BAC Information

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BAC

Clone NameB6Ng01-074I19
Chromosome5 (Build37)
Map Location 45,763,006 - 45,892,481
singlet/doubletdoublet
Overlap geneQdpr, EG624224, Lap3
Upstream geneLOC545747, Ldb2, LOC100041481, LOC100040737
Downstream geneLOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576, EG666103
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074I19.bB6Ng01-074I19.g
ACCDH891365DH891366
length1,101205
definitionDH891365|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I19, 5' end.DH891366|Mus musculus domesticus DNA, BAC clone: B6Ng01-074I19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,891,374 - 45,892,481)(45,763,006 - 45,763,210)
sequence
gaattcaattcccaattttttattcaagagaaataaacatgaaagttatg
tctccattttaatccataaaatggattttaaaaaaatcccacaacacagt
atgaaatcatgaaactttcttgaaggtgaggaaaacaagcctcaaatgta
actctgtctgactttgtgtctagctgctggtgggctcgattcactcccct
gagcacagaggtcaattgtaggatcttgacttgtgttggtcagggtttct
attgatgagataaaacactacagccataaagtaacttggggaagtttatt
tcagcttacacttttaggaaacagtcattactgaggaaagtcaggacagg
aaatcaaacaggagtctggaggtaggagctgatgcagagtccatgaagga
gtgctatttactgatttgctcctcatggcttgctcagcctggtttctcat
agcacccgggaccactggttccgagatggcactgcccacagtgagctggg
acctcccacatcaattgtcaatcaaggaaatacaccacaggggatttttc
tcaagtgacattccttcttccaaagtgactttagcttgcaccatcaaagt
gatataaaggcaagacagcagacactattcttttggctgtacgtcccatg
agtccatgacaaaatcagaaattacctgatatggaccttggttttactac
tggcacttttgaggtttttttcaatgatttcagcgaatctggttggtgtc
atctcattggctggagactccatcagatgacgggccaagttctgtccaga
agcaaagaggacccctttctcccaggcctcgagatcaccgctgtggaaga
aaagagttactctcaaaagacctcaagtacactgacctttctgctgctaa
ttgaggcacttatcttaaaaaaaaaattaagactacgaacaaaaaatgat
tgccaaagacctagatccatccctaggccaccccactgaggagtagataa
atctgactgagcagtccacttcacaaatttccctttgttgggcctttaat
cctgcacctgggagcaagaggcaggcggattctctctggcttgagaccag
c
agtggctaaattttttggaaagcattaacctagctagaaatttccagttc
taacagcctagtggcctctggttgtatctagtaatgtctttttatagagg
accttgagtaattttcttcatgaatgaaatccatcagacagggcaagcag
tcacaagccagcattactataactgtgattgggagaggtatttgggggtg
gggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_45891374_45892481
seq2: B6Ng01-074I19.b_47_1147 (reverse)

seq1  GCTGGTCTCAAGCTCAGAGAG-ATCCGCCTGCCTCTGCCTCCCAGGTGCA  49
      ||||||||||||| ||||||| ||||||||||||||  ||||||||||||
seq2  GCTGGTCTCAAGC-CAGAGAGAATCCGCCTGCCTCTTGCTCCCAGGTGCA  49

seq1  GGGATTAAAGGCACCACAAAGGGGAAATTTGTGAAGTGGACTGCTCAGTC  99
       ||||||||||| | ||||| |||||||||||||||||||||||||||||
seq2  -GGATTAAAGGCCCAACAAA-GGGAAATTTGTGAAGTGGACTGCTCAGTC  97

seq1  AGATTTATCTTACTTCCTCAGTGGGGTGGGCCTAGGGATGGATCTAGGTC  149
      ||||||||| ||| ||||||||||||| ||||||||||||||||||||||
seq2  AGATTTATC-TAC-TCCTCAGTGGGGT-GGCCTAGGGATGGATCTAGGTC  144

seq1  TTTGGCAATCATTTTTTTGTTCGTAGTCTTAATTTTTTTTTTTAAGATAA  199
      ||||||||||| |||||||||||||||||||| |||||||||||||||||
seq2  TTTGGCAATCA-TTTTTTGTTCGTAGTCTTAA-TTTTTTTTTTAAGATAA  192

seq1  GTGCCTCAATTAGCAGCAGAAAGGTCAGTGTACTTGAGGTCTTTTGAGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCAATTAGCAGCAGAAAGGTCAGTGTACTTGAGGTCTTTTGAGAG  242

seq1  TAACTCTTTTCTTCCACAGCGGTGATCTCGAGGCCTGGGAGAAAGGGGTC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTCTTTTCTTCCACAGCGGTGATCTCGAGGCCTGGGAGAAAGGGGTC  292

