BAC Information

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BAC

Clone NameB6Ng01-079I23
Chromosome5 (Build37)
Map Location 59,847,495 - 59,848,375
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041385, LOC100041396, LOC666499, EG625870, LOC100041425
Downstream geneLOC546866, Cbfa2t2-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-079I23.bB6Ng01-079I23.g
ACCDH894934DH894935
length1,231988
definitionDH894934|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I23, 5' end.DH894935|Mus musculus domesticus DNA, BAC clone: B6Ng01-079I23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccaatttttaatggggttatttgatt
ttctggagtctactttcttgagttctttatatatatatattggatagtag
ttccctatctgatttaggataggtaaagatcctttcccaatctgttggtg
gcctttttgtcttattgacagtgtcttatgccttgcagaagctttgcaat
tttatggggtcccatttgtcgattctcaatcttacagcacaagccattgc
ttttatattcaggaattttccccctgtacccatatcttcgagtcttctcc
ctactttctcctctataagtttcagtgtctctggttttatgtggagtttc
ttaatccacttagatttgaccttagtacaaggagatagaaatggatcaat
tcccattcttctacatgataaccaccagttgtgccagcatcatttgttga
aaatgccgtcttttacatgctccactatgttcatagcaaccttatttata
ttatccagaagctggaaagaacccagatgcccctcaacagaggaatggat
acaaaaaatttggtacatttacacaatggagtactactcagctattaaaa
agaatgaatttatgaaattcctaggcaaatggttggacctggagggcatc
atcctgagtgaagtaacccaatcacaaaaggactcaaatgatatgttctc
actgataagcggatattagcccagaaacttagaatacccaagatataaga
tacaatttgtgaaaaacatgacactcaagaagaacgaagaccaaagtgtg
gacactttgccacttcttattagaattaggaacaaaacacccatggaagg
agttacagagaaaaagtgtggagctgagacgaaaggatggatcatctaga
gactgccataaccaggattcatcccataatcagcctccaaatgctgacat
gattgcatacactagcagattttgctgaaaggacatgatatggctgtctc
tgtgagactatgctggggcctagcaaaaacagaagtggatgctcacagtc
agctattgggtggatcaaagggcttcatggagggctagagaaaatactca
ggagctacggaatcaccttataggtggaacaaattggaactacggtcccg
agcctttgttcctaactcatgtatcaaatgcttgcttactgagagaaggt
ccatgggttcatgtcaacctctaatatgtgc
gaattctcttaatccaatgaagatgctttgcacaatacttagcatctcac
tttgtaacatttggctaatttctcttcctaggtaatatatattttattct
atttgaaaatatatcttaagttcccccttgtggtggcacacacctttagt
cccagcacttgtggtcgaagcaggtgaaccctggcctacaaaggaagttt
caggacatccagggcttttatgataagaaaccctatctcaaaaaatctag
gaaaaaaaaggaaaaaaggaaaataagaaaatatatcttaaaataactca
atatttatcttctatatgaagagtcattattctttttgtataataagcaa
ctataagctaacaaataaatgtagctttgttaaaacttaatttctttctt
cctttctttagtggcccactgatcattgagtagagaattgtttaatttcc
atgagttgataggattgctgttgtatttgctgttgttgatgttcagctta
atccaaagttttgtgataagatacaaaggattatttcagttttctcgtat
ctgttgtgacctgctttgtgaccgactacatggccaattttgacactgag
gcactaagaagaagatatattcctttgtgattaggggaaatgttctgtag
ctatttcttaggcccatttgattcataatatctgtcagttacattacttc
tctgtttagtttctgtctcagtggcctgcctactaatgaaagtgggatgt
gaaagtctcccactattaatgtgtagggtttgatgtaagatttaggcttt
aataatgcttctattatgaatgtagataccctttgcatttggcacataga
tgtttaaaattgagacatcatctgggtggatgttattttggtaagtataa
aatatcgttcctcatctcttttaattaattttggactatgttattagata
tgatctggctactccaccttgcttttttgaaacacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_59847495_59848375
seq2: B6Ng01-079I23.g_70_951

