BAC Information

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BAC

Clone NameB6Ng01-073K07
Chromosome5 (Build37)
Map Location 124,250,828 - 124,395,950
singlet/doubletdoublet
Overlap geneKntc1, LOC100040005, Gpr109a, Gpr81, Denr, Ccdc62
Upstream geneAnapc5, Rnf34, Fbxl10, LOC100039895, Tmem142a, Morn3, LOC623672, BC022593, Rhof, 4932422M17Rik, Setd1b, Hpd, Psmd9, Wdr66, LOC100042824, Bcl7a, Mlxip, LOC673222, Il31, Lrrc43, B3gnt4, Diablo, Vps33a, Clip1, Zcchc8, Rsrc2
Downstream geneHip1r, Vps37b, Abcb9, Ogfod2, Arl6ip4, Pitpnm2, Mphosph9, 2810006K23Rik, Cdk2ap1, Sbno1, Setd8, BC003324, LOC606492, 6330548G22Rik, 2900002H16Rik, Rpl32-ps5c, Tmed2, Ddx55, Eif2b1, Gtf2h3, 4432405B04Rik, Atp6v0a2, Atp6v0a2, Dnahc10, Ccdc92, Zfp664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073K07.bB6Ng01-073K07.g
ACCDH890708DH890709
length1,128749
definitionDH890708|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K07, 5' end.DH890709|Mus musculus domesticus DNA, BAC clone: B6Ng01-073K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(124,394,819 - 124,395,950)(124,250,828 - 124,251,574)
sequence
gaattcactccggagagaacccagctctgtgcatggagccactccacctg
cagctggagttcctgaagaaacagcaaagtgcttccccgagcttccggaa
tcttccagcaatgacagaggctgctccggaggttgtgaaaaccctcgttt
accgccagtccagttggttagtgagatgtatgtgaggctcccatggatat
ggaactggtgtcttaatgggtatagtctcgtgggatgtccacctgtggga
cctgtcactaactccaggtacacaggtcccatcaaaagcaccagactgaa
ttgtctgtgcacccaactcctaaggaaacagagctccttttttccaagaa
ggaaacaaataaaccaacccaggatgtccccattctgcccctgcatttgt
tctccctgttttctgctgagaaggttctccgtcaggttctggctagttct
gtctacagtccagtcatagctcaaatgctaactcttcaaatttactttct
caatcaatctggtctaaacaagtttctctcccttgctctctgttctactt
cccattaccctactttacaaatgtgttaaataaggctggaagggtggctc
agcagttgtgagcactgactgctcttccagaggtcctgagttcaagtccc
accaaccacatgatggctcacaaccacctgtaattggatctaatgtcctc
ttctggtgcgtttgaagacagaacacataaaataaataaatatatctttt
ttaaaaataagtactaggttaatcaagtactcattatatgtaagtattga
cacaacagacttgtacttgaacatcttacttggtccacgcagacactcga
taaacactgatgaacagtgttcagcctactgttggtgctatgctgaccca
cttcatgacccactactgtcatgaagcatataaaatgatggctttagctg
acatataatgtagacaggacttgaagaccattgttgaagtcatggtaagc
caaagattgtaaaatgctgtgtcctttacattaaatggtcagaaataaag
atgtcaaatttcggaagataggcccaaacagggcaccaccaggcctagct
tggcttttcggtctctgtgacagtgaag
gaattcactctgtagctcactcaaactcacagagatccacctgccttgaa
tgctggaattaaaggccatatttatgcttttttttttttttgaaacagaa
tcttatatagcccagtctattttcacactcattgtatagccaaggatgac
cttgaacttttttttttttaagaatttatttctttattttatgtatagga
atgcactagctgtcttcagacacaccggaagagggcatcagatcccatta
cagatggttgtgagccaccatgtggttgctgggaattgaactcaggacct
ctggaagaacagtccatgctcttaaccactaagccatctctccagccctg
accttaatttcttgatctttcatttttacctcatagtcctggggtcacac
catttgctaccatacctggctagttcctagttctgtctattatgcagtag
aggattttagggtcagcctgtaaaacatgataaaatcctacctcaaacta
agatgaataattaaaaatgaaatcttctgacttaagtgtttttgacgtct
gtcctaaactattttgaagaatttgtatggaactgcccaagtcttatcct
atgagcaagatggcaccttgattcctcttaatgtgatatctgcagtgttc
atagatcatgctttaggagacagcaatagattagggaaaactcgaaatgg
atttttgtttttgactgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_124394819_124395950
seq2: B6Ng01-073K07.b_45_1172 (reverse)

