BAC Information

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BAC

Clone NameB6Ng01-075M08
Chromosome5 (Build37)
Map Location 60,973,567 - 60,974,776
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546866, Cbfa2t2-ps1
Downstream geneLOC100041498, LOC666597, EG666610
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075M08.bB6Ng01-075M08.g
ACCDH892233DH892234
length1,1631,167
definitionDH892233|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M08, 5' end.DH892234|Mus musculus domesticus DNA, BAC clone: B6Ng01-075M08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttaggcaaatggatgtatctggaggatatcatcctgagtgaggt
aacccaatcacaaaagaagtcacttgatatgcacacactgatacgtggtt
attagcccagaaacctagaatacccaagatataatttgcaaaacacaaga
aaatgaagaaggaggaagaccaacttgtggatacttcattcctccttaga
atagggaataaaatacctatggaaggagttacagagacaaagtttggagc
taagatgaaatgatggactatccatagtgagcattttagaatgcaaaaat
atccccaaagtgactaagttcacctgaatggtataattcgtatattgctc
ccaataattagcatattgaagagagaattatataacatgttgtctatctt
accacaacttactgtagaataatctctagaatgatccacaatggatgtag
aactgtatagcccatttacaaaaatagacttaaatatataataagaacac
atgtctatttcaagtctttcttaattagtaaaatgtgactttttagtgaa
ctgctaaactatagttgctgtatatgaaaactaccaattaatcctggaaa
atgtgttagcctgtaattatgaagtttctacaatttaaatagtttctcaa
ataatttgtgttaattggaaagacataccagaaggcaatattcttaatca
ctgggtagtatttcagagagaaaactttctgtgtagtcacttagtaatat
atacatacatatgtaagtctctcatttagcatgcatgtctaggtctataa
atgtgtgtcaattttttctcaaaataaagtgttatagataacatgggaag
acttagaaatttgtacatgttttcaaatttatgtttcaactcctgtacac
aaatatagttgtacattccatacatatatgttttatttgagttttatatg
ggaagcagcagattttagtttaaatagataagcgatagataatgatgata
gatgatgatagatagatagatagatagatgattgacgacgacgatgagat
agcatattgacatgtatgtactttctgatcaaatgctgctctaggtaggt
ccctgcctgtgaatatgtactactataaaattgtaacagctgcaatagtg
catcttctataag
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccagctggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atgaatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgcctgggcctagcaaac
acagaagtaggatgctcacagtcagctaatggatggatcacagggctccc
aatgaaggagctagagaaagtacccaagagctaaagggatctgcaaccct
atagttgatcaacattatgactaacagtaccctggagctcttgactctag
ctgcatatgtatcaaagatgctagtcgtcaatcactgtaaaagagcccat
gaccgcaacttatatgcccagtacatgggaaccgcaggccaaaagagcac
tgcgtccgtctaggcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_60973567_60974776
seq2: B6Ng01-075M08.b_48_1210 (reverse)

seq1  CTTATAGAAGAAAGAACGGGATACTTATAGAAGAATGCACTTAATTGCAG  50
                             |||||||||| |||||||  |||||| 
seq2  -----------------------CTTATAGAAG-ATGCACT--ATTGCA-  23

seq1  GCTTGTTTACAATTTTATAGTTAGTACATAATCACCAGGCAGAGACCTAC  100
      |||   |||||||||||||| ||||||||| ||| ||||||| |||||||
seq2  GCT--GTTACAATTTTATAG-TAGTACATATTCA-CAGGCAGGGACCTAC  69

seq1  TTAAGAGCAAGCATCTGATCAGAAAGTTACATACATGTCAATATGCCTAT  150
       | ||||| ||||| ||||||||||| |||||||||||||||||| ||||
seq2  CT-AGAGC-AGCATTTGATCAGAAAG-TACATACATGTCAATATG-CTAT  115

seq1  CTCTATCTGTCTGTCTGTCTATCTATCTATCTATCTATCTATCTATCTAT  200
      ||| ||| ||| ||| ||| ||| ||||||||||||||||||||||| ||
seq2  CTC-ATC-GTC-GTC-GTCAATC-ATCTATCTATCTATCTATCTATC-AT  159

