BAC Information

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BAC

Clone NameB6Ng01-075O22
Chromosome5 (Build37)
Map Location 51,167,915 - 51,168,659
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666223, Gpr125, EG637307, LOC100041015, LOC242987
Downstream geneEG624734, LOC666265, LOC100041059, Ppargc1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075O22.bB6Ng01-075O22.g
ACCDH892351DH892352
length7491,117
definitionDH892351|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O22, 5' end.DH892352|Mus musculus domesticus DNA, BAC clone: B6Ng01-075O22, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccacatcagcttccaaggaagggagtcaaagagaaagtgaaggga
ggattgtggaattactagaaaagagaaagtatatgtatatatatataaaa
tgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtataaata
tattcacaaatatttcccaacctttgtttatactttgttattccctttca
ctagagatcaagtttaaacttctctgtccattcatcaacatattttgttt
tatttctggccatgtgaaactctattagataaacctttcatcttctacag
aaaacacttttcagttcccatctatgttatatttctaattatctctgagt
ttttccccccacttttccatgtgacttgccacatttttctgtctttgttg
atctatagacagaatattgtttatgtccaggttctgtcagtctcttatct
gtactaattcagcaatcagtctctaagactgagtttcacatcaaccactg
catcaatgaatgcctgccccaaattttacttttctctgtggaacacatgt
aaacaataaataagacaggaaattgaacacacattgggcaggggtgcaca
cagtaggtaggaatatatgatgatacagtcattacagaaagcagtatagt
tgggttttcaaatatagaaaactgtaatgggagcttgccattatcttcta
ggattttattttttttgtaaagaaaagaaattttcgttctcacagaaat
gaattcttagcatatgattttctttttcagagcatggacataaccattct
gttttgtaaattggatattttatttatttacatttcaaatgttatcccct
tatccctttgcaaactctttattccatacccccttaccctgcttctatga
gggtgctcccccatccacctacccactcccacttcactgccctagcattc
ctctaccctgagatatcaagctgtcacaggaccaagggcatctatctcct
cccattgatgccagataaggccccctcagttcctccaggccttcctcgaa
ctcctctattgaggtccctgtgctcagtctgatggttggctatgagcatc
cacatctctattggtcaggatctggcagagcctcttaggagacagctgta
tcaggcttctgtcagcaagaactttttggcatcagcaatactctctgagt
ttggggtctgcatgtgggatggatccccaggtggagcagtctccagatgg
cctttccttcagtctctgctccactcttcgtccctgtattttctttagac
agaaacaattctgggttaaaattttggagaagggtggttggccccatgcc
ttaaccagggggtgatgcctaaactctggatatggtcttggtaggttctg
actcccttttgtgggatgtttcagctaatatcatccctatggggtcctgg
gagacacttgctttcctggcatctgggactttctggttgctatttccaat
ttctacacacccctgttctacttcctcaccatctgtacatctgctccatc
tcctcccatacctgattctttccctcctttttccctccccctcttccctt
ccacccaagtccctcccaccctctactttccttgattattttgttccccc
ttctaagtagaattgaagcattcactctttggtcttcctttctcctgagc
ttcatgtggtccatgagttgtatctggggtatccatgctctttgccctat
atccacttatcagtgagtatataccatgtttgtgctgtaattttcatgag
taaattgtttttaaatagctgagtagtattcttagaaatccagggaccca
cattttttctggtattc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_51167915_51168659
seq2: B6Ng01-075O22.b_48_796

seq1  GAATTCCACATCAGCTTCCAAGGAAGGGAGTCAAAGAGAAAGTGAAGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACATCAGCTTCCAAGGAAGGGAGTCAAAGAGAAAGTGAAGGGA  50

seq1  GGATTGTGGAATTACTAGAAAAGAGAAAGTATATGTATATATATATAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGTGGAATTACTAGAAAAGAGAAAGTATATGTATATATATATAAAA  100

seq1  TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGTATAAATA  150

seq1  TATTCACAAATATTTCCCAACCTTTGTTTATACTTTGTTATTCCCTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACAAATATTTCCCAACCTTTGTTTATACTTTGTTATTCCCTTTCA  200

seq1  CTAGAGATCAAGTTTAAACTTCTCTGTCCATTCATCAACATATTTTGTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGATCAAGTTTAAACTTCTCTGTCCATTCATCAACATATTTTGTTT  250

seq1  TATTTCTGGCCATGTGAAACTCTATTAGATAAACCTTTCATCTTCTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCTGGCCATGTGAAACTCTATTAGATAAACCTTTCATCTTCTACAG  300

seq1  AAAACACTTTTCAGTTCCCATCTATGTTATATTTCTAATTATCTCTGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACACTTTTCAGTTCCCATCTATGTTATATTTCTAATTATCTCTGAGT  350

seq1  TTTTCCCCCCACTTTTCCATGTGACTTGCCACATTTTTCTGTCTTTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCCCCCACTTTTCCATGTGACTTGCCACATTTTTCTGTCTTTGTTG  400

seq1  ATCTATAGACAGAATATTGTTTATGTCCAGGTTCTGTCAGTCTCTTATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATAGACAGAATATTGTTTATGTCCAGGTTCTGTCAGTCTCTTATCT  450

seq1  GTACTAATTCAGCAATCAGTCTCTAAGACTGAGTTTCACATCAACCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTAATTCAGCAATCAGTCTCTAAGACTGAGTTTCACATCAACCACTG  500

seq1  CATCAATGAATGCCTGCCCCAAATTTTAC-TTTCTCTGTGGAACACATGT  549
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CATCAATGAATGCCTGCCCCAAATTTTACTTTTCTCTGTGGAACACATGT  550

seq1  AAACAATAAATAAGACAGG-AAGTGAACACACATTGGGCAGGGGTGCACA  598
      ||||||||||||||||||| || |||||||||||||||||||||||||||
seq2  AAACAATAAATAAGACAGGAAATTGAACACACATTGGGCAGGGGTGCACA  600

seq1  CAGTAGGTAGGAATATATGATGATACAGTCATTACAGAAAGCAGTATAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGGTAGGAATATATGATGATACAGTCATTACAGAAAGCAGTATAGT  650

seq1  T-GGTTTTCAAATATAGAAAACTGTAATGGGAGCTTGCCAATTATCTTCT  697
      | ||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGGGTTTTCAAATATAGAAAACTGTAATGGGAGCTTGCC-ATTATCTTCT  699

seq1  AGGATTTTATTTTTTTGTAAAAGAAAAGAAA-TTTCG-TCTCACAGAAAT  745
      ||||||||||||||||   |||||||||||| ||||| ||||||||||||
seq2  AGGATTTTATTTTTTTTGTAAAGAAAAGAAATTTTCGTTCTCACAGAAAT  749