BAC Information

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BAC

Clone NameB6Ng01-088I03
Chromosome5 (Build37)
Map Location 18,084,511 - 18,084,576
singlet/doubletsinglet
Overlap genenone
Upstream geneSema3c, Cd36, Gnat3, Gnai1, LOC100041818, LOC668167
Downstream gene4921504A21Rik, Magi2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088I03.bB6Ng01-088I03.g
ACCDH901340DH901341
length9901,248
definitionDH901340|Mus musculus domesticus DNA, BAC clone: B6Ng01-088I03, 5' end.DH901341|Mus musculus domesticus DNA, BAC clone: B6Ng01-088I03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaactgaggaatacctaagggctgagaagcacttgaaaaaatg
ctcaacatccttaatcaacagtgaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagctggtacaaccactctggaaattagtctggcagttcctca
gaaaactggacatggtactacgggaagatccagcaattcctctcctgggc
atatacccagaagatgctccaactggtaataaggacacatgctccactat
gctcatagcagccctatttataatagccagaagctggaaagaacttagat
gtccctcaaccaaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagaaattaaaaacaatgaatttacgaaattcttaggcaa
atggatgtatctggagaatatcatcctgagtgaggtaacccaatcacaaa
agaacacacatggtatgcactcactgataagcagatattatcccagaaac
ttagaatagccgagatacaatttccaaaacacatgaaactcaagaagaag
gaagacccaggtgtgaatacttcattccttcttagaatggggaataaaat
acccatggaaggagttacagagaaaaagttcagagctgagatggaaggaa
ggaccattcagggactaccccacccggggatccatcccatatacaagcac
caaacccagacactatatcagaaacattttgctgataggaccctgacatc
tctctctcttgtgagtctatgccaatgcctggcaaatatagaagtggatg
ctcacagtcatcttttggatggaacacagggcccctaatgaaggagctag
agaaagtacccaaggatctaaaggggtctgcaccctatag
gaattcctaaacctgataaacagcttcggtgaagtagctggatataaaat
taacacaaacaagccaatgacctttctttacacaaagaataaacaggctg
agaaagaaattggggaaacaacaccattctcaatagtcacaaataatata
aagtatcttggcgtgactctaactaaggaagtgaaagatctgtatgacaa
gaacttcaagtctctgaagaaagaaattaaagaagatctcagaagatgga
aagatctcccagctcatggattggcaggatcaacattgtaaaaatagcta
tcttgccaaaagcaatctacagatacaatgcaatccccatcaaaattcca
actcaattcttcaatgaattagaaagagcaatctgcaaattcatctggaa
tgacaaaaaacctaggatagcaaaaactcttctcaaggataaaagaacct
ctggtggaatcaccatgcctgacccaaagctttactacagagcaattgtg
ataaaaactgcatggtactggtatagagacagacaagtagaccaatggaa
tagaattgaagacccagaaatgaacccacacacctatggtcacttgatct
tcgacaagggagctaaaaccatccagtggaagaaagacagcattttcaac
aaatggtgctggcacaaatggttgttatcatgtagaagaacgagaattga
tccattcctatctccttgtactaaggtcaaatctaagtggatcaaggaac
ttcacataaaaccagagacactgaaacttatagaggagaaagtcgggtag
agcctcaaagatatgggcacagggggaaaattcctgaatagaacagcaat
ggcttgtgctgtaagatcgagaattgacaaatgggacctcatgaaactgc
aaagcttctgcaaggcaaaagacaccgtcatagacaaaaaggccaccaca
gattgggaaaggatctttacctatcctaaatcagataggggctaatatcc
aatatatataaagactcaggagtgtacttcagaaatccataactccatta
aatggggctccgagctaacaagattttactgagaatccgaatggccggaa
cccctggaaaatgcttacctctatcctcgagaaatgcatcaacaacctgg
agatcacctccaccagtcgaatggctgagtcaattcgggtaccgagtcgc
agattgaaggaacctctccatgtttgtgaatccggttgtactcactct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_18084511_18084576
seq2: B6Ng01-088I03.b_365_430 (reverse)

seq1  CTTCTGGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTC  50
      ||||||||||||||||||| ||||||||||| ||||||||||||||||||
seq2  CTTCTGGCTATTATAAATAGGGCTGCTATGAGCATAGTGGAGCATGTGTC  50

seq1  CTTCTTACCAGTTGGA  66
      ||| ||||||||||||
seq2  CTTATTACCAGTTGGA  66