seq1  GAATTCTCTTAATCCAATGAAGATGCTTTGCACAATACTTAGCATCTCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTAATCCAATGAAGATGCTTTGCACAATACTTAGCATCTCAC  50

seq1  TTTGTAACATTTGGCTAATTTCTCTTCCTAGGTAATATATATTTTATTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTAACATTTGGCTAATTTCTCTTCCTAGGTAATATATATTTTATTCT  100

seq1  ATTTGAAAATATATCTTAAGTTCCCCCTTGTGGTGGCACACACCTTTAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGAAAATATATCTTAAGTTCCCCCTTGTGGTGGCACACACCTTTAGT  150

seq1  CCCAGCACTTGTGGTCGAAGCAGGTGAACCCTGGCCTACAAAGGAAGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCACTTGTGGTCGAAGCAGGTGAACCCTGGCCTACAAAGGAAGTTT  200

seq1  CAGGACATCCAGGGCTTTTATGATAAGAAACCCTATCTCAAAAAATCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACATCCAGGGCTTTTATGATAAGAAACCCTATCTCAAAAAATCTAG  250

seq1  GAAAAAAAAGGAAAAAAGGAAAATAAGAAAATATATCTTAAAATAACTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAAGGAAAAAAGGAAAATAAGAAAATATATCTTAAAATAACTCA  300

seq1  ATATTTATCTTCTATATGAAGAGTCATTATTCTTTTTGTATAATAAGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTATCTTCTATATGAAGAGTCATTATTCTTTTTGTATAATAAGCAA  350

seq1  CTATAAGCTAACAAATAAATGTAGCTTTGTTAAAACTTAATTTCTTTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAGCTAACAAATAAATGTAGCTTTGTTAAAACTTAATTTCTTTCTT  400

seq1  CCTTTCTTTAGTGGCCCACTGATCATTGAGTAGAGAATTGTTTAATTTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTTTAGTGGCCCACTGATCATTGAGTAGAGAATTGTTTAATTTCC  450

seq1  ATGAGTTGATAGGATTGCTGTTGTATTTGCTGTTGTTGATGTTCAGCTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTGATAGGATTGCTGTTGTATTTGCTGTTGTTGATGTTCAGCTTA  500

seq1  ATCCAAAGTTTTGTGATAAGATACAAAGGATTATTTCAGTTTTCTCGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAAGTTTTGTGATAAGATACAAAGGATTATTTCAGTTTTCTCGTAT  550

seq1  CTGTTGTGACCTGCTTTGTGACCGACTACATGGCCAATTTTGACACTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTGTGACCTGCTTTGTGACCGACTACATGGCCAATTTTGACACTGAG  600

seq1  GCACTAAGAAGAAGATATATTCCTTTGTGATTAGGGGAAATGTTCTGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAAGAAGAAGATATATTCCTTTGTGATTAGGGGAAATGTTCTGTAG  650

seq1  CTATTTCTTAGGCCCATTTGATTCATAATATCTGTCAGTTACATTACTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCTTAGGCCCATTTGATTCATAATATCTGTCAGTTACATTACTTC  700

seq1  TCTGTTTAGTTTCTGTCTCAGTGGCCTGCCTACTAATGAAAGTGGGATGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTAGTTTCTGTCTCAGTGGCCTGCCTACTAATGAAAGTGGGATGT  750

seq1  GAAAGTCTCCCACTATTAATGTGTAGGGTTTGATGTAAGATTTAGGCTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTCTCCCACTATTAATGTGTAGGGTTTGATGTAAGATTTAGGCTTT  800

seq1  AATAATGCTTCTATTATGAATGTAGATACCC-TTGCATTTGGCACATAGA  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATAATGCTTCTATTATGAATGTAGATACCCTTTGCATTTGGCACATAGA  850

seq1  TGTTTAAAATTGAGACATCATCTGGGTGGATG  881
      ||||||||||||||||||||||||||||||||
seq2  TGTTTAAAATTGAGACATCATCTGGGTGGATG  882