BAC Information

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BAC

Clone NameB6Ng01-080B17
Chromosome5 (Build37)
Map Location 26,593,224 - 26,594,271
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100038949, EG272714, EG545739, Speer4a, EG664804, LOC619645, LOC100039045, 5031410I06Rik, LOC434689, LOC664837
Downstream gene4930584F24Rik, Dpp6, B930011P16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080B17.bB6Ng01-080B17.g
ACCDH895335DH895336
length1,057217
definitionDH895335|Mus musculus domesticus DNA, BAC clone: B6Ng01-080B17, 5' end.DH895336|Mus musculus domesticus DNA, BAC clone: B6Ng01-080B17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcctactcctaacataatagtactctgtaacacacatccattca
tgactctgtagccaaacactgagtaatatacagtcattgctctacagctg
ctgaggaaataaaaacaatcacaaaagtatataaaataaatcaggaaggc
cagagtcatgtgcctcagttttgcttgcaatacagcatcagtgataacca
cacaccagatatgataaccttcaaagtcactctgggaaatagctttgata
gatgtggttgtccttgaccatacgcttgctgtgttttgttgttgctaatt
aggaaggacatttgaagctccccttttgccataccagatataagagtata
ttgtggaagtagttgttccaggtgactgggtgagtatttactgaatggaa
ctgactctgcgtggggatcaatcagagagttaatgtgtgaaagagttaac
cctgtgcttccacaaagagttgctggcaagccaggacttttaaaagttca
gcacctaaagaagcagggtagaggttttgattatacactggcacatgtcc
tctgggttttatgaactgattcagccagagaaagggtcatccgcaacaca
gtggaaagtgggtgaaacttgatttagcccacactgccaagatactacta
taatggttggttctcattttccatcttagaactggaaggggcctgggttt
ttacaaagcctactcaaattatgggtcctcacaacacttgtgtggattgt
ttggtaaatgctaccagatgtatacattatcctggatttattctactggc
acttgtgatatgaaataatatttcatgtcagcccttaccagactaagctg
tcctaaatgttcagttgtggatcacagtgtctctttttctctccagactg
ctaagcatttctagacttggaagctgtttgacggccaatccttttatatg
tataatattttcgtctttaatggattttggattcatttacatttcgacgg
tgttacctttccaggtcccctttccccaaacccccatccatccttcttcc
cctggtt
aggtgggtggcctagctacttccccaattgggccaggggtagtaggggaa
ggtttaggagtgctcagcctttgagctagccaaggcattttaaaattaac
tggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcccgc
gcccgcgagctggcataatagtgaacaagcccgcaccgataacccttcca
aacaattcttccacctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_26593224_26594271
seq2: B6Ng01-080B17.b_41_1092

seq1  GAATTCTCATACTCCTAACAT-ATAGTACTCTGTAACACACGTCCATTCA  49
      |||||||| |||||||||||| ||||||||||||||||||| ||||||||
seq2  GAATTCTCCTACTCCTAACATAATAGTACTCTGTAACACACATCCATTCA  50

seq1  TGACTCTGTA-CCAAACACTGAGTAATATACAGTCATTGCTCTACAGCTG  98
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTGTAGCCAAACACTGAGTAATATACAGTCATTGCTCTACAGCTG  100

seq1  CTGAGGAAATAAAAACAATCACAAAAGTATATAAAATAAATCAGGAAGGC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAAATAAAAACAATCACAAAAGTATATAAAATAAATCAGGAAGGC  150

seq1  CAGAGTCACGTGCCTCAGTTTTGCTTGCAATACAGCATCAGTGATAACCA  198
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCATGTGCCTCAGTTTTGCTTGCAATACAGCATCAGTGATAACCA  200

seq1  CACACCAGATATGATAACCTTCAAAGTCACTCTGGGAAATAGCTTTGATA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCAGATATGATAACCTTCAAAGTCACTCTGGGAAATAGCTTTGATA  250

seq1  GATGCGGTTGTCCTTGACCATACACTTGCTGTGTTTTGTTGTTGCTAATT  298
      |||| |||||||||||||||||| ||||||||||||||||||||||||||
seq2  GATGTGGTTGTCCTTGACCATACGCTTGCTGTGTTTTGTTGTTGCTAATT  300

seq1  AGGAAGGACACTTGAAGCTCCCCTTTTGCCATAGCAGATATAAGAGTATA  348
      |||||||||| |||||||||||||||||||||| ||||||||||||||||
seq2  AGGAAGGACATTTGAAGCTCCCCTTTTGCCATACCAGATATAAGAGTATA  350

