BAC Information

Click to search

BAC

Clone NameB6Ng01-083J15
ChromosomeX (Build37)5 (Build37)
Map Location 125,060,606 - 125,061,67518,084,512 - 18,084,575
singlet/doubletsingletsinglet
Overlap genenone
Upstream gene4930412D23Rik, LOC385523, LOC100040516, Mdm4-ps, EG237030
Downstream geneLOC100040538, LOC100040550, LOC100040562, LOC100040570, LOC669120
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083J15.bB6Ng01-083J15.g
ACCDH897818DH897819
length1,056804
definitionDH897818|Mus musculus domesticus DNA, BAC clone: B6Ng01-083J15, 5' end.DH897819|Mus musculus domesticus DNA, BAC clone: B6Ng01-083J15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(125,060,606 - 125,061,675)(18,084,512 - 18,084,575)
sequence
gaattcaagcagggcagcaacctcagggatgggagataattcagaaccca
tgatagagtacactttactgttctcttatagaatccaggaccacaagccc
ccatcagtcaataagtcaaaaacaccctacaaacaaacaaagaaaaaaaa
acaaaaaaaaactcacaacaacaacaaaaaagcaacaaaatcctacaagt
ttgcctacatcctggtctatggaagtagtttctcagttgaagttgaagcc
tcccagatacatttagcttaagccaagttgacataaacttagacaggaca
aatactatcatgctatagttgtgcaaaccaaaaacctggagttactcttg
attctagttagccttgattactctggtgttacttctaactccaatgcatc
tccaactcgtgcttatttaaatctttactatcctttgaaactaggtttct
ctaaataacccattcaaactgctatcaacttttcttgggaataagtaaac
tagtaatcatctataagaatcctcagccattcataactaactaattagca
agaaaataggcaaaatattacagcacaagaccaaagtgaatcataccaat
aagtgatgctcaatgaaagaactaatttgaaaaatacatacggggttttt
tttttttttttgtaatagagcaaacaaattaaccaagggtggtataaatc
agattatttcttacttttgggagttaaagattgacagcataaaggaattt
gctatcactatgaaaatgttctatgatgtgacacacattcgttagatact
tgagagtaagaatcctaacatgaacattttttggtattacattacacttc
aataaaaacaatgagaagcctatcatatactactttgcattctcctaact
aaatgctaccttcttgtattagatacaacacttttaaataaagcttacca
tgtaccactcccgtttactgacacactcatttgtctcctatatgctattt
ttctatgatcttcccgatgtatcaaatgatctgagtccatgacttgtaaa
tgtgca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttgctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagatgtgggaa
caaaacacccatggaaggagttacagaaacaagagtatggagctgagatg
aaaggatggaccatgtagagactgccatttccagggatccaccccataat
cagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chrX_125060606_125061675
seq2: B6Ng01-083J15.b_43_1098 (reverse)

seq1  TGCACATATATAAAGTCATGGAACACAAGAACATTTTGAGACATCGGGAA  50
      ||||||| ||  ||||||||| || | ||| || ||||| |||||||| |
seq2  TGCACATTTA-CAAGTCATGG-ACTC-AGATCA-TTTGATACATCGGG-A  45

seq1  AAATCATAGAAAAATAAGCATATAGGAAGAACAAATGAGTGTTGTAAGTT  100
      | ||||||||||||| |||||||||||   ||||||||||| ||| || |
seq2  AGATCATAGAAAAAT-AGCATATAGGA--GACAAATGAGTG-TGTCAG-T  90

seq1  AAAAGGGAGTGGGACATGGTAAGCTCTATTTAAAAAGTTGTTTTATCTAA  150
      ||| |||||||| |||||||||||| |||||||||   |||| |||||||
seq2  AAACGGGAGTGGTACATGGTAAGCTTTATTTAAAA--GTGTTGTATCTAA  138

seq1  TACAAAAAGGTAGCATTTAGTTAGGAGAATGCAAAGTAGTATATGATAGG  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAAGGTAGCATTTAGTTAGGAGAATGCAAAGTAGTATATGATAGG  188

seq1  CTTCTCATTGTTTTTTATTGAAGTGTAATGTAATACCAAAAAATGTTCAT  250
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATTG-TTTTTATTGAAGTGTAATGTAATACCAAAAAATGTTCAT  237

seq1  GTTAGGATTCCTACTCTCAAGTATCTAACGAATGTGTGTCACATCATAGA  300
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGATTCTTACTCTCAAGTATCTAACGAATGTGTGTCACATCATAGA  287

seq1  ACATTTTCATAGTGATAGCAAATTCCTTTATGCTGTCAATCTTTAACTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTTCATAGTGATAGCAAATTCCTTTATGCTGTCAATCTTTAACTCC  337

seq1  CAAAAGTAAGAAATAATCTGATTTATACCACCCTTGGTTAATTTGTTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTAAGAAATAATCTGATTTATACCACCCTTGGTTAATTTGTTTGC  387

seq1  TCTATTACTTATATAAATGGCATAATACAATATGTATTTTTCAAATTAGT  450
      ||||||||  | | |||    | ||  |  ||||||||||||||||||||
seq2  TCTATTAC-AAAAAAAAAAAAAAAACCCCGTATGTATTTTTCAAATTAGT  436

seq1  TCTTTCATTGAGCATCACTTATTGGTATGATTCACTTTGGTCTTGTGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCATTGAGCATCACTTATTGGTATGATTCACTTTGGTCTTGTGCTG  486

seq1  TAATATTTTGCCTATTTTCTTGCTAATTAGTTAGTTATGAATGGCTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTTTGCCTATTTTCTTGCTAATTAGTTAGTTATGAATGGCTGAGG  536

seq1  ATTCTTATAGATGATTACTAGTTTACTTATTCCCAAGAAAAGTTGATAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTATAGATGATTACTAGTTTACTTATTCCCAAGAAAAGTTGATAGC  586

seq1  AGTTTGAATGGGTTATTTAGAGAAACCTAGTTTCAAAGGATAGTAAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAATGGGTTATTTAGAGAAACCTAGTTTCAAAGGATAGTAAAGAT  636

seq1  TTAAATAAGCACGAGTTGGAGATGCATTGGAGTTAGAAGTAACACCAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATAAGCACGAGTTGGAGATGCATTGGAGTTAGAAGTAACACCAGAG  686

seq1  TAATCAAGGCTAACTAGAATCAAGAGTAACTCCAGGTTTTTGGTTTGCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAGGCTAACTAGAATCAAGAGTAACTCCAGGTTTTTGGTTTGCAC  736

seq1  AACTATAGCATGATAGTATTTGTCCTGTCTAAGTTTATGTCAACTTGGCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAGCATGATAGTATTTGTCCTGTCTAAGTTTATGTCAACTTGGCT  786

seq1  TAAGCTAAATGTATCTGGGAGGCTTCAACTTCAACTGAGAAACTACTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTAAATGTATCTGGGAGGCTTCAACTTCAACTGAGAAACTACTTCC  836

seq1  ATAGACCAGGATGTAGGCAAACTTGTAGGATTTTGTTGCTTTTTTGTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGACCAGGATGTAGGCAAACTTGTAGGATTTTGTTGCTTTTTTGTTGT  886

seq1  TGTTGTGAGTTTTTTTTTGTTTTTTTTTCTTTGTTTGTTTGTAGGGTGTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTGAGTTTTTTTTTGTTTTTTTTTCTTTGTTTGTTTGTAGGGTGTT  936

seq1  TTTGACTTATTGACTGATGGGGGCTTGTGGTCCTGGATTCTATAAGAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTTATTGACTGATGGGGGCTTGTGGTCCTGGATTCTATAAGAGAA  986

seq1  CAGTAAAGTGTACTCTATCATGGGTTCTGAATTATCTCCTATCCCTGAGG  1050
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGTAAAGTGTACTCTATCATGGGTTCTGAATTATCTCCCATCCCTGAGG  1036

seq1  TTGCTGCCCTGCTTGAATTC  1070
      ||||||||||||||||||||
seq2  TTGCTGCCCTGCTTGAATTC  1056

seq1: chr5_18084512_18084575
seq2: B6Ng01-083J15.g_386_449 (reverse)

seq1  TTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCC  50

seq1  TTCTTACCAGTTGG  64
      ||||||||||||||
seq2  TTCTTACCAGTTGG  64