BAC Information

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BAC

Clone NameB6Ng01-090M03
Chromosome5 (Build37)
Map Location 46,820,323 - 46,821,378
singlet/doubletsinglet
Overlap genenone
Upstream geneQdpr, EG624224, Lap3, LOC100040762, Med28, 9630031F12Rik, 9630001P10Rik, 1600023N17Rik, Lcorl, LOC100041576, EG666103
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-090M03.bB6Ng01-090M03.g
ACCDH902975DH902976
length1,051655
definitionDH902975|Mus musculus domesticus DNA, BAC clone: B6Ng01-090M03, 5' end.DH902976|Mus musculus domesticus DNA, BAC clone: B6Ng01-090M03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgtgtattaattatctactttctgtcagacattatgttattat
acaaacaaagtagatagattaagagttataaagatgcccatattttaatc
cccaaatttgtccatttggcaaaagggatattgtagatgtgatcaaggta
aatatcttgaatgagacaattattctgtattaatcaggcaaaccaaatag
aatgacaagggtcttcatagtgaaaggccagaggtcaaagctcagaaata
cagatgtgaaagtatgtttcacatacagaatttaaagtatggagtttaaa
gctatgtactttgaacatggagggtaatgatcatgtaccatggaatgctg
gtggcccttgtaagatgggaagaaatgcatgtggagcctctccaagcagt
ccctcatgagaagcacaggtctgataatacctccacttttaacctgttaa
gactcaagttgtttgtcccacctcctgaactttaaagtaaccaattcata
ttattttaagccacaaactttttggttatttatgatgacagctatgtgaa
ggtatactttagtaaactaaagaactattgttgagaaaacagggatgggt
ggtaaactgatgtagtggatttaaatgcaaatatttttgaattaattttt
tttctttttttttaattgggtatttttttcatttacatttccaatgctat
cccaaaagtcccccacccactcccccacccacccactcccacttcttggc
cctgtcgttcccctgtactgcggcatataaagtttgcatgactaatgggc
ctctcttttcactgatggccgactaggccattttctgattcatatgcagc
tagagacacgagctccaggggggtactgggttagttcatattgttgttca
cctataggattgcagatcccttagctccttgggtacttctctagctcctc
cactgggggccctgtgatccatccatagctgactgtgagcatccaattct
gagtctggactttataaaagtagagtgaagtatgtaatagagctaaccta
g

gaattctcttatctcgaccaacgtagaatcccacttactgaataggattt
tattgttgttgatgattttatttggctttattattattattattattatt
attatatcatcactactaatactactattattactcctcctctaatgggc
gtgcatctgtgtgtgtgtgtgtgtgtgtgtgtgtttgcctgtctgtctgt
ctgttgtgtatatgtgcgtgtgtgtagtgtgtagacatttacctgtcaca
gcacagatgtggagataagacaaccttcaagagtcagttttcttcttcta
atgtgggttctgtgtattagaccactggtcattatgctgtgtggcatact
tcagtccttcttagaaggggtatctaaatacccatggaaggagttgcaga
gataaagtgtggaacagagactgaagaaaaggccattcagagactgtccc
acctggggaccatcctataaacaaccaccaaacccaaacactattgatga
tgccaagaagtgcttcctgacaggagcctgataaagctgtctcctgtgag
actctgccagatcctagtcaatacagatttggatgctcacagccaaccat
cgaactgaacacagtgaaccccatggaggatttatgtgaaagactgaaat
aactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_46820323_46821378
seq2: B6Ng01-090M03.b_48_1098

seq1  GAATTCATGTGTATTAATTATCTACTTTCTGTCAGACATTATGTTATTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTGTATTAATTATCTACTTTCTGTCAGACATTATGTTATTAT  50

seq1  ACAAACAAAGTAGATAGATTAAGAGTTATAAAGATGCCCATATTTTAATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAGTAGATAGATTAAGAGTTATAAAGATGCCCATATTTTAATC  100

seq1  CCCAAATTTGTCCATTTGGCAAAAGGGATATTGTAGATGTGATCAAGGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATTTGTCCATTTGGCAAAAGGGATATTGTAGATGTGATCAAGGTA  150

seq1  AATATCTTGAATGAGACAATTATTCTGTATTAATCAGGCAAACCAAATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTTGAATGAGACAATTATTCTGTATTAATCAGGCAAACCAAATAG  200

seq1  AATGACAAGGGTCTTCATAGTGAAAGGCCAGAGGTCAAAGCTCAGAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACAAGGGTCTTCATAGTGAAAGGCCAGAGGTCAAAGCTCAGAAATA  250

seq1  CAGATGTGAAAGTATGTTTCACATACAGAATTTAAAGTATGGAGTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGAAAGTATGTTTCACATACAGAATTTAAAGTATGGAGTTTAAA  300

seq1  GCTATGTACTTTGAACATGGAGGGTAATGATCATGTACCATGGAATGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTACTTTGAACATGGAGGGTAATGATCATGTACCATGGAATGCTG  350

seq1  GTGGCCCTTGTAAGATGGGAAGAAATGCATGTGGAGCCTCTCCAAGCAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCCCTTGTAAGATGGGAAGAAATGCATGTGGAGCCTCTCCAAGCAGT  400

seq1  CCCTCATGAGAAGCACAGGTCTGATAATACCTCCACTTTTAACCTGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATGAGAAGCACAGGTCTGATAATACCTCCACTTTTAACCTGTTAA  450

seq1  GACTCAAGTTGTTTGTCCCACCTCCTGAACTTTAAAGTAACCAATTCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAAGTTGTTTGTCCCACCTCCTGAACTTTAAAGTAACCAATTCATA  500

seq1  TTATTTTAAGCCACAAACTTTTTGGTTATTTATGATGACAGCTATGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTAAGCCACAAACTTTTTGGTTATTTATGATGACAGCTATGTGAA  550

seq1  GGTATACTTTAGTAAACTAAAGAACTATTGTTGAGAAAACAGGGATGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATACTTTAGTAAACTAAAGAACTATTGTTGAGAAAACAGGGATGGGT  600

seq1  GGTAAACTGATGTAGTGGATTTAAATGCAAATATTTTTGAATTAATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACTGATGTAGTGGATTTAAATGCAAATATTTTTGAATTAATTTTT  650

seq1  TTTCTTTTTTTTTAATTGGGTATTTTTTTCATTTACATTTCCAATGCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTTTTTAATTGGGTATTTTTTTCATTTACATTTCCAATGCTAT  700

seq1  CCCAAAAGTCCCCCACCCACTCCCCCACCCACCCACTCCCACTTCTTGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAAGTCCCCCACCCACTCCCCCACCCACCCACTCCCACTTCTTGGC  750

seq1  CCTGTCGTTCCCCTGTACTGCGGCATATAAAGTTTGCATGACTAATGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCGTTCCCCTGTACTGCGGCATATAAAGTTTGCATGACTAATGGGC  800

seq1  CTCTCTTTTCACTGATGGCCGACTAGGCCATTTTCTGATTCATATGCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTTCACTGATGGCCGACTAGGCCATTTTCTGATTCATATGCAGC  850

seq1  TAGAGACACGAGCTCCAGGGGGGTACT-GGTTAGTTCATATTGTTGTTCC  899
      ||||||||||||||||||||||||||| |||||||||||||||||||| |
seq2  TAGAGACACGAGCTCCAGGGGGGTACTGGGTTAGTTCATATTGTTGTT-C  899

seq1  ACCTATAGGATTGCAGATCCCTTTAGCTCCTTGGGTACTTTCTCTAGCTC  949
      ||||||||||||||||||||| |||||||||||||||| |||||||||||
seq2  ACCTATAGGATTGCAGATCCC-TTAGCTCCTTGGGTAC-TTCTCTAGCTC  947

seq1  CTCCACTGGGGGCCCTGTGATCCATCCAATAGCTGACTGTGAGCATCCAA  999
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTCCACTGGGGGCCCTGTGATCCATCC-ATAGCTGACTGTGAGCATCCAA  996

seq1  TTCTGAGTCTGGACTTTATTAAAAAGTAGAGTGAAGTATGTAATAGAGCT  1049
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  TTCTGAGTCTGGACTTTAT--AAAAGTAGAGTGAAGTATGTAATAGAGCT  1044

seq1  AACCTAG  1056
      |||||||
seq2  AACCTAG  1051


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