BAC Information

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BAC

Clone NameB6Ng01-088B24
Chromosome5 (Build37)
Map Location 132,325,450 - 132,455,268
singlet/doubletdoublet
Overlap geneAuts2, 4930563F08Rik
Upstream geneWbscr17
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088B24.bB6Ng01-088B24.g
ACCDH901067DH901068
length944945
definitionDH901067|Mus musculus domesticus DNA, BAC clone: B6Ng01-088B24, 5' end.DH901068|Mus musculus domesticus DNA, BAC clone: B6Ng01-088B24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(132,325,450 - 132,326,379)(132,454,326 - 132,455,268)
sequence
gaattctctggaaagaaacatttcaacactgggtcctacgatgatatgtt
gggctttgatgccttttctggtgcagaatcttaatgtgcacttgttgctc
tgtctctaattcccctgatgagcgtggactctggagaaagaatgaagaaa
gaagaaaacataggggaagaggagaaaggctgcaggcagggctgcataca
caggaaaggcaggcatacaagacagggaagactgggtctggcccccatgc
tgatctggttcctgttttactgaagtgtttcactaggccccattgtcatc
aggttaaaaactcactgtgatgttaaaaggagtcatttcacagacacaga
agcaactaatgacagagcccctgcagcgcagactccaggtctgcatatat
cagcctctctgcatatatcaggtcctctccagattcggaagaattcttgt
aggttttagtattttcatgaaagactcagttgggtttgcctaataaccat
ttctgctgcgtttaacttcccactatgagctctccataggttgaatctac
ccaggactagaaatgttcagcatgcaagtaactttgagtctagagaatcc
ctttcttgatggggagaagtgtagttgcctatggtgacaacaggcagaga
ggtgacatgttctggtgcaggtagacctcatcagagctacctaaaagaca
aaggcatcttctttccaaagcagggaggaaggcatctagaacatgtaggg
gttgacaacactgaaggccttactgtgtttaactaatgaaggagttaatt
taagagtgtgtgacctgactgctctttctgaaaggtcctgagttcaaatc
ccagcaaccacatggtggcttcacagcccatccataaaggagatctgatt
gccctccttcttgggttgtctgaagaacagcttcagtgttactt
gaattcagtatgagccttctaattctgacaaacagaatattgatttttga
gtttgcggctgcaaatcctcaaaatgaaagtttcatggccttcctttcca
gtcgctactgatatatcttgagcaaacaaagtctgtatttaatagcagcc
tgctaattggaaagctacactaacttaacacagatgctgcaagtgagaag
ctgcaaagcaagcccgctgtgctcaaccagcaacaggataaaagctgcca
cctcgccaagctccccgagatgaacctgggaccttaaggaggctgtggcg
ctaattacctttagcatgtttaaactctaatttctcacttgtcagcgaaa
agcggggaactccttattggttggaacctgtcacacagcaacgtgtgaaa
agtaagaggcgtgaaggaaccctctagaccccacctccactaagactgct
gaggttttaaaaagaagatgacaggcagatagaattgtacttcagagaat
ggcatggggtggggaagggaggcccttggctttcattatcatcttttctc
tgtgcattcagactcataggcaaaggcaggcaagacatgaatttaagaaa
gcagccctcagatagacattaacagtaatcagtaatgctagtatgtgcaa
atggtggggccatcaccagcccaatctttgggaacattgtgatcatcaca
ggtagattcccatgaatttccctcatccatctggaccaaacctgggctgt
atccagaccagagaggaccagaatgagcatttggttggtgctggattcta
cccaaaaactttgtgcttataccttttccacgaggggacaactgctttga
aaacatagttaaatatggtgtgtttctctgtgtgtatatataatgtgtgt
cagtgaggaaaagtgcaggtggaatttgtaattatatggtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_132325450_132326379
seq2: B6Ng01-088B24.b_46_989

seq1  GAATTCTCTGGAAAGAAACATTTCAACACTGGGTCCTACGATGATATGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGGAAAGAAACATTTCAACACTGGGTCCTACGATGATATGTT  50

seq1  GGGCTTTGATGCCTTTTCTGGTGCAGAATCTTAATGTGCACTTGTTGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTTTGATGCCTTTTCTGGTGCAGAATCTTAATGTGCACTTGTTGCTC  100