seq1  CTTCACTG-CACAGAGACCGCAAAGCCCAGCCTAGGGCCTGCGTGTGGCC  49
      |||||||| ||||||||||| |||||| || ||| |||||| |||  |||
seq2  CTTCACTGTCACAGAGACCGAAAAGCCAAG-CTA-GGCCTG-GTGGTGCC  47

seq1  CTGTCTGGGCCATACTTCCGAAATCTGACATCTTTATCT-TGACCAATTT  98
      |||| ||||||   |||||||||| |||||||||||| | ||||| ||||
seq2  CTGTTTGGGCCTATCTTCCGAAATTTGACATCTTTATTTCTGACC-ATTT  96

seq1  AATGTAAAGGACACAGCATTTTTACAATCTTGGGCTTACCATGACTTCAC  148
      |||||||||||||||||| |||||||||||| ||||||||||||||||| 
seq2  AATGTAAAGGACACAGCA-TTTTACAATCTTTGGCTTACCATGACTTCAA  145

seq1  CAATGGTC-TCAAGTCCTGTCTACATTTATAATGTCAGCTAAAGCCATCA  197
      |||||||| |||||||||||||||| |||| |||||||||||||||||||
seq2  CAATGGTCTTCAAGTCCTGTCTACA-TTAT-ATGTCAGCTAAAGCCATCA  193

seq1  TTTTATATGCTTCATGACAGTAGTGGGTCATGAAGTGGGTCAGCATAGCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATGCTTCATGACAGTAGTGGGTCATGAAGTGGGTCAGCATAGCA  243

seq1  CCAACAGTAGGCTGAACACTGTTCATCAGTGTTTATCGAGTGTCTGCGTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGTAGGCTGAACACTGTTCATCAGTGTTTATCGAGTGTCTGCGTG  293

seq1  GACCAAGTAAGATGTTCAAGTACAAGTCTGTTGTGTCAATACTTACATAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGTAAGATGTTCAAGTACAAGTCTGTTGTGTCAATACTTACATAT  343

seq1  AATGAGTACTTGATTAACCTAGTACTTATTTTTAAAAAAGATATATTTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTACTTGATTAACCTAGTACTTATTTTTAAAAAAGATATATTTAT  393

seq1  TTATTTTATGTGTTCTGTCTTCAAACGCACCAGAAGAGGACATTAGATCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATGTGTTCTGTCTTCAAACGCACCAGAAGAGGACATTAGATCC  443

seq1  AATTACAGGTGGTTGTGAGCCATCATGTGGTTGGTGGGACTTGAACTCAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACAGGTGGTTGTGAGCCATCATGTGGTTGGTGGGACTTGAACTCAG  493

seq1  GACCTCTGGAAGAGCAGTCAGTGCTCACAACTGCTGAGCCACCCTTCCAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTGGAAGAGCAGTCAGTGCTCACAACTGCTGAGCCACCCTTCCAG  543

seq1  CCTTATTTAACACATTTGTAAAGTAGGGTAATGGGAAGTAGAACAGAGAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATTTAACACATTTGTAAAGTAGGGTAATGGGAAGTAGAACAGAGAG  593

seq1  CAAGGGAGAGAAACTTGTTTAGACCAGATTGATTGAGAAAGTAAATTTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAGAGAAACTTGTTTAGACCAGATTGATTGAGAAAGTAAATTTGA  643

seq1  AGAGTTAGCATTTGAGCTATGACTGGACTGTAGACAGAACTAGCCAGAAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTAGCATTTGAGCTATGACTGGACTGTAGACAGAACTAGCCAGAAC  693

seq1  CTGACGGAGAACCTTCTCAGCAGAAAACAGGGAGAACAAATGCAGGGGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACGGAGAACCTTCTCAGCAGAAAACAGGGAGAACAAATGCAGGGGCA  743

seq1  GAATGGGGACATCCTGGGTTGGTTTATTTGTTTCCTTCTTGGAAAAAAGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGGGACATCCTGGGTTGGTTTATTTGTTTCCTTCTTGGAAAAAAGG  793

seq1  AGCTCTGTTTCCTTAGGAGTTGGGTGCACAGACAATTCAGTCTGGTGCTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGTTTCCTTAGGAGTTGGGTGCACAGACAATTCAGTCTGGTGCTT  843