seq1  CTATCTATCTATCTATTTATCTATCTGCTTATCTATTTAAACTAAAATCC  250
      | ||||||| |||   ||||||||| |||||||||||||||||||||| |
seq2  C-ATCTATC-ATC--ATTATCTATC-GCTTATCTATTTAAACTAAAAT-C  203

seq1  TGCTGCTTCCCATATAAAACTCAAATAAAACATATATGTATGGAATGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCTTCCCATATAAAACTCAAATAAAACATATATGTATGGAATGTAC  253

seq1  AACTATATTTGTGTACAGGAGTTGAAACATAAATTTGAAAACATGTACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATATTTGTGTACAGGAGTTGAAACATAAATTTGAAAACATGTACAA  303

seq1  ATTTCTAAGTCTTCCCATGTTATCTATAACACTTTATTTTGAGAAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTAAGTCTTCCCATGTTATCTATAACACTTTATTTTGAGAAAAAAT  353

seq1  TGACACACATTTATAGACCTAGACATGCATGCTAAATGAGAGACTTACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACACACATTTATAGACCTAGACATGCATGCTAAATGAGAGACTTACAT  403

seq1  ATGTATGTATATATTACTAAGTGACTACACAGAAAGTTTTCTCTCTGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATGTATATATTACTAAGTGACTACACAGAAAGTTTTCTCTCTGAAA  453

seq1  TACTACCCAGTGATTAAGAATATTGCCTTCTGGTATGTCTTTCCAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACCCAGTGATTAAGAATATTGCCTTCTGGTATGTCTTTCCAATTAA  503

seq1  CACAAATTATTTGAGAAACTATTTAAATTGTAGAAACTTCATAATTACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATTATTTGAGAAACTATTTAAATTGTAGAAACTTCATAATTACAG  553

seq1  GCTAACACATTTTCCAGGATTAATTGGTAGTTTTCATATACAGCAACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAACACATTTTCCAGGATTAATTGGTAGTTTTCATATACAGCAACTAT  603

seq1  AGTTTAGCAGTTCACTAAAAAGTCACATTTTACTAATTAAGAAAGACTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTAGCAGTTCACTAAAAAGTCACATTTTACTAATTAAGAAAGACTTG  653

seq1  AAATAGACATGTGTTCTTATTATATATTTAAGTCTATTTTTGTAAATGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGACATGTGTTCTTATTATATATTTAAGTCTATTTTTGTAAATGGG  703

seq1  CTATACAGTTCTACATCCATTGTGGATCATTCTAGAGATTATTCTACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGTTCTACATCCATTGTGGATCATTCTAGAGATTATTCTACAGT  753

seq1  AAGTTGTGGTAAGATAGACAACATGTTATATAATTCTCTCTTCAATATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTGGTAAGATAGACAACATGTTATATAATTCTCTCTTCAATATGC  803

seq1  TAATTATTGGGAGCAATATACGAATTATACCATTCAGGTGAACTTAGTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTGGGAGCAATATACGAATTATACCATTCAGGTGAACTTAGTCA  853

seq1  CTTTGGGGATATTTTTGCATTCTAAAATGCTCACTATGGATAGTCCATCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGGGATATTTTTGCATTCTAAAATGCTCACTATGGATAGTCCATCA  903

seq1  TTTCATCTTAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATAGGTATTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATCTTAGCTCCAAACTTTGTCTCTGTAACTCCTTCCATAGGTATTT  953

seq1  TATTCCCTATTCTAAGGAGGAATGAAGTATCCACAAGTTGGTCTTCCTCC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCTATTCTAAGGAGGAATGAAGTATCCACAAGTTGGTCTTCCTCC  1003

seq1  TTCTTCATTTTCTTGTGTTTTGCAAATTATATCTTGGGTATTCTAGGTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCATTTTCTTGTGTTTTGCAAATTATATCTTGGGTATTCTAGGTTT  1053

seq1  CTGGGCTAATAACCACGTATCAGTGTGTGCATATCAAGTGACTTCTTTTG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTAATAACCACGTATCAGTGTGTGCATATCAAGTGACTTCTTTTG  1103

seq1  TGATTGGGTTACCTCACTCAGGATGATATCCTCCAGATACATCCATTTGC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGGGTTACCTCACTCAGGATGATATCCTCCAGATACATCCATTTGC  1153

seq1  CTAAGAATTC  1210
      ||||||||||
seq2  CTAAGAATTC  1163