seq1  CTCTTTGCTTCTGGACAGAACTTGGCCCGTCATCTGATGGAGTCTCCAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTGCTTCTGGACAGAACTTGGCCCGTCATCTGATGGAGTCTCCAGC  342

seq1  CAATGAGATGACACCAACCAGATTCGCTGAAATCATTGAAAAAAACCTCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAGATGACACCAACCAGATTCGCTGAAATCATTGAAAAAAACCTCA  392

seq1  AAAGTGCCAGTAGTAAAACCAAGGTCCATATCAGGTAATTTCTGATTTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCCAGTAGTAAAACCAAGGTCCATATCAGGTAATTTCTGATTTTG  442

seq1  TCATGGACTCATGGGACGTACAGCCAAAAGAATAGTGTCTGCTGTCTTGC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGACTCATGGGACGTACAGCCAAAAGAATAGTGTCTGCTGTCTTGC  492

seq1  CTTTATATCACTTTGATGGTGCAAGCTAAAGTCACTTTGGAAGAAGGAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATCACTTTGATGGTGCAAGCTAAAGTCACTTTGGAAGAAGGAAT  542

seq1  GTCACTTGAGAAAAATCCCCTGTGGTGTATTTCCTTGATTGACAATTGAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTTGAGAAAAATCCCCTGTGGTGTATTTCCTTGATTGACAATTGAT  592

seq1  GTGGGAGGTCCCAGCTCACTGTGGGCAGTGCCATCTCGGAACCAGTGGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGAGGTCCCAGCTCACTGTGGGCAGTGCCATCTCGGAACCAGTGGTC  642

seq1  CCGGGTGCTATGAGAAACCAGGCTGAGCAAGCCATGAGGAGCAAATCAGT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGTGCTATGAGAAACCAGGCTGAGCAAGCCATGAGGAGCAAATCAGT  692

seq1  AAATAGCACTCCTTCATGGACTCTGCATCAGCTCCTACCTCCAGACTCCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCACTCCTTCATGGACTCTGCATCAGCTCCTACCTCCAGACTCCT  742

seq1  GTTTGATTTCCTGTCCTGACTTTCCTCAGTAATGACTGTTTCCTAAAAGT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTTCCTGTCCTGACTTTCCTCAGTAATGACTGTTTCCTAAAAGT  792

seq1  GTAAGCTGAAATAAACTTCCCCAAGTTACTTTATGGCTGTAGTGTTTTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCTGAAATAAACTTCCCCAAGTTACTTTATGGCTGTAGTGTTTTAT  842

seq1  CTCATCAATAGAAACCCTGACCAACACAAGTCAAGATCCTACAATTGACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAATAGAAACCCTGACCAACACAAGTCAAGATCCTACAATTGACC  892

seq1  TCTGTGCTCAGGGGAGTGAATCGAGCCCACCAGCAGCTAGACACAAAGTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCTCAGGGGAGTGAATCGAGCCCACCAGCAGCTAGACACAAAGTC  942

seq1  AGACAGAGTTACATTTGAGGCTTGTTTTCCTCACCTTCAAGAAAGTTTCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAGTTACATTTGAGGCTTGTTTTCCTCACCTTCAAGAAAGTTTCA  992

seq1  TGATTTCATACTGTGTTGTGGGATTTTTTTAAAATCCATTTTATGGATTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATACTGTGTTGTGGGATTTTTTTAAAATCCATTTTATGGATTA  1042

seq1  AAATGGAGACATAACTTTCATGTTTATTTCTCTTGAATAAAAAATTGGGA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGACATAACTTTCATGTTTATTTCTCTTGAATAAAAAATTGGGA  1092

seq1  ATTGAATTC  1108
      |||||||||
seq2  ATTGAATTC  1101

seq1: chr5_45763006_45763210
seq2: B6Ng01-074I19.g_73_277

seq1  AGTGGCTAAATTTTTTGGAAAGCATTAACCTAGCTAGAAATTTCCAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTAAATTTTTTGGAAAGCATTAACCTAGCTAGAAATTTCCAGTTC  50

seq1  TAACAGCCTAGTGGCCTCTGGTTGTATCTAGTAATGTCTTTTTATAGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGCCTAGTGGCCTCTGGTTGTATCTAGTAATGTCTTTTTATAGAGG  100

seq1  ACCTTGAGTAATTTTCTTCATGAATGAAATCCATCAGACAGGGCAAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGAGTAATTTTCTTCATGAATGAAATCCATCAGACAGGGCAAGCAG  150

seq1  TCACAAGCCAGCATTACTATAACTGTGATTGGGAGAGGTATTTGGGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGCCAGCATTACTATAACTGTGATTGGGAGAGGTATTTGGGGGTG  200

seq1  GGGGA  205
      |||||
seq2  GGGGA  205