MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-090O08
Chromosome	5 (Build37)
Map Location	85,242,534 - 85,243,682
singlet/doublet	singlet
Overlap gene	none
Upstream gene	LOC231368, Epha5, LOC100039489
Downstream gene	none
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC231368 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:231368
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Epha5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13839 MGI:99654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039489 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 795 ESTs, 11 Proteins

name	Epha5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111154064 GeneID:13839 MGI:99654
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Eph receptor A5 transcript_id : NM_007937.2

name	LOC100039489 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149253984 GeneID:100039489
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 10 mRNAs, 795 ESTs, 11 Proteins product : similar to Hmgn2 protein transcript_id : XM_001473104.1

name	Epha5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111154065 CCDS:CCDS19376.1 GeneID:13839 MGI:99654
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005003 - ephrin receptor activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : eck-like sequence 1 product : Eph receptor A5 protein_id : NP_031963.2

name	LOC100039489 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149253985 GeneID:100039489
definition	codon_start : 1 product : similar to Hmgn2 protein protein_id : XP_001473154.1

name	LOC231368 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231368
definition	number : 1 pseudo : _no_value

name	LOC231368 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:231368
definition	number : 2 pseudo : _no_value

clone name	MSMg01-181P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-277K04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-232B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306D08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-102C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062L08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093L23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454C06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059J12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-116K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528D16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526O11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507L06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-533A07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183M09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340L12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157A01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-413B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-416M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-213D01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189M06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365L21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-213M14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404C17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458A02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-377G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-268N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-294N23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-452O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-189F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529N02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-164L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-301J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-477K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-137J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-090P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484O04
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-189M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-110E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386J07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-330N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-118L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-153J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-420A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-185G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-447I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-050H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-492H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141J24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-473J11
