AACATTTAGCTGTGGGTCTCTGCATATGTTTCTATCTGATGTTGGGTGGA  200
       ||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  -ACA-TTAGCTGTGGGTCTCTGCATATGTTTCTATCTGATGTTGGGT-GA  182

seq1  GCCTCTCAGAGGACAATTATGCTAGGATCCTGTCTGCAGGCATAACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTCAGAGGACAATTATGCTAGGATCCTGTCTGCAGGCATAACAGAG  232

seq1  TATCATT-AATAGTGTCAAGGATTAGTTCTTGCCCATGAAAGGGGTGAAT  299
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTAAATAGTGTCAAGGATTAGTTCTTGCCCATGAAAGGGGTGAAT  282

seq1  TTGGGGCAGTCATTGGTTCGCCACCCCTGCCTCCTCTATTTCTGCTGTTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGCAGTCATTGGTTCGCCACCCCTGCCTCCTCTATTTCTGCTGTTT  332

seq1  CTTTATCCCTGCACGTCTTGTAGGCAGGACACATTTGGGTTAAAGATCTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCCCTGCACGTCTTGTAGGCAGGACACATTTGGGTTAAAGATCTT  382

seq1  GTAGGTGGGCTGCCGTCCTTATCTCTCCACTGGAAGTCCTGCCTGGCCAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGGCTGCCGTCCTTATCTCTCCACTGGAAGTCCTGCCTGGCCAA  432

seq1  TTCAGATTCCATCTCCCCAAGTAAATGTATTTCTATGTGGAAATTTTGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTCCATCTCCCCAAGTAAATGTATTTCTATGTGGAAATTTTGGA  482

seq1  TTGATAAACTTACACTCATAAATCATTGTGAGTTGAGACACTATCAACCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAACTTACACTCATAAATCATTGTGAGTTGAGACACTATCAACCT  532

seq1  CATTGTACGTTTATAGAAGCCTGGTTCAGTCTTTGGCTTATGCATCTAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTACGTTTATAGAAGCCTGGTTCAGTCTTTGGCTTATGCATCTAAG  582

seq1  AATGTGTCTGCCCCACGTAACATGGTTGCCCCTGCTCTCTGAAACCTACA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTCTGCCCCACGTAACATGGTTGCCCCTGCTCTCTGAAACCTACA  632

seq1  CAGGTTCTTACTTCTACCTCAGTGTCTTAGGGCAGGATATTTGAGCTCAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTCTTACTTCTACCTCAGTGTCTTAGGGCAGGATATTTGAGCTCAC  682

seq1  TCACCGGCCTCTCCTTATCAGACTCCTTTCATCTGCCTTCATCTTTATGC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCGGCCTCTCCTTATCAGACTCCTTTCATCTGCCTTCATCTTTATGC  732

seq1  ACCAAAGTTCACCCTTTTATTCAGCAACCAAGGTTCTCTTCCTCTCCCTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAGTTCACCCTTTTATTCAGCAACCAAGGTTCTCTTCCTCTCCCTT  782

seq1  GCTCCCCCTGGCTGGCTTCTGATCACTGTCCTCCAGGACGTTTTACCTGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCCTGGCTGGCTTCTGATCACTGTCCTCCAGGACGTTTTACCTGT  832

seq1  GTCTCCCTGCTCTCCTGAGAAGTACTGAAGACTCAGCCTGGGCCATGCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCCTGCTCTCCTGAGAAGTACTGAAGACTCAGCCTGGGCCATGCTC  882

seq1  TTAGGGTCAAGTTAATGCAGGGTAAAGCAGGGGGTTTATAATCTAATATA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGGTCAAGTTAATGCAGGGTAAAGCAGGGGGTTTATAATCTAATATA  932

seq1  TATATTAGATTCTTTTTTTACATTAGTATAATTCTTGAAAGCATAGAATG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTAGATTCTTTTTTTACATTAGTATAATTCTTGAAAGCATAGAATG  982

seq1  TCAAAGCTAGAAGTATTTTTAGCTCACCCTCTAGCTCACCCTCTGGATGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTAGAAGTATTTTTAGCTCACCCTCTAGCTCACCCTCTGGATGG  1032

seq1  ACCTGGACCAAACTAGACTTGGTTAAGAGGAAGCAAGTTGGAATCCCAGT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGACCAAACTAGACTTGGTTAAGAGGAAGCAAGTTGGAATCCCAGT  1082

seq1  CCCTGAAGTTTCCACTTTCCTTATTGGTCAGGCAAGGAGACTTGAATTC  1148
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAAGTTTCCACTTTCCTTATTGGTCAGGCAAGGAGACTTGAATTC  1131