seq1  TTGATGGGACCTGTGTACCTGGAGTTAGTGACAGGTCCCACAGGTGGACA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGGGACCTGTGTACCTGGAGTTAGTGACAGGTCCCACAGGTGGACA  893

seq1  TCCCACGAGACTATACCCATTAAGACACCAGTTCCATATCCATGGGAGCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACGAGACTATACCCATTAAGACACCAGTTCCATATCCATGGGAGCC  943

seq1  TCACATACATCTCACTAACCAACTGGACTGGCGGTAAACGAGGGTTTTCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATACATCTCACTAACCAACTGGACTGGCGGTAAACGAGGGTTTTCA  993

seq1  CAACCTCCGGAGCAGCCTCTGTCATTGCTGGAAGATTCCGGAAGCTCGGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCCGGAGCAGCCTCTGTCATTGCTGGAAGATTCCGGAAGCTCGGG  1043

seq1  GAAGCACTTTGCTGTTTCTTCAGGAACTCCAGCTGCAGGTGGAGTGGCTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCACTTTGCTGTTTCTTCAGGAACTCCAGCTGCAGGTGGAGTGGCTC  1093

seq1  CATGCACAGAGCTGGGTTCTCTCCGGAGTGAATTC  1132
      |||||||||||||||||||||||||||||||||||
seq2  CATGCACAGAGCTGGGTTCTCTCCGGAGTGAATTC  1128

seq1: chr5_124250828_124251574
seq2: B6Ng01-073K07.g_69_817

seq1  GAATTCACTCTGTAGCTCACTCAAACTCACAGAGATCCACCTGCCTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGCTCACTCAAACTCACAGAGATCCACCTGCCTTGAA  50

seq1  TGCTGGAATTAAAGGCCATATTTATGCTTTTTTTTTTTTTTGAAACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAATTAAAGGCCATATTTATGCTTTTTTTTTTTTTTGAAACAGAA  100

seq1  TCTTATATAGCCCAGTCTATTTTCACACTCATTGTATAGCCAAGGATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATATAGCCCAGTCTATTTTCACACTCATTGTATAGCCAAGGATGAC  150

seq1  CTTGAACTTTTTTTTTTTTAAGAATTTATTTCTTTATTTTATGTATAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACTTTTTTTTTTTTAAGAATTTATTTCTTTATTTTATGTATAGGA  200

seq1  ATGCACTAGCTGTCTTCAGACACACCGGAAGAGGGCATCAGATCCCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCACTAGCTGTCTTCAGACACACCGGAAGAGGGCATCAGATCCCATTA  250

seq1  CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCAGGACCT  300

seq1  CTGGAAGAACAGTCCATGCTCTTAACCACTAAGCCATCTCTCCAGCCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAGAACAGTCCATGCTCTTAACCACTAAGCCATCTCTCCAGCCCTG  350

seq1  ACCTTAATTTCTTGATCTTTCATTTTTACCTCATAGTCCTGGGGTCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTAATTTCTTGATCTTTCATTTTTACCTCATAGTCCTGGGGTCACAC  400

seq1  CATTTGCTACCATACCTGGCTAGTTCCTAGTTCTGTCTATTATGCAGTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCTACCATACCTGGCTAGTTCCTAGTTCTGTCTATTATGCAGTAG  450

seq1  AGGATTTTAGGGTCAGCCTGTAAAACATGATAAAATCCTACCTCAAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTTAGGGTCAGCCTGTAAAACATGATAAAATCCTACCTCAAACTA  500

seq1  AGATGAATAATTAAAAATGAAATCTTCTGACTTAAGTGTTTTTGACGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAATAATTAAAAATGAAATCTTCTGACTTAAGTGTTTTTGACGTCT  550

seq1  GTCCTAAACTATTTTGAAGAATTTGTATGGAACTGCCCAAGTCTTATCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAACTATTTTGAAGAATTTGTATGGAACTGCCCAAGTCTTATCCT  600

seq1  ATGAGCAAGATGGCACCTTGATTCCTCTTAATGTGATATCTGCAGTGTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCAAGATGGCACCTTGATTCCTCTTAATGTGATATCTGCAGTGTTC  650

seq1  ATAGATCATGCTTTAGGAGACAGCAATAGATTAGGGAAAACTCGAAATGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATCATGCTTTAGGAGACAGCAATAGATTAGGGAAAACTCGAAATGG  700

seq1  ATTTT--GTTTTGACTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTG  747
      |||||   |||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTTTTTGACTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTG  749