seq1  TTGTGGAAGTACTTGTTCCAGCTGACTGGGTGAGT-TTTACTGAATGGAA  397
      ||||||||||| ||||||||| ||||||||||||| ||||||||||||||
seq2  TTGTGGAAGTAGTTGTTCCAGGTGACTGGGTGAGTATTTACTGAATGGAA  400

seq1  CTGACTCTGTGTGGGGATCAATCAGAGAGTTAATGTGTGAAAGAGTTAAC  447
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTCTGCGTGGGGATCAATCAGAGAGTTAATGTGTGAAAGAGTTAAC  450

seq1  CCTGTGTTTCCACAAAGAGTTGCTGGCAAGCCAGGACTTTTAAAAGTTCA  497
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCTTCCACAAAGAGTTGCTGGCAAGCCAGGACTTTTAAAAGTTCA  500

seq1  GCACCTACACAGGCCGGGTAGAGGTTTTGATTATACACTGGCACAGGTCC  547
      ||||||| | | || |||||||||||||||||||||||||||||| ||||
seq2  GCACCTAAAGAAGCAGGGTAGAGGTTTTGATTATACACTGGCACATGTCC  550

seq1  TCTGGGTTTTATGAACTGATTCAGCCAGAGAAAGGGTCATCCGCAACACA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGTTTTATGAACTGATTCAGCCAGAGAAAGGGTCATCCGCAACACA  600

seq1  GTGGAGAGTGGGTGAAACTTGATTTAGCCCA-ACTGCCAAGATACTACTA  646
      ||||| ||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGGAAAGTGGGTGAAACTTGATTTAGCCCACACTGCCAAGATACTACTA  650

seq1  TAGTGGTTGGTTCTCCTTCTCCATCTTAGAACTGGAAGGGGCCTGGG-TT  695
      || |||||||||||| || |||||||||||||||||||||||||||| ||
seq2  TAATGGTTGGTTCTCATTTTCCATCTTAGAACTGGAAGGGGCCTGGGTTT  700

seq1  TTGCAAAGCCTACTC-AAGTATGGGTCCTCACAACAC-TGTGTGGTTTGT  743
      || |||||||||||| || |||||||||||||||||| ||||||| ||||
seq2  TTACAAAGCCTACTCAAATTATGGGTCCTCACAACACTTGTGTGGATTGT  750

seq1  TTGGTAAATGCTACCAGATGTATACATTATCCTGGATTT-TTCTACTGAC  792
      ||||||||||||||||||||||||||||||||||||||| |||||||| |
seq2  TTGGTAAATGCTACCAGATGTATACATTATCCTGGATTTATTCTACTGGC  800

seq1  ACTTGTGATATAAAATAATATTTCATGTCAGCCCTTACCAGACTAAGCTG  842
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTGATATGAAATAATATTTCATGTCAGCCCTTACCAGACTAAGCTG  850

seq1  TCCTTAATGTGCAG-TGTGGAGCACAGTGTCTAATTTTCTCTCCCAGACT  891
      |||| ||||| ||| |||||| ||||||||||  |||||||| |||||||
seq2  TCCTAAATGTTCAGTTGTGGATCACAGTGTCTCTTTTTCTCT-CCAGACT  899

seq1  GCAAAGCATTTCTAGACTTGGAAGCATGTTGCCAGCCATTCCTTTTTTTT  941
      || ||||||||||||||||||||||   ||| | |||| ||||||| | |
seq2  GCTAAGCATTTCTAGACTTGGAAGCTGTTTGACGGCCAATCCTTTTATAT  949

seq1  TTTTTAAATAATTTCGTTTTTACTGGATTTTGCATTCATTTACATTTCAA  991
       | |  |||| |||||| |||| ||||||||| ||||||||||||||| |
seq2  GTAT--AATATTTTCGTCTTTAATGGATTTTGGATTCATTTACATTTCGA  997

seq1  CTGTTATCCCTTTCCCAGTTCACCTTCCCCAAACCCCCTATACCATCCAT  1041
      | ||  | |||||||  || | | |||||||||||||| || |||||| |
seq2  CGGTGTTACCTTTCCAGGTCCCCTTTCCCCAAACCCCC-AT-CCATCCTT  1045

seq1  CTTCCCC  1048
      |||||||
seq2  CTTCCCC  1052