seq1: chr5_96903494_96904394
seq2: B6Ng01-073D20.g_69_974

seq1  GAATTCCTTTCTCAGGTTCCTGGGTGTTTTCTGAACTGCTCATTACCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCTCAGGTTCCTGGGTGTTTTCTGAACTGCTCATTACCTTC  50

seq1  CCCTTGGCTTCCAGGATCTTGGTCCTTTTCTCTCTCTTCTATTTTTAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGCTTCCAGGATCTTGGTCCTTTTCTCTCTCTTCTATTTTTAACT  100

seq1  TCTAGCTTTACTTTACTGTCTGTAGTTTTCACTGCACTCAAGTTTGCAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGCTTTACTTTACTGTCTGTAGTTTTCACTGCACTCAAGTTTGCAAT  150

seq1  GAATCGGCTGCTTTTGGGTTCAGGGTTCTTCCTGTGGATAGCTTCAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCGGCTGCTTTTGGGTTCAGGGTTCTTCCTGTGGATAGCTTCAATCT  200

seq1  ACTTGGTGATCCTTCTGCTCTGTTTTAGAGTTTTGAAAGCCATGACTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTGATCCTTCTGCTCTGTTTTAGAGTTTTGAAAGCCATGACTTTT  250

seq1  CAGTCTCTCCTGAGCTTCACTGCTGGGGCCAATCTTTTATTAATTCTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTCCTGAGCTTCACTGCTGGGGCCAATCTTTTATTAATTCTTAA  300

seq1  AGTATTCCCTATAGAAGTCTACCTTCTTGCCCACTCCTCCCAGGGAGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCCCTATAGAAGTCTACCTTCTTGCCCACTCCTCCCAGGGAGGCT  350

seq1  AGGTAGTTTTAAGTACTTTCCCCAAAGCCACAGAGATTATCATTGTCATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAGTTTTAAGTACTTTCCCCAAAGCCACAGAGATTATCATTGTCATA  400

seq1  GTGAGGATTTAAATGTAGAGACTCTAGCTCCATCATAATTCACCCTTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGATTTAAATGTAGAGACTCTAGCTCCATCATAATTCACCCTTCAT  450

seq1  TACTGCCCCTTGATGCATTTTATGTGTTCACAAACTACCCCAAATTGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCCCCTTGATGCATTTTATGTGTTCACAAACTACCCCAAATTGTGG  500

seq1  GGGATGAGGTTTGAATGATTTTTCTTTTCCTACAGAGAAAGGTGCTGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGAGGTTTGAATGATTTTTCTTTTCCTACAGAGAAAGGTGCTGTGA  550

seq1  CATCTGATCAAATATTGAAATGTAGTCATTGTGGTTTGGGTATGAAGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGATCAAATATTGAAATGTAGTCATTGTGGTTTGGGTATGAAGTAT  600

seq1  C-TTTTCAAAAGGCTCAAGTAGTAGATA-TTTGGTCCCAAATGGTGGTAC  648
      | |||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CTTTTTCAAAAGGCTCAAGTAGTAGATATTTTGGTCCCAAATGGTGGTAC  650

seq1  CATTTGTCAAGGTTCTGCTAACTTTAGTAGATGTCATCTGACCTGGCTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTCAAGGTTCTGCTAACTTTAGTAGATGTCATCTGACCTGGCTTC  700

seq1  CTTCAGTGATGAACTATATAGGATGGGAAAGTGTAAGCCCAATAAACCTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTGATGAACTATATAGGATGGGAAAGTGTAAGCCCAATAAACCTT  750

seq1  TTCGTTCCCAAC-TTGCTTTCGTCATGGTGGTTTGTTGTAATAGAAGCCC  797
      |||||| ||||| |||||||||||||||||||||||||||||||||||||
seq2  TTCGTTTCCAACTTTGCTTTCGTCATGGTGGTTTGTTGTAATAGAAGCCC  800

seq1  TAAGACA-CCATGTAAGAAGTCAGAGAAT-CCTGTCCTTGGTTCCTTGAT  845
      ||||||| ||||||||||||||||||||| ||||||||||||||||||||
seq2  TAAGACACCCATGTAAGAAGTCAGAGAATCCCTGTCCTTGGTTCCTTGAT  850

seq1  GTCTTGTCTATTTTTAC-TCCAGCAGGACGTGAAGAGCATGCTACTGCCG  894
      ||| ||||||||||||| ||   || ||| ||||||||||||||||||||
seq2  GTC-TGTCTATTTTTACTTCTTTCATGACTTGAAGAGCATGCTACTGCCG  899

seq1  TGGTGAA  901
      || ||||
seq2  TGTTGAA  906