BAC Information

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BAC

Clone NameB6Ng01-089O15
Chromosome5 (Build37)
Map Location 152,517,853 - 152,518,916
singlet/doubletsinglet
Overlap genenone
Upstream geneAprin, LOC100040180, Kl, LOC667510, Stard13, LOC630708, LOC625175, LOC100042166, EG435877, EG632649, EG632671, Rfc3
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089O15.bB6Ng01-089O15.g
ACCDH902363DH902364
length1,0471,237
definitionDH902363|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O15, 5' end.DH902364|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatccacattactttttttattaaaggacaaaagatgactataa
tcttctttgtctgccatgaggaaatatcacagaccacagggttaaacaac
atttagtttcttttctaaaattatttatttatttatttatttacatccat
gtgaatgtatgttatgtgcattttggggaaggccagatcccctgggctgg
agttacaagcagtttggagacatctaatgtgggttctgggaactgaactt
tgatcccttggaaagcagcaactgttcttattgactgagccatctttcca
gctttttccttactaagtctctagtaacaatgtggtttggctttgcctgg
gatttccaactgtaagaggcctttatacagaagttcaagtgtgtctgtgt
tgtgctaaagagttctccattatcttgtagacatccaattttgatggtga
acataccatctactctccacccacaatgtgactttacccagtattcatgg
atatcagatacaatcctggattggaattctgagagtaaattagtgcaaat
caaagacgtggtggttgtggtgatggaaccttctattttctacagtttta
ctagtagactggggaaaaaaaaacattctgtagaatgccagattctacgt
ccatcaagatctctagtcacacatgaacccacagagactgtgatagcatg
aacaagacctgcataggtttaaaccagataaaaccccagcactgtgaggg
gaagtgagcccaaagtcccacccctaactgagaagctatttacaataaat
gccctgggaaaaggaaatcagctttctataatatggtgtcactgtggatt
tcaactacacctcaggccttttgggtgggcaggaaggtggggaagatctg
ggagaatggatgagaggaaaatataataaatatattgtatagaaatttaa
taagtatgaaagaaagaagagtctatcagtgtgttagcaaaactcaaatc
ccttgctatgcacttaaagccattttttaaaaaaagaaaaagaatta
gaattctttgctaaaacaatccgtctctggaatattttcctttgagagat
gtttagtgaatccttctattcttcagtgtttaagaggttattagcttgtt
tatccaaccttgatttaactttgataagttttttcttacacaaaaactgt
ccatttcacttatatttttcaattttgtggagtacatgtttttgaagtaa
gatctattggctctttacgtttccttggtgtctcttgttatatccctttt
tccatttctaattgtgtcaatttggatattgtgtctgttgattttctcaa
agaaccagcactttgtttcattgtttctttgtattcttctctttgttttc
atgttaagaattttattattgactttgttatttcctgctgtctactccag
gtggctgtgtttgcttctttttgtctagagctttcagatgtgctgttaaa
tgcctagtacaggatctctccaacttctttatgaaggcacttactgctat
gaactttcctctgagcagctcttttgttgtgtctcaaaagttttgggatg
ttgtgccttcattttcattgaattctagaaagtcttttatttctttgtct
cttccttgacctagatgtcattaagtagtgattcagttccaaaaatttgt
aggcgttctgttttgttttgttttgtttttctgttgttgttgaagtcctg
atttaatccattgtgatctgataagattcagggtttatttcattttcttg
tatatgctgggtattgttttgtgaacaagtaaatatggtcagttttgaaa
gaggttccatgatgagctcagaaaggggaatattattttgtgtttttgtg
aaatgttctctggatatctgttaggttcaattgagtaataacatttgtag
ttcgattatttttgtttagttttgtcaattgtgacctgtcgtgtggagaa
gtgaggtattgaagtcaccccactctaatgtgtgggtttgaatgcgtaat
ttaaggtttaatgacttttttttacaacatgtatacctctgcacttgtaa
cctgaattatttagattagaaaacatcatcctcatttattttcccttgat
gaatgtaagtgtcctttccacctttggtaattgctgagagacaattttat
agacacatcatgttcaccaactcggtctggaaacagatgactcggcaaat
attattcagccctctaactcctgtagagggacagctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_152517853_152518916
seq2: B6Ng01-089O15.b_48_1094 (reverse)

seq1  TAATTACTTTTTCTTTTTTTTAAAAAAATGGGCTTTTAAGTGCCTTAGCA  50
      ||||| ||||||||||||||  |||||||||   |||||||| | |||||
seq2  TAATT-CTTTTTCTTTTTTT--AAAAAATGG--CTTTAAGTG-CATAGCA  44

seq1  AGGGATTTTGAGTTTTTGCTAACACACTGATTAGACTTCTCTTTTCTTTT  100
      ||||| |||||| ||||||||||||||||| ||||| |||  ||||||| 
seq2  AGGGA-TTTGAG-TTTTGCTAACACACTGA-TAGAC-TCTTCTTTCTTTC  90

seq1  ATACTTTATTAAATTTCTATACAATATATTTTGATTATATTTTTCCTCTC  150
      |||| ||||||||||||||||||||||||||  |||||| ||||||||||
seq2  ATAC-TTATTAAATTTCTATACAATATATTT--ATTATA-TTTTCCTCTC  136

seq1  ATCCAATTCCTCCCAGATCTTCCCCACCTTCCTGCCCACCAAAAGGCCCT  200
      |||||  | ||||||||||||||||||||||||||||||| ||| | |||
seq2  ATCCA--TTCTCCCAGATCTTCCCCACCTTCCTGCCCACCCAAAAGGCCT  184

seq1  GAGGTGTAGTTGAAATCCACAGTGACACCATATTATAGAAAGCTGATTTT  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GAGGTGTAGTTGAAATCCACAGTGACACCATATTATAGAAAGCTGA-TTT  233

seq1  CCTTTTCCCAGGGCATTTATTGTAAATAGCTTCTCAGTTAGGGGTGGGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTCCCAGGGCATTTATTGTAAATAGCTTCTCAGTTAGGGGTGGGAC  283

seq1  TTTGGGCTCACTTCCCCTCACAGTGCTGGGGTTTTATCTGGTTTAAACCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGCTCACTTCCCCTCACAGTGCTGGGGTTTTATCTGGTTTAAACCT  333

seq1  ATGCAGGTCTTGTTCATGCTATCACAGTCTCTGTGGGTTCATGTGTGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGTCTTGTTCATGCTATCACAGTCTCTGTGGGTTCATGTGTGACT  383

seq1  AGAGATCTTGATGGACGTAGAATCTGGCATTCTACAGAATGTTTTTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATCTTGATGGACGTAGAATCTGGCATTCTACAGAATGTTTTTTTTT  433

seq1  CCCCAGTCTACTAGTAAAACTGTAGAAAATAGAAGGTTCCATCACCACAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTCTACTAGTAAAACTGTAGAAAATAGAAGGTTCCATCACCACAA  483

seq1  CCACCACGTCTTTGATTTGCACTAATTTACTCTCAGAATTCCAATCCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACGTCTTTGATTTGCACTAATTTACTCTCAGAATTCCAATCCAGG  533

seq1  ATTGTATCTGATATCCATGAATACTGGGTAAAGTCACATTGTGGGTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATCTGATATCCATGAATACTGGGTAAAGTCACATTGTGGGTGGAG  583

seq1  AGTAGATGGTATGTTCACCATCAAAATTGGATGTCTACAAGATAATGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATGGTATGTTCACCATCAAAATTGGATGTCTACAAGATAATGGAG  633

seq1  AACTCTTTAGCACAACACAGACACACTTGAACTTCTGTATAAAGGCCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTTAGCACAACACAGACACACTTGAACTTCTGTATAAAGGCCTCT  683

seq1  TACAGTTGGAAATCCCAGGCAAAGCCAAACCACATTGTTACTAGAGACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTGGAAATCCCAGGCAAAGCCAAACCACATTGTTACTAGAGACTT  733

seq1  AGTAAGGAAAAAGCTGGAAAGATGGCTCAGTCAATAAGAACAGTTGCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGGAAAAAGCTGGAAAGATGGCTCAGTCAATAAGAACAGTTGCTGC  783

seq1  TTTCCAAGGGATCAAAGTTCAGTTCCCAGAACCCACATTAGATGTCTCCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAAGGGATCAAAGTTCAGTTCCCAGAACCCACATTAGATGTCTCCA  833

seq1  AACTGCTTGTAACTCCAGCCCAGGGGATCTGGCCTTCCCCAAAATGCACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCTTGTAACTCCAGCCCAGGGGATCTGGCCTTCCCCAAAATGCACA  883

seq1  TAACATACATTCACATGGATGTAAATAAATAAATAAATAAATAATTTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATACATTCACATGGATGTAAATAAATAAATAAATAAATAATTTTAG  933

seq1  AAAAGAAACTAAATGTTGTTTAACCCTGTGGTCTGTGATATTTCCTCATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAACTAAATGTTGTTTAACCCTGTGGTCTGTGATATTTCCTCATG  983

seq1  GCAGACAAAGAAGATTATAGTCATCTTTTGTCCTTTAATAAAAAAAGTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAAAGAAGATTATAGTCATCTTTTGTCCTTTAATAAAAAAAGTAA  1033

seq1  TGTGGATGGAATTC  1064
      ||||||||||||||
seq2  TGTGGATGGAATTC  1047