seq1  TGTCTCTAATTCCCCTGATGAGCGTGGACTCTGGAGAAAGAATGAAGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTAATTCCCCTGATGAGCGTGGACTCTGGAGAAAGAATGAAGAAA  150

seq1  GAAGAAAACATAGGGGAAGAGGAGAAAGGCTGCAGGCAGGGCTGCATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAACATAGGGGAAGAGGAGAAAGGCTGCAGGCAGGGCTGCATACA  200

seq1  CAGGAAAGGCAGGCATACAAGACAGGGAAGACTGGGTCTGGCCCCCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGGCAGGCATACAAGACAGGGAAGACTGGGTCTGGCCCCCATGC  250

seq1  TGATCTGGTTCCTGTTTTACTGAAGTGTTTCACTAGGCCCCATTGTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGGTTCCTGTTTTACTGAAGTGTTTCACTAGGCCCCATTGTCATC  300

seq1  AGGTTAAAAACTCACTGTGATGTTAAAAGGAGTCATTTCACAGACACAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAAACTCACTGTGATGTTAAAAGGAGTCATTTCACAGACACAGA  350

seq1  AGCAACTAATGACAGAGCCCCTGCAGCGCAGACTCCAGGTCTGCATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACTAATGACAGAGCCCCTGCAGCGCAGACTCCAGGTCTGCATATAT  400

seq1  CAGCCTCTCTGCATATATCAGGTCCTCTCCAGATTCGGAAGAATTCTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTCTCTGCATATATCAGGTCCTCTCCAGATTCGGAAGAATTCTTGT  450

seq1  AGGTTTTAGTATTTTCATGAAAGACTCAGTTGGGTTTGCCTAATAACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTAGTATTTTCATGAAAGACTCAGTTGGGTTTGCCTAATAACCAT  500

seq1  TTCTGCTGCGTTTAACTTCCCACTATGAGCTCTCCATAGGTTGAATCTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGCTGCGTTTAACTTCCCACTATGAGCTCTCCATAGGTTGAATCTAC  550

seq1  CCAGGACTAGAAATGTTCAGCATGCAAGTAACTTTGAGTCTAGAGAATCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACTAGAAATGTTCAGCATGCAAGTAACTTTGAGTCTAGAGAATCC  600

seq1  CTTTCTTGATGGGGAGAAGTGTAGTTGCCTATGGTGACAACAGGCAGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGATGGGGAGAAGTGTAGTTGCCTATGGTGACAACAGGCAGAGA  650

seq1  GGTGACATGTTCTGGTGCAGGTAGACCTCATCAGAGCTACCTAAAAGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACATGTTCTGGTGCAGGTAGACCTCATCAGAGCTACCTAAAAGACA  700

seq1  AAGGCATCT--CTTCCAAAGCAGGGAGGAAGGCATCTAGAACATGTAGGG  748
      |||||||||   ||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATCTTCTTTCCAAAGCAGGGAGGAAGGCATCTAGAACATGTAGGG  750

seq1  GTTGACAACACTGAAGGCCTTACTGTGTTTAACTAATGAAGGAGTTAA-T  797
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTTGACAACACTGAAGGCCTTACTGTGTTTAACTAATGAAGGAGTTAATT  800

seq1  TAAGAGTGTGTGACCTGACTGCTC-TTCTG-AAGGTCCTGAGTTCAAATC  845
      |||||||||||||||||||||||| ||||| |||||||||||||||||||
seq2  TAAGAGTGTGTGACCTGACTGCTCTTTCTGAAAGGTCCTGAGTTCAAATC  850

seq1  CCAGCAACCACATGGTGGC-TCACAG-CCATCCAT-AAGGAGATCTGA-T  891
      ||||||||||||||||||| |||||| |||||||| |||||||||||| |
seq2  CCAGCAACCACATGGTGGCTTCACAGCCCATCCATAAAGGAGATCTGATT  900

seq1  GCCCT-CTTCT--GGGTGTCTGAAG-ACAGCTACAGTG-TACTT  930
      ||||| |||||  || ||||||||| |||||| ||||| |||||
seq2  GCCCTCCTTCTTGGGTTGTCTGAAGAACAGCTTCAGTGTTACTT  944

seq1: chr5_132454326_132455268
seq2: B6Ng01-088B24.g_68_1012 (reverse)

seq1  ACACACACCATATAA-TACAAA-TCCACCTGCACTTTTCCTCACTGACAC  48
      |||| |||||||||| |||||| |||||||||||||||||||||||||||
seq2  ACAC-CACCATATAATTACAAATTCCACCTGCACTTTTCCTCACTGACAC  49

seq1  ACATTATATATACACACAGAGAAACACACCATATTTAACTATTGTTTTCA  98
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACATTATATATACACACAGAGAAACACACCATATTTAACTA-TGTTTTCA  98

seq1  AAGCAGTTGTCCCCTCGTGG-AAAGGTATAAGCACAAAGTTTTTGGGTAG  147
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAGCAGTTGTCCCCTCGTGGAAAAGGTATAAGCACAAAGTTTTTGGGTAG  148

seq1  AATCCAGCACCAACCAAATGCTCATTCTGGTCCTCTCTGGTCTGGATACA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAGCACCAACCAAATGCTCATTCTGGTCCTCTCTGGTCTGGATACA  198

seq1  G-CCAGGTTTGGTCCAGATGGATGAGGGAAATTCATGGGAATCTACCTGT  246
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGTTTGGTCCAGATGGATGAGGGAAATTCATGGGAATCTACCTGT  248

seq1  GATGATCACAATGTTCCCAAAGATTGGGCTGGTGATGGCCCCACCATTTG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCACAATGTTCCCAAAGATTGGGCTGGTGATGGCCCCACCATTTG  298

seq1  CACATACTAGCATTACTGATTACTGTTAATGTCTATCTGAGGGCTGCTTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACTAGCATTACTGATTACTGTTAATGTCTATCTGAGGGCTGCTTT  348

seq1  CTTAAATTCATGTCTTGCCTGCCTTTGCCTATGAGTCTGAATGCACAGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAATTCATGTCTTGCCTGCCTTTGCCTATGAGTCTGAATGCACAGAG  398

seq1  AAAAGATGATAATGAAAGCCAAGGGCCTCCCTTCCCCACCCCATGCCATT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATGATAATGAAAGCCAAGGGCCTCCCTTCCCCACCCCATGCCATT  448

seq1  CTCTGAAGTACAATTCTATCTGCCTGTCATCTTCTTTTTAAAACCTCAGC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAAGTACAATTCTATCTGCCTGTCATCTTCTTTTTAAAACCTCAGC  498

seq1  AGTCTTAGTGGAGGTGGGGTCTAGAGGGTTCCTTCACGCCTCTTACTTTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAGTGGAGGTGGGGTCTAGAGGGTTCCTTCACGCCTCTTACTTTT  548

seq1  CACACGTTGCTGTGTGACAGGTTCCAACCAATAAGGAGTTCCCCGCTTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACGTTGCTGTGTGACAGGTTCCAACCAATAAGGAGTTCCCCGCTTTT  598

seq1  CGCTGACAAGTGAGAAATTAGAGTTTAAACATGCTAAAGGTAATTAGCGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGACAAGTGAGAAATTAGAGTTTAAACATGCTAAAGGTAATTAGCGC  648

seq1  CACAGCCTCCTTAAGGTCCCAGGTTCATCTCGGGGAGCTTGGCGAGGTGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCTCCTTAAGGTCCCAGGTTCATCTCGGGGAGCTTGGCGAGGTGG  698

seq1  CAGCTTTTATCCTGTTGCTGGTTGAGCACAGCGGGCTTGCTTTGCAGCTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTTTTATCCTGTTGCTGGTTGAGCACAGCGGGCTTGCTTTGCAGCTT  748

seq1  CTCACTTGCAGCATCTGTGTTAAGTTAGTGTAGCTTTCCAATTAGCAGGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTGCAGCATCTGTGTTAAGTTAGTGTAGCTTTCCAATTAGCAGGC  798

seq1  TGCTATTAAATACAGACTTTGTTTGCTCAAGATATATCAGTAGCGACTGG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATTAAATACAGACTTTGTTTGCTCAAGATATATCAGTAGCGACTGG  848

seq1  AAAGGAAGGCCATGAAACTTTCATTTTGAGGATTTGCAGCCGCAAACTCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGCCATGAAACTTTCATTTTGAGGATTTGCAGCCGCAAACTCA  898

seq1  AAAATCAATATTCTGTTTGTCAGAATTAGAAGGCTCATACTGAATTC  943
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCAATATTCTGTTTGTCAGAATTAGAAGGCTCATACTGAATTC  945