BAC Information

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BAC

Clone NameB6Ng01-091B08
Chromosome5 (Build37)
Map Location 80,412,630 - 80,413,787
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC100039506, LOC100039384
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091B08.bB6Ng01-091B08.g
ACCDH903213DH903214
length1,1421,241
definitionDH903213|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B08, 5' end.DH903214|Mus musculus domesticus DNA, BAC clone: B6Ng01-091B08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctatggactttttctaaggtttgtgagaaaaatataaaggaatat
ttgaaaaattatttgaaattacacacacacacacacacacacaaaaacac
acatatatattacacacacacaattacattacattcttgcttagtagtat
gctgatgacctgctggacttaccggataaataccaaaaactagtatctga
catttatttaagtcacaggaccaagtctaggtcatagagagttcactggt
ctcaagaaaaatcttttaacttcctcaatcatgaatgtttatcaataatg
ggtttattttatctgtaataggaacttaaattagttcctagacctataga
aagagttgttatagaggaaattgccccatcaaggcttttatcaaaaatac
taaaattgcttaagatagtctattaaaacaatatcaaaagttagaatcga
tgatagattgtgattttgtcaggctttgatagtttggtgcttatggccat
tgttaagaattatgcataaatgtcatctataagttgagtgaattcaggta
tatgatatgtgctatctgaagtataaacaatcaggaatagtgaatgttac
attatgaaaatggtgccttcgttggaattactctgtctttgaaatgtggt
atattgaaatagatatggcaaacacgaatcaaaaacactaaaaatattca
ctattattcatgatggataataacatgaatttcttttttttaaatctata
atagttttttaattaggtatttattcatttacatttccaatgctatccca
aaagtcccccacacgcttttccacccactcccccaactacccactcccac
ttcttggccctggcgttcccctgtactgaggcatataaagtttgcacgaa
caatgggcctttctttccactgatggccaactaggccatcttctgataca
tatgcagctagagacacgagctctggtggggtactggttagttcatattg
tgttcctctatagggtgcagatcccccagctcttcggtactttttctagc
tcctccatggggcctgtgatcaatcatactgattgtaagcatcagttctt
gtgtttctagcccgcatagtctcacaagagagagcttatcag
gaattcaaatcgatccattctaatctctttgtactaaggtcaaatctaag
tggatcaaggaactccacataaaaccagagacactgaaacttatagagga
gaaagtagggaaaagcctcaaagatatgggtacaggggaaaaattcctga
atagaatagcaatggcttgtgctgtaagatcaagaattgataaatgggac
ctcataaaattgcaaagcttctgcaaagcaaaagacaccgtcaataagac
aaaaagaccaccaacagattgggaaaggatctttacatatcccaaatcgg
atagggaactaatatccaatatatatatataaagaactcaagaaggtgga
gtccagaaaatcgaataaccccattaaaaaatggggctctgacctgaaca
aagaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaa
cgttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgag
attccacctcacaccagtcagaatggctaagatcaaaaattcaggtgaca
gcagatgctggcaaggatgtggagaaagaggaacactcctccattgtcgg
tgggattgcaagcttgtacaaccactctggaaatcagtctggcggttcct
cagaaaattggacatagtactaccgtaggatccggcaatacctctcctgg
gcatatatccagaagatggtaagtaggacacatgctccactatattcata
gcagccttatttataatagccagaagctggaaagaatccagatgcccctc
aacagaggaatggatacagaaaatgttgtacatgtacacaatggaatact
actcagctattaaaaaaatgaatttatgtaattcctaggcaaatggatgg
acctggagggtatcatcctgagtgaggtaacccaattacaaaggactcgc
acatatgtactcactgatagtggatattagcccagaaactttggatccca
gatatagatcatttgttaaactcatgaaactcagagagagaccaagtggt
ggacacttgctcctcctagaatgggaacaaacacccatggaaggattaca
agacaacttgagcctgtgacgaagattgaaccactctatgattggcattt
cagaatccactctaatccaacgtgacccatgcatacctagcagaattgct
gagaccggatatgctgtggttcttgtggagacatatatcgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr5_80412630_80413787
seq2: B6Ng01-091B08.b_46_1187

seq1  GAATTCTATGGACTTTTTCTAAGGTTTGTGAGAAAAATATAAAGGAATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGACTTTTTCTAAGGTTTGTGAGAAAAATATAAAGGAATAT  50

seq1  TTGAAAAATTATTTGAAATTACACACACACACACACACACACAAAAACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAAATTATTTGAAATTACACACACACACACACACACACAAAAACAC  100

seq1  ACATATATATTACACACACACAATTACATTACATTCTTGCTTAGTAGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATATTACACACACACAATTACATTACATTCTTGCTTAGTAGTAT  150

seq1  GCTGATGACCTGCTGGACTTACCGGATAAATACCAAAAACTAGTATCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGACCTGCTGGACTTACCGGATAAATACCAAAAACTAGTATCTGA  200

seq1  CATTTATTTAAGTCACAGGACCAAGTCTAGGTCATAGAGAGTTCACTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATTTAAGTCACAGGACCAAGTCTAGGTCATAGAGAGTTCACTGGT  250

seq1  CTCAAGAAAAATCTTTTAACTTCCTCAATCATGAATGTTTATCAATAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAAAATCTTTTAACTTCCTCAATCATGAATGTTTATCAATAATG  300

seq1  GGTTTATTTTATCTGTAATAGGAACTTAAATTAGTTCCTAGACCTATAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTATTTTATCTGTAATAGGAACTTAAATTAGTTCCTAGACCTATAGA  350

seq1  AAGAGTTGTTATAGAGGAAATTGCCCCATCAAGGCTTTTATCAAAAATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTGTTATAGAGGAAATTGCCCCATCAAGGCTTTTATCAAAAATAC  400

seq1  TAAAATTGCTTAAGATAGTCTATTAAAACAATATCAAAAGTTAGAATCGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTGCTTAAGATAGTCTATTAAAACAATATCAAAAGTTAGAATCGA  450

seq1  TGATAGATTGTGATTTTGTCAGGCTTTGATAGTTTGGTGCTTATGGCCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGATTGTGATTTTGTCAGGCTTTGATAGTTTGGTGCTTATGGCCAT  500

seq1  TGTTAAGAATTATGCATAAATGTCATCTATAAGTTGAGTGAATTCAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAAGAATTATGCATAAATGTCATCTATAAGTTGAGTGAATTCAGGTA  550

seq1  TATGATATGTGCTATCTGAAGTATAAACAATCAGGAATAGTGAATGTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATATGTGCTATCTGAAGTATAAACAATCAGGAATAGTGAATGTTAC  600

seq1  ATTATGAAAATGGTGCCTTCGTTGGAATTACTCTGTCTTTGAAATGTGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAAATGGTGCCTTCGTTGGAATTACTCTGTCTTTGAAATGTGGT  650

seq1  ATATTGAAATAGATATGGCAAACACGAATCAAAAACACTAAAAATATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAAATAGATATGGCAAACACGAATCAAAAACACTAAAAATATTCA  700

seq1  CTATTATTCATGATGGATAATAACATGAATTTCTTTTTTTTAAATCTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATTCATGATGGATAATAACATGAATTTCTTTTTTTTAAATCTATA  750

seq1  ATAGTTTTTTAATTAGGTATTTATTCATTTACATTTCCAATGCTATCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTTTTTAATTAGGTATTTATTCATTTACATTTCCAATGCTATCCCA  800

seq1  AAAGTCCCCCACACGCTTTTCCACCCACTCCCCCAACTACCCACTCCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCCCCACACGCTTTTCCACCCACTCCCCCAACTACCCACTCCCAC  850

seq1  TTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCACGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGGCCCTGGCGTTCCCCTGTACTGAGGCATATAAAGTTTGCACGAA  900

seq1  CAATGGGCCTTTCTTTCCACTGATGGCCAACTAGGCCATCTTCTGATACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGGCCTTTCTTTCCACTGATGGCCAACTAGGCCATCTTCTGATACA  950

seq1  TATGCAGCTAGAGACACGAGCTCTGGTGGGGTACTGGTTAGTTCATATTG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAGCTAGAGACACGAGCTCTGGTGGGGTACTGGTTAGTTCATATTG  1000

seq1  TTGTTCCTCCTATAGGGTTGCAGATCCCCCCAGCTCCTTCGGTACTTTTT  1050
       ||||||| |||||||| ||||||| ||||||||| ||||||||||||||
seq2  -TGTTCCT-CTATAGGG-TGCAGAT-CCCCCAGCT-CTTCGGTACTTTTT  1045

seq1  CTAGCTCCTCCATTGGGGGCCCTGTGATCCATCCAATAGCTGAATGTGAG  1100
      |||||||||||||   ||| ||||||||| |||  ||| |||| ||| ||
seq2  CTAGCTCCTCCAT---GGGGCCTGTGATCAATC--ATA-CTGATTGTAAG  1089

seq1  CATCCAGTTCTGTGT-TTTCTAGGCCCCGGCATAGTCTCACAAGAGAGAG  1149
      ||| ||||||| ||| |||||||   || |||||||||||||||||||||
seq2  CAT-CAGTTCT-TGTGTTTCTAG---CCCGCATAGTCTCACAAGAGAGAG  1134

seq1  CTATATCAG  1158
      || ||||||
seq2  CT-TATCAG  1142