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-304D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073H09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-075P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-010I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057A18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-216A17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-236N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078H23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-152C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186B03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-063B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-297I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289C22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160H04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-337G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-203H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-243N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323M13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-129B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-224N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074H22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-288L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134M05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250C23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-091K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-141I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307J11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-027P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-031B16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249G02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-206F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207G14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-166I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-020N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296N01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-038E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-093O23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-051F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-286H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312H06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-251P22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118O19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294K12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-067B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-065D24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182N08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-199E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-295F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-160A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-037A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-188H18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-342D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-014F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087A10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-169L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-261C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-191L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-346C09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-087J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152B13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-090O08.b	B6Ng01-090O08.g
ACC	DH903075	DH903076
length	1,230	1,133
definition	DH903075\|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O08, 5' end.	DH903076\|Mus musculus domesticus DNA, BAC clone: B6Ng01-090O08, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattctttattttttaattaattaattcatttctttactttttttaact ccagattttatttcccaccccctggtccaccctctgagactcttccacat cacatacctcctcccctcacccctgtctccatgaagctgtatcaactcct cacccccaccccacctgacctctaaactcactgggatctccagtatcttg aggattaagtgcatcatctctgattgaacacagttctggcagtcctctgc tatagatggattgggggcctcatatcagctgatttatgctacctggttga tggtcccagtgattgggagatctcaggggtccagattaattgagactgct tgttctcttacagggttgccctcctcctcagcttcttccagcctttccct aattcaacaacaggggtcagaagcttctgtccattggttgggtgcaaata tctgcatctaactctttcagctgcttgttgagtcttccagagtgtggcca ttcaaagtcccttttgtgagctctccatagcctcagtaatagtctcaggc cttgggacctctccttgagttggatcccactttgggcccgtgggtggacc ttcttttccttaggctcctctccatttctatccctgcagttctttcagcc aggaacaattgtgggtgagagttttgactgtgggtagtaacaccttccct caattgataccctgtctttctacttgaggtggtctttataagttccctct ccctactgctggcaatatcatctaagattcctctttttgagtcctgatag tgtctcacctcccagatctctggttcattctggagggtccccaaaatctc ctaactcccgaggctgcctgtttccattctttctgctggccctcaggctt aagtccttttccctcactcactaccagatcagtttccatcttcctcccaa atccccacattttactcccaggtccctcctctcttcccactagtggttgc tttcttctccagttggactgagcatcttttagcttgtgaccttttggagt tctgtagactgatctggatagtctgtacttttttttggctaatatcaact tattatggagttatacatgcatgtcttaagcctcagtacctcacctcaga atgatttcagtctaacattgctgcacctgagttctacttcttataggata gatcattgtattggaccgactctcgctgac	gaattcatatggctcataaaaaattgtcataaagcacaaatatcttttat gaatgagaaaaggataaattaactaataattctatttcccctcaaaaaga gtaacaaaacattaattcattacttcattacttaaaatgatatatgggtt agaatttttcattctctaagtatcaatagttgacaatagcattgaacaag agtattggagtgcccacattccaacttaaaataaatattttgatttgtat atattttcaacatcatgaaattatttcataaaactggaaacccataatta aaatgctaaattaaggaaaactaatataaacttaatgtatatattctcaa agtaatgttgtttgtcatgattataagctctatcaaaaaggtcattgttt catttgttgactaaataattttaataggcatattataattaatattcatt tcaaaataaatgcagactgaatctgagttaatttttcttacataaatcca ttttctaattttaatcattactatcatatattttatactttcacatacag tgaatttgcaatgacatgttataccttctattatgtaatcatgagccact tgtagatattaacataaaatataaactgtacatttgttttacagttaaat attcttgaatatgcagatagctatcttttatatttatatatgtttatcaa tttttgatctacactatgttgcatcattttatttactatttaatactttt ctgaatttaacaaaggtttgattttatttgttaaaactattacatgtata tacaatgaagtacattcacctgacacaactggccccacttgctccggccc aaagacttaattattatatctaagtacactgtagctatcttcagacacac cagaagagggtgtcagattccattatggatggttgtgagccgccatgtgg ttgctcgaatttgaactcagaccttctaagagcagtcagtgctcttagca ttgagcatcttctcatccctcaacatctagattatatggctaatcttgtg aaattggtgggctatcataagctgctacttctgcaagctacattagccct gtcagttcagggaataacttacagaactcctca
quality values	Open. Hide. 61 47 35 37 61 61 61 61 47 61 61 55 55 61 61 49 52 61 61 47 61 61 61 59 61 18 17 12 13 7 18 36 36 30 28 30 44 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 59 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 59 61 37 35 35 28 44 59 61 61 61 61 61 61 55 55 55 55 55 59 61 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 37 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 44 44 37 55 61 61 59 59 59 59 61 59 55 55 59 61 61 59 61 59 61 61 61 59 55 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 59 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 52 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 52 53 61 61 47 61 61 61 57 57 47 32 57 57 57 57 57 57 57 57 57 53 53 57 57 57 57 57 45 53 57 47 47 57 57 57 57 57 57 53 52 53 47 47 50 53 57 57 57 57 57 47 35 57 57 57 53 53 57 57 57 45 53 57 47 53 24 57 50 57 53 57 53 53 52 52 39 34 53 57 57 52 45 53 53 53 47 47 53 57 50 53 52 50 57 53 50 57 53 45 42 35 52 40 32 40 57 52 47 45 50 57 53 57 57 41 57 57 47 50 57 46 50 57 42 45 57 57 52 34 53 37 53 53 42 52 57 57 35 47 37 36 57 50 52 38 52 53 53 57 34 34 41 38 42 40 41 37 57 53 48 42 44 33 57 53 35 57 32 47 44 57 38 44 40 40 42 47 53 52 40 20 40 22 57 52 28 42 29 57 38 40 30 9 57 24 45 53 30 39 37 53 37 41 29 57 44 34 33 30 36 47 37 41 48 41 33 43 45 36 37 29 29 35 31 31 30 30 39 19 47 17 33 30 38 35 44 32 46 46 51 48 32 47 32 35 28 30 29 47 33 31 39 35 28 32 25 29 29 29 29 25 29 31 29 39 17 29 25 47 28 28 29 28 29 25 36 23 29 28 28 18 29 33 29 36 29 36 20 46 34 21 29 39 26 19 22 31 33 29 29 28 28 23 23 29 27 23 29 29 35 41 24 24 43 46 29 23 29 29 22 26 28 33 14 46 29 17 29 16 15 24 29 26 39 29 22 26 29 22 28 36 30 18 39 18 25 20 23 21 33 7 15 19 29 14 25 31 16 26 28 51 46 29 21 41 11 8 17 24 23 29 20 21 26 23 31 21 18 20 31 30 24 21 6 8 6 44 23 23 28 28 27 31 28 31 19 22 29 13 28 13 18 32 22 27 21 38 38 17 9 6 9 20 51 51 24 16 32 13 13 32 12 24 21 28 19 13 44 19 28 33 25 8 8 10 6 5 22 17 37 9 14 22 20 28 9 12 15 29 13 11 22 14 20 35 14 11 18 6 6 15 27 29 23 18 23 12 17 20 30 19 29 31 10 12 10 23 11 14 6 42 42 25 29 16 31 18 14 23 14 8 20 16 13 26 37 37 30 11 6 5 7 23 8 14 9 21 5 4 4 20 12 6 5 3 3 4 22 7 11 13 7 14 13 7 29 7 9 4 9 9 23 32 36 35 31 32 18 6 3 12 15 14 24 13 6 14 5 19 5 8 13 15 14 6 7 4 13 6 24 5 11 5 5 9 12 8 8 13 4 4 8 7 10 9 17 4 6 4 4 6 4 18 9 9 4 7 13 6 7 9 20 18 5 5 3 6 5 8 9 4 18 4 4 3 4 8 3 13 15 4 2 3 8 5 6 12 5 17 6 18 17 5 14 3 5 3 4 3 7 3 2 4 5 4 7 14 4 7 5 20 4 5 11 4 5 1 7 6 6 11 3 3 7 7 16 13 6 7 3 3 1 2 2 1 1 3 4 6 5 6 4 1 8 4 9 10 5 4 4 7 11 4	Open. Hide. 59 59 61 59 45 39 33 28 28 30 30 32 26 52 59 61 61 61 61 61 59 44 55 61 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 59 59 61 61 59 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 55 59 59 59 61 61 61 61 61 61 61 61 59 61 59 55 55 61 61 61 61 61 59 52 61 59 52 59 59 61 59 55 55 59 59 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 61 61 61 57 57 57 57 57 57 47 33 47 57 57 57 57 57 57 53 45 57 53 57 57 57 53 57 53 57 57 53 47 57 57 57 57 52 57 57 57 57 53 50 57 57 57 53 57 53 50 53 47 47 57 57 53 53 47 53 53 52 57 52 47 57 52 52 50 57 57 57 42 53 41 47 47 47 53 57 53 47 47 47 37 50 37 41 38 57 53 47 57 40 57 57 53 53 53 53 57 57 57 53 57 57 50 53 52 36 53 57 53 57 45 57 57 41 50 50 39 53 53 52 45 57 57 52 53 37 47 53 50 57 47 57 46 39 57 47 52 53 52 38 57 37 57 50 53 52 57 50 53 42 57 57 52 52 40 53 50 57 46 53 53 40 53 47 52 52 37 57 39 37 40 42 40 57 36 57 57 57 53 37 47 33 53 40 47 48 40 53 38 39 37 57 40 40 35 36 36 41 40 33 53 57 51 30 40 35 46 35 33 37 33 47 29 57 33 40 53 40 40 39 23 57 57 37 47 32 29 29 33 29 46 16 9 44 25 15 45 30 12 20 14 51 43 31 31 16 51 46 25 30 27 46 47 31 18 18 27 51 51 30 37 35 35 30 29 29 29 28 29 47 29 28 29 29 29 29 41 24 45 29 33 33 48 23 31 29 24 27 29 47 37 25 36 30 29 36 31 21 28 29 23 20 29 29 41 43 23 43 39 20 22 32 29 29 29 35 38 29 28 26 30 11 43 29 24 46 39 17 29 25 38 30 24 29 20 25 22 16 24 29 24 23 23 35 33 26 30 22 28 25 29 24 28 25 43 22 31 22 28 28 34 35 31 27 26 22 25 19 35 16 18 27 26 26 21 29 23 41 32 17 38 18 44 18 16 23 15 29 23 8 29 14 29 16 17 20 25 21 19 22 29 23 28 20 26 22 15 27 29 17 17 29 20 23 25 27 22 18 14 19 28 16 8 26 8 15 19 17 22 26 15 22 19 28 51 25 9 22 27 22 19 17 7 6 10 11 14 26 17 19 31 30 39 19 24 19 20 19 26 28 31 26 14 10 21 17 21 22 8 19 21 6 6 6 18 21 28 26 14 35 8 12 14 9 7 6 20 34 8 13 23 42 14 18 29 18 13 9 6 12 29 9 21 7 24 4 6 4 4 30 20 7 21 20 30 12 19 18 28 9 12 15 18 11 23 33 17 19 5 3 4 7 10 4 20 11 9 6 14 26 7 6 7 5 5 21 11 15 16 19 14 5 18 5 5 5 24 9 5 4 9 16 11 11 13 6 11 14 24 9 18 27 26 8 16 6 6 14 10 14 6 13 3 2 3 4 12 26 4 3 7 4 4 3 5 10 10 5 5 7 5 3 7 4 4 9 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr5_85242534_85243682
seq2: B6Ng01-090O08.g_70_1202

seq1  GAATTCATATGGCTCATAAAAAATTGTCATAAAGCACAAATATCTTTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATGGCTCATAAAAAATTGTCATAAAGCACAAATATCTTTTAT  50

seq1  GAATGAGAAAAGGATAAATTAACTAATAATTCTATTTCCCCTCAAAAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGAAAAGGATAAATTAACTAATAATTCTATTTCCCCTCAAAAAGA  100

seq1  GTAACAAAACATTAATTCATTACTTCATTACTTAAAATGATATATGGGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAAACATTAATTCATTACTTCATTACTTAAAATGATATATGGGTT  150

seq1  AGAATTTTTCATTCTCTAAGTATCAATAGTTGACAATAGCATTGAACAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTTTTCATTCTCTAAGTATCAATAGTTGACAATAGCATTGAACAAG  200

seq1  AGTATTGGAGTGCCCACATTCCAACTTAAAATAAATATTTTGATTTGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGGAGTGCCCACATTCCAACTTAAAATAAATATTTTGATTTGTAT  250

seq1  ATATTTTCAACATCATGAAATTATTTCATAAAACTGGAAACCCATAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTCAACATCATGAAATTATTTCATAAAACTGGAAACCCATAATTA  300

seq1  AAATGCTAAATTAAGGAAAACTAATATAAACTTAATGTATATATTCTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAAATTAAGGAAAACTAATATAAACTTAATGTATATATTCTCAA  350

seq1  AGTAATGTTGTTTGTCATGATTATAAGCTCTATCAAAAAGGTCATTGTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATGTTGTTTGTCATGATTATAAGCTCTATCAAAAAGGTCATTGTTT  400

seq1  CATTTGTTGACTAAATAATTTTAATAGGCATATTATAATTAATATTCATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTGACTAAATAATTTTAATAGGCATATTATAATTAATATTCATT  450

seq1  TCAAAATAAATGCAGACTGAATCTGAGTTAATTTTTCTTACATAAATCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAAATGCAGACTGAATCTGAGTTAATTTTTCTTACATAAATCCA  500

seq1  TTTTCTAATTTTAATCATTACTATCATATATTTTATACTTTCACATACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTAATTTTAATCATTACTATCATATATTTTATACTTTCACATACAG  550

seq1  TGAATTTGCAATGACATGTTATACCTTCTATTATGTAATCATGAGCCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGCAATGACATGTTATACCTTCTATTATGTAATCATGAGCCACT  600

seq1  TGTAGATATTAACATAAAATATAAACTGTACATTTGTTTTACAGTTAAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATATTAACATAAAATATAAACTGTACATTTGTTTTACAGTTAAAT  650

seq1  ATTCTTGAATATGCAGATAGCTATCTTTTATATTTATATATGTTTATCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGAATATGCAGATAGCTATCTTTTATATTTATATATGTTTATCAA  700

seq1  TTTTTGATCTACACTATGTTGCATCATTTTATTTACTATTTAATACTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGATCTACACTATGTTGCATCATTTTATTTACTATTTAATACTTTT  750

seq1  CTGAATTTAACAAAGGTTTGATTTTATTTGTTAAAACTATTACATGTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATTTAACAAAGGTTTGATTTTATTTGTTAAAACTATTACATGTATA  800

seq1  TACAATGAAGTACATTCACCTGACACAACTGGCCCCACTTGCTCCGGCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAATGAAGTACATTCACCTGACACAACTGGCCCCACTTGCTCCGGCCC  850

seq1  AAAGACTTAATTATTATATCTAAGTACACTGTAGCTATCTTCAGACACAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTTAATTATTATATCTAAGTACACTGTAGCTATCTTCAGACACAC  900

seq1  CAGAAGAGGGTGTCAGATTCCATTATGGATGGTTGTGAGCCGCCATGTGG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGAGGGTGTCAGATTCCATTATGGATGGTTGTGAGCCGCCATGTGG  950

seq1  TTGCTCGAATTTGAACTCAGGACCTTCTAAAGAGCAGTCAGTGCTCTTAG  1000
      ||||||||||||||||||| |||||||| |||||||||||||||||||||
seq2  TTGCTCGAATTTGAACTCA-GACCTTCT-AAGAGCAGTCAGTGCTCTTAG  998

seq1  CCATTGAGCCATCTCTCCATCCCTCAACATCCTAGAATTTATAATTGGCT  1050
       ||||||| |||||   ||||||||||||| |||||  |||||  |||| 
seq2  -CATTGAG-CATCTTCTCATCCCTCAACAT-CTAGA--TTATA--TGGC-  1040

seq1  TAATCTTGTTGAAATTGTGTGGCTATCCATAGCTGCTACTTCTGCATAGC  1100
      |||||||| ||||||||   |||||||   |||||||||||||||| |||
seq2  TAATCTTG-TGAAATTGGTGGGCTATCATAAGCTGCTACTTCTGCA-AGC  1088

seq1  TACATTAGCCCTGTCAGTTCCAGAGAATAACCTTTTACAGTACTCCTCA  1149
      ||||||||||||||||||| ||| |||||||   |||||| ||||||||
seq2  TACATTAGCCCTGTCAGTT-CAGGGAATAAC---TTACAGAACTCCTCA